RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 PIFOQ8TCI5 191 aa9.82□□□□□ -0.84
USP11-204ENST00000377107 FAM223BA6NKX1 122 aa9.82□□□□□ -0.84
USP11-204ENST00000377107 OCIAD2Q56VL3 154 aa9.82□□□□□ -0.84
USP11-204ENST00000377107 SCGB1D4Q6XE38 83 aa9.82□□□□□ -0.84
USP11-204ENST00000377107 FAM223AQ8IWN6 122 aa9.82□□□□□ -0.84
USP11-204ENST00000377107 RBAKDNA6NC62 111 aa9.82□□□□□ -0.84
USP11-204ENST00000377107 TGFAP01135 160 aa9.82□□□□□ -0.84
USP11-204ENST00000377107 FABP2P12104 132 aa9.82□□□□□ -0.84
USP11-204ENST00000377107 LINC00477Q96M19 166 aa9.82□□□□□ -0.84
USP11-204ENST00000377107 MTORP42345 2549 aa9.81□□□□□ -0.84
USP11-204ENST00000377107 TRBV25-1A0A075B6N4 114 aa9.81□□□□□ -0.84
USP11-204ENST00000377107 IGHV4-59P01825 116 aa9.81□□□□□ -0.84
USP11-204ENST00000377107 CD300EQ496F6 205 aaPredicted RBP9.81□□□□□ -0.84
USP11-204ENST00000377107 C9orf47Q6ZRZ4 202 aa9.81□□□□□ -0.84
USP11-204ENST00000377107 CSTL1Q9H114 145 aa9.81□□□□□ -0.84
USP11-204ENST00000377107 CSMD2Q7Z408 3487 aa9.81□□□□□ -0.84
USP11-204ENST00000377107 IGSF10Q6WRI0 2623 aa9.81□□□□□ -0.84
USP11-204ENST00000377107 AVPP01185 164 aa9.81□□□□□ -0.84
USP11-204ENST00000377107 SUMO2P61956 95 aaKnown RBP9.81□□□□□ -0.84
USP11-204ENST00000377107 MEGF9Q9H1U4 602 aa9.81□□□□□ -0.84
USP11-204ENST00000377107 CYSLTR1Q9Y271 337 aa9.81□□□□□ -0.84
USP11-204ENST00000377107 C9orf118A6NHY6 69 aa9.81□□□□□ -0.84
USP11-204ENST00000377107 MSMBP08118 114 aa9.81□□□□□ -0.84
USP11-204ENST00000377107 RBX1P62877 108 aa9.81□□□□□ -0.84
USP11-204ENST00000377107 SMIM2Q9BVW6 85 aa9.81□□□□□ -0.84
USP11-204ENST00000377107 KLK9Q9UKQ9 250 aa9.81□□□□□ -0.84
USP11-204ENST00000377107 SAMD5Q5TGI4 173 aa9.8□□□□□ -0.84
USP11-204ENST00000377107 MAPKAPK5-AS1Q8N8E1 139 aa9.8□□□□□ -0.84
USP11-204ENST00000377107 OR11H12B2RN74 326 aa9.8□□□□□ -0.84
USP11-204ENST00000377107 ZFAND2AQ8N6M9 145 aa9.8□□□□□ -0.84
USP11-204ENST00000377107 OR11H1Q8NG94 326 aa9.8□□□□□ -0.84
USP11-204ENST00000377107 OR11H2Q8NH07 326 aa9.8□□□□□ -0.84
USP11-204ENST00000377107 CHTOPQ9Y3Y2 248 aaKnown RBP9.8□□□□□ -0.84
USP11-204ENST00000377107 NDUFA4O00483 81 aa9.79□□□□□ -0.84
USP11-204ENST00000377107 OVOL1O14753 267 aa9.79□□□□□ -0.84
USP11-204ENST00000377107 NRACQ8N912 160 aa9.79□□□□□ -0.84
USP11-204ENST00000377107 DPH3P1Q9H4G8 78 aa9.79□□□□□ -0.84
USP11-204ENST00000377107 JMJD1CQ15652 2540 aa9.79□□□□□ -0.84
USP11-204ENST00000377107 IGHV3-73A0A0B4J1V6 119 aa9.79□□□□□ -0.84
USP11-204ENST00000377107 ZNF56Q15929 161 aa9.79□□□□□ -0.84
USP11-204ENST00000377107 C2orf66Q6UXQ4 117 aa9.79□□□□□ -0.84
USP11-204ENST00000377107 TMEM190Q8WZ59 177 aa9.79□□□□□ -0.84
USP11-204ENST00000377107 DAZ1Q9NQZ3 744 aaKnown RBP9.79□□□□□ -0.84
USP11-204ENST00000377107 H3BRM9 83 aa9.79□□□□□ -0.84
USP11-204ENST00000377107 K7ERU9 68 aa9.79□□□□□ -0.84
USP11-204ENST00000377107 PRB1P04280 392 aa9.79□□□□□ -0.84
USP11-204ENST00000377107 SYNJ2BPP57105 145 aa9.79□□□□□ -0.84
USP11-204ENST00000377107 SRSF9Q13242 221 aaKnown RBP eCLIP9.79□□□□□ -0.84
USP11-204ENST00000377107 ADAMTSL5Q6ZMM2 481 aa9.79□□□□□ -0.84
USP11-204ENST00000377107 HHLA3Q9XRX5 114 aa9.79□□□□□ -0.84
USP11-204ENST00000377107 ACANP16112 2415 aa9.78□□□□□ -0.84
USP11-204ENST00000377107 SPINK13Q1W4C9 94 aa9.78□□□□□ -0.84
USP11-204ENST00000377107 GPHB5Q86YW7 130 aa9.78□□□□□ -0.84
USP11-204ENST00000377107 C10orf105Q8TEF2 133 aa9.78□□□□□ -0.84
USP11-204ENST00000377107 SPOCK3Q9BQ16 436 aa9.78□□□□□ -0.84
USP11-204ENST00000377107 IGHV3-64A0A075B6Q5 118 aa9.78□□□□□ -0.84
USP11-204ENST00000377107 AMTNQ6UX39 209 aa9.78□□□□□ -0.84
USP11-204ENST00000377107 COX8CQ7Z4L0 72 aa9.78□□□□□ -0.84
USP11-204ENST00000377107 CNFNQ9BYD5 112 aa9.78□□□□□ -0.84
USP11-204ENST00000377107 ARL6IP6Q8N6S5 226 aa9.77□□□□□ -0.84
USP11-204ENST00000377107 RASL10AQ92737 203 aa9.77□□□□□ -0.84
USP11-204ENST00000377107 PRRC2AP48634 2157 aaKnown RBP9.77□□□□□ -0.85
USP11-204ENST00000377107 ID1P41134 155 aa9.77□□□□□ -0.85
USP11-204ENST00000377107 DEFB112Q30KQ8 113 aa9.77□□□□□ -0.85
USP11-204ENST00000377107 TMEM170BQ5T4T1 132 aa9.77□□□□□ -0.85
USP11-204ENST00000377107 RPL39P62891 51 aaKnown RBP9.77□□□□□ -0.85
USP11-204ENST00000377107 KLHL30-AS1Q8NEE0 82 aa9.77□□□□□ -0.85
USP11-204ENST00000377107 DUX3Q96PT4 197 aa9.77□□□□□ -0.85
USP11-204ENST00000377107 USMG5Q96IX5 58 aa9.76□□□□□ -0.85
USP11-204ENST00000377107 A0A087WX48 190 aa9.76□□□□□ -0.85
USP11-204ENST00000377107 DUSP14O95147 198 aaKnown RBP9.76□□□□□ -0.85
USP11-204ENST00000377107 IGHG2P01859 326 aa9.76□□□□□ -0.85
USP11-204ENST00000377107 DEFB136Q30KP8 78 aa9.76□□□□□ -0.85
USP11-204ENST00000377107 C11orf44Q8N8P7 122 aa9.76□□□□□ -0.85
USP11-204ENST00000377107 U3KQE9 123 aa9.76□□□□□ -0.85
USP11-204ENST00000377107 A0A1W2PPM0 123 aa9.76□□□□□ -0.85
USP11-204ENST00000377107 H7C1H1 209 aa9.76□□□□□ -0.85
USP11-204ENST00000377107 ORMDL2Q53FV1 153 aa9.76□□□□□ -0.85
USP11-204ENST00000377107 BEX4Q9NWD9 120 aaPredicted RBP9.76□□□□□ -0.85
USP11-204ENST00000377107 APOMO95445 188 aa9.75□□□□□ -0.85
USP11-204ENST00000377107 SMPXQ9UHP9 88 aa9.75□□□□□ -0.85
USP11-204ENST00000377107 TP53TG1Q9Y2A0 90 aa9.75□□□□□ -0.85
USP11-204ENST00000377107 PRSS29PA6NIE9 313 aa9.75□□□□□ -0.85
USP11-204ENST00000377107 IGLV2-18A0A075B6J9 118 aa9.74□□□□□ -0.85
USP11-204ENST00000377107 ZNF815PA8K554 130 aa9.74□□□□□ -0.85
USP11-204ENST00000377107 B4DSR2 109 aa9.74□□□□□ -0.85
USP11-204ENST00000377107 PRM2P04554 102 aa9.74□□□□□ -0.85
USP11-204ENST00000377107 MRPL53Q96EL3 112 aaKnown RBP9.74□□□□□ -0.85
USP11-204ENST00000377107 MRAP2Q96G30 205 aa9.74□□□□□ -0.85
USP11-204ENST00000377107 LOC107984156A0A0G2JMH3 177 aa9.74□□□□□ -0.85
USP11-204ENST00000377107 SRSF2Q01130 221 aaKnown RBP9.74□□□□□ -0.85
USP11-204ENST00000377107 ARL17AQ8IVW1 177 aa9.74□□□□□ -0.85
USP11-204ENST00000377107 F8VRH5 84 aa9.74□□□□□ -0.85
USP11-204ENST00000377107 K7EP34 96 aa9.74□□□□□ -0.85
USP11-204ENST00000377107 MDFICQ9P1T7 246 aa9.74□□□□□ -0.85
USP11-204ENST00000377107 A6NDX4 124 aa9.73□□□□□ -0.85
USP11-204ENST00000377107 KNCNA6PVL3 124 aa9.73□□□□□ -0.85
USP11-204ENST00000377107 RNASE3P12724 160 aaKnown RBP9.73□□□□□ -0.85
USP11-204ENST00000377107 SLC25A16P16260 332 aa9.73□□□□□ -0.85
USP11-204ENST00000377107 KIR2DL4Q99706 377 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms