RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 PDZD2O15018 2839 aa16.18■□□□□ 0.18
RNF39-202ENST00000376751 PRSS47A8MTI9 375 aa16.18■□□□□ 0.18
RNF39-202ENST00000376751 SNRPD3P62318 126 aaKnown RBP16.18■□□□□ 0.18
RNF39-202ENST00000376751 HIST2H2BDQ6DRA6 164 aa16.18■□□□□ 0.18
RNF39-202ENST00000376751 DEFB125Q8N687 156 aa16.18■□□□□ 0.18
RNF39-202ENST00000376751 MRAP2Q96G30 205 aa16.18■□□□□ 0.18
RNF39-202ENST00000376751 C18orf15Q96N68 181 aa16.18■□□□□ 0.18
RNF39-202ENST00000376751 TRAV12-3A0A0B4J271 114 aa16.17■□□□□ 0.18
RNF39-202ENST00000376751 IGKV3-20P01619 116 aa16.17■□□□□ 0.18
RNF39-202ENST00000376751 C14orf178Q8N769 122 aaPredicted RBP16.17■□□□□ 0.18
RNF39-202ENST00000376751 TMEM158Q8WZ71 300 aa16.17■□□□□ 0.18
RNF39-202ENST00000376751 STPG4Q8N801 248 aa16.17■□□□□ 0.18
RNF39-202ENST00000376751 C7orf71A4D174 169 aa16.16■□□□□ 0.18
RNF39-202ENST00000376751 NXPH4O95158 308 aa16.16■□□□□ 0.18
RNF39-202ENST00000376751 ODF3Q96PU9 254 aa16.16■□□□□ 0.18
RNF39-202ENST00000376751 DPH3P1Q9H4G8 78 aa16.16■□□□□ 0.18
RNF39-202ENST00000376751 DUX3Q96PT4 197 aa16.15■□□□□ 0.18
RNF39-202ENST00000376751 TRAV12-2A0A075B6T6 113 aa16.15■□□□□ 0.18
RNF39-202ENST00000376751 TCAPO15273 167 aa16.15■□□□□ 0.18
RNF39-202ENST00000376751 CD5LO43866 347 aa16.15■□□□□ 0.18
RNF39-202ENST00000376751 HINT1P49773 126 aaPredicted RBP16.15■□□□□ 0.18
RNF39-202ENST00000376751 RASL10AQ92737 203 aa16.15■□□□□ 0.18
RNF39-202ENST00000376751 HELZ2Q9BYK8 2649 aaKnown RBP16.14■□□□□ 0.17
RNF39-202ENST00000376751 ANKRD39Q53RE8 183 aa16.14■□□□□ 0.17
RNF39-202ENST00000376751 SLC25A34Q6PIV7 304 aa16.14■□□□□ 0.17
RNF39-202ENST00000376751 FAM159AQ6UWV7 190 aa16.14■□□□□ 0.17
RNF39-202ENST00000376751 PLA2G2AP14555 144 aa16.13■□□□□ 0.17
RNF39-202ENST00000376751 COL5A1-AS1Q5SY13 56 aa16.13■□□□□ 0.17
RNF39-202ENST00000376751 RPL39LQ96EH5 51 aaKnown RBP16.13■□□□□ 0.17
RNF39-202ENST00000376751 MGPP08493 103 aa16.13■□□□□ 0.17
RNF39-202ENST00000376751 DKK2Q9UBU2 259 aa16.13■□□□□ 0.17
RNF39-202ENST00000376751 ITPR2Q14571 2701 aa16.12■□□□□ 0.17
RNF39-202ENST00000376751 DNAJC9-AS1A6NH13 148 aa16.12■□□□□ 0.17
RNF39-202ENST00000376751 LINC01619G3V211 115 aa16.12■□□□□ 0.17
RNF39-202ENST00000376751 Q6ZSV7 163 aa16.12■□□□□ 0.17
RNF39-202ENST00000376751 TMEM86BQ8N661 226 aa16.12■□□□□ 0.17
RNF39-202ENST00000376751 C4orf3Q8WVX3 66 aa16.12■□□□□ 0.17
RNF39-202ENST00000376751 AP1S3Q96PC3 154 aa16.12■□□□□ 0.17
RNF39-202ENST00000376751 SMIM2Q9BVW6 85 aa16.12■□□□□ 0.17
RNF39-202ENST00000376751 LAGE3Q14657 143 aa16.11■□□□□ 0.17
RNF39-202ENST00000376751 OR11H1Q8NG94 326 aa16.11■□□□□ 0.17
RNF39-202ENST00000376751 NF1P21359 2839 aa16.11■□□□□ 0.17
RNF39-202ENST00000376751 ACANP16112 2415 aa16.11■□□□□ 0.17
RNF39-202ENST00000376751 CD7P09564 240 aa16.11■□□□□ 0.17
RNF39-202ENST00000376751 KRTAP1-1Q07627 177 aa16.11■□□□□ 0.17
RNF39-202ENST00000376751 SPINK13Q1W4C9 94 aa16.11■□□□□ 0.17
RNF39-202ENST00000376751 KHDC1LQ5JSQ8 128 aa16.11■□□□□ 0.17
RNF39-202ENST00000376751 DPF1Q92782 380 aa16.11■□□□□ 0.17
RNF39-202ENST00000376751 KIF25-AS1Q9Y6Z4 181 aa16.11■□□□□ 0.17
RNF39-202ENST00000376751 AMTNQ6UX39 209 aa16.1■□□□□ 0.17
RNF39-202ENST00000376751 JPT2Q9H910 190 aa16.1■□□□□ 0.17
RNF39-202ENST00000376751 SMIM17P0DL12 118 aa16.09■□□□□ 0.17
RNF39-202ENST00000376751 COX8AP10176 69 aa16.09■□□□□ 0.17
RNF39-202ENST00000376751 LINC00315P59091 139 aa16.09■□□□□ 0.17
RNF39-202ENST00000376751 ODF1Q14990 250 aa16.09■□□□□ 0.17
RNF39-202ENST00000376751 FOXI2Q6ZQN5 318 aa16.09■□□□□ 0.17
RNF39-202ENST00000376751 POM121L12Q8N7R1 296 aa16.09■□□□□ 0.17
RNF39-202ENST00000376751 ESM1Q9NQ30 184 aa16.09■□□□□ 0.17
RNF39-202ENST00000376751 IGHV3-16A0A0C4DH30 117 aa16.08■□□□□ 0.16
RNF39-202ENST00000376751 G0S2P27469 103 aa16.08■□□□□ 0.16
RNF39-202ENST00000376751 CDKN1BP46527 198 aa16.08■□□□□ 0.16
RNF39-202ENST00000376751 TCTAP57738 103 aa16.08■□□□□ 0.16
RNF39-202ENST00000376751 SUMO2P61956 95 aaKnown RBP16.08■□□□□ 0.16
RNF39-202ENST00000376751 OR1N2Q8NGR9 330 aa16.08■□□□□ 0.16
RNF39-202ENST00000376751 KLHL30-AS1Q8NEE0 82 aa16.07■□□□□ 0.16
RNF39-202ENST00000376751 KNCNA6PVL3 124 aa16.07■□□□□ 0.16
RNF39-202ENST00000376751 J3QKU1 62 aa16.07■□□□□ 0.16
RNF39-202ENST00000376751 DUSP14O95147 198 aaKnown RBP16.07■□□□□ 0.16
RNF39-202ENST00000376751 FGF6P10767 208 aa16.07■□□□□ 0.16
RNF39-202ENST00000376751 OR9G4Q8NGQ1 327 aa16.07■□□□□ 0.16
RNF39-202ENST00000376751 DLX4Q92988 240 aaPredicted RBP16.07■□□□□ 0.16
RNF39-202ENST00000376751 C9orf85Q96MD7 179 aa16.07■□□□□ 0.16
RNF39-202ENST00000376751 MDFICQ9P1T7 246 aa16.07■□□□□ 0.16
RNF39-202ENST00000376751 ZNF25P17030 456 aaPredicted RBP16.06■□□□□ 0.16
RNF39-202ENST00000376751 C20orf78Q9BR46 151 aa16.06■□□□□ 0.16
RNF39-202ENST00000376751 MPV17L2Q567V2 206 aa16.06■□□□□ 0.16
RNF39-202ENST00000376751 C2orf91Q6ZV80 131 aa16.06■□□□□ 0.16
RNF39-202ENST00000376751 TMEM61Q8N0U2 210 aa16.06■□□□□ 0.16
RNF39-202ENST00000376751 Q8N1Y9 231 aa16.06■□□□□ 0.16
RNF39-202ENST00000376751 FOXC2Q99958 501 aa16.06■□□□□ 0.16
RNF39-202ENST00000376751 ZMAT4Q9H898 229 aa16.06■□□□□ 0.16
RNF39-202ENST00000376751 UNC79Q9P2D8 2635 aa16.05■□□□□ 0.16
RNF39-202ENST00000376751 PRSS1P07477 247 aa16.05■□□□□ 0.16
RNF39-202ENST00000376751 TEX29Q8N6K0 151 aa16.05■□□□□ 0.16
RNF39-202ENST00000376751 IGHV1OR15-1A0A075B7D0 117 aa16.04■□□□□ 0.16
RNF39-202ENST00000376751 DEFB131AP59861 70 aa16.04■□□□□ 0.16
RNF39-202ENST00000376751 A0A087WWL8 130 aa16.04■□□□□ 0.16
RNF39-202ENST00000376751 NUDT3O95989 172 aa16.04■□□□□ 0.16
RNF39-202ENST00000376751 ZNF124Q15973 351 aa16.04■□□□□ 0.16
RNF39-202ENST00000376751 PEMTQ9UBM1 199 aa16.04■□□□□ 0.16
RNF39-202ENST00000376751 ANK3Q12955 4377 aaKnown RBP16.03■□□□□ 0.16
RNF39-202ENST00000376751 ATP5LO75964 103 aa16.03■□□□□ 0.16
RNF39-202ENST00000376751 RBMY1A1P0DJD3 496 aaKnown RBP16.03■□□□□ 0.16
RNF39-202ENST00000376751 RBMY1CP0DJD4 496 aa16.03■□□□□ 0.16
RNF39-202ENST00000376751 RBMY1FQ15415 496 aaKnown RBP16.03■□□□□ 0.16
RNF39-202ENST00000376751 SUMO4Q6EEV6 95 aa16.02■□□□□ 0.16
RNF39-202ENST00000376751 TMEM208Q9BTX3 173 aa16.02■□□□□ 0.16
RNF39-202ENST00000376751 MTORP42345 2549 aa16.02■□□□□ 0.16
RNF39-202ENST00000376751 RBMY1BA6NDE4 496 aaKnown RBP16.02■□□□□ 0.15
RNF39-202ENST00000376751 RBMY1EA6NEQ0 496 aaKnown RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms