RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 FAM74A7A6NL05 159 aa14.2□□□□□ -0.14
VSX1-201ENST00000376707 RS1O15537 224 aa14.2□□□□□ -0.14
VSX1-201ENST00000376707 IFNA7P01567 189 aa14.2□□□□□ -0.14
VSX1-201ENST00000376707 RNASE3P12724 160 aaKnown RBP14.2□□□□□ -0.14
VSX1-201ENST00000376707 CFAP126Q5VTH2 177 aa14.2□□□□□ -0.14
VSX1-201ENST00000376707 HIST1H2BAQ96A08 127 aa14.2□□□□□ -0.14
VSX1-201ENST00000376707 ARL2-SNX15V9GYD0 113 aa14.2□□□□□ -0.14
VSX1-201ENST00000376707 IGHV3-73A0A0B4J1V6 119 aa14.19□□□□□ -0.14
VSX1-201ENST00000376707 TRAV34A0A0B4J273 112 aa14.19□□□□□ -0.14
VSX1-201ENST00000376707 EPM2AB3EWF7 344 aa14.19□□□□□ -0.14
VSX1-201ENST00000376707 PEX7O00628 323 aa14.19□□□□□ -0.14
VSX1-201ENST00000376707 FGF8P55075 233 aaPredicted RBP14.19□□□□□ -0.14
VSX1-201ENST00000376707 UBE2G2P60604 165 aa14.19□□□□□ -0.14
VSX1-201ENST00000376707 RHOHQ15669 191 aa14.19□□□□□ -0.14
VSX1-201ENST00000376707 DPPA3Q6W0C5 159 aa14.19□□□□□ -0.14
VSX1-201ENST00000376707 TRAV8-6A0A0B4J262 113 aa14.18□□□□□ -0.14
VSX1-201ENST00000376707 TRBV6-4A0A1B0GX49 114 aa14.18□□□□□ -0.14
VSX1-201ENST00000376707 MAP1LC3B2A6NCE7 125 aa14.18□□□□□ -0.14
VSX1-201ENST00000376707 PSCAO43653 123 aa14.18□□□□□ -0.14
VSX1-201ENST00000376707 ZNF345Q14585 488 aa14.18□□□□□ -0.14
VSX1-201ENST00000376707 MAP1LC3BQ9GZQ8 125 aa14.18□□□□□ -0.14
VSX1-201ENST00000376707 IGKV3D-20A0A0C4DH25 116 aa14.17□□□□□ -0.14
VSX1-201ENST00000376707 SMLR1H3BR10 107 aa14.17□□□□□ -0.14
VSX1-201ENST00000376707 LINC01556Q5JQF7 62 aa14.17□□□□□ -0.14
VSX1-201ENST00000376707 OR10J3Q5JRS4 329 aa14.17□□□□□ -0.14
VSX1-201ENST00000376707 ZNF506Q5JVG8 444 aa14.17□□□□□ -0.14
VSX1-201ENST00000376707 COX8CQ7Z4L0 72 aa14.17□□□□□ -0.14
VSX1-201ENST00000376707 Q86TA4 180 aa14.17□□□□□ -0.14
VSX1-201ENST00000376707 BOLA1Q9Y3E2 137 aa14.17□□□□□ -0.14
VSX1-201ENST00000376707 PGPEP1LA6NFU8 196 aa14.16□□□□□ -0.14
VSX1-201ENST00000376707 FABP5P3A8MUU1 101 aa14.16□□□□□ -0.14
VSX1-201ENST00000376707 XGP55808 180 aa14.16□□□□□ -0.14
VSX1-201ENST00000376707 KRTAP10-1P60331 282 aa14.16□□□□□ -0.14
VSX1-201ENST00000376707 KCNRGQ8N5I3 272 aa14.16□□□□□ -0.14
VSX1-201ENST00000376707 MGST1P10620 155 aaKnown RBP14.15□□□□□ -0.14
VSX1-201ENST00000376707 FHITP49789 147 aa14.15□□□□□ -0.14
VSX1-201ENST00000376707 PIK3CD-AS1Q5SR53 167 aa14.15□□□□□ -0.14
VSX1-201ENST00000376707 TCEAL7Q9BRU2 100 aa14.15□□□□□ -0.14
VSX1-201ENST00000376707 HMSDA8MTL9 139 aa14.14□□□□□ -0.15
VSX1-201ENST00000376707 GCSHP23434 173 aa14.14□□□□□ -0.15
VSX1-201ENST00000376707 ZFP30Q9Y2G7 519 aa14.14□□□□□ -0.15
VSX1-201ENST00000376707 IBA57-AS1B1ANH7 110 aa14.13□□□□□ -0.15
VSX1-201ENST00000376707 S100A4P26447 101 aaKnown RBP14.13□□□□□ -0.15
VSX1-201ENST00000376707 CRIP1P50238 77 aa14.13□□□□□ -0.15
VSX1-201ENST00000376707 LELP1Q5T871 98 aa14.13□□□□□ -0.15
VSX1-201ENST00000376707 STOML3Q8TAV4 291 aa14.13□□□□□ -0.15
VSX1-201ENST00000376707 FMC1Q96HJ9 113 aa14.13□□□□□ -0.15
VSX1-201ENST00000376707 Q9HAA7 133 aa14.13□□□□□ -0.15
VSX1-201ENST00000376707 TRBV6-1A0A0K0K1D8 114 aa14.12□□□□□ -0.15
VSX1-201ENST00000376707 IGHV3-30P01768 117 aa14.12□□□□□ -0.15
VSX1-201ENST00000376707 IGHV3-33P01772 117 aa14.12□□□□□ -0.15
VSX1-201ENST00000376707 SEC11BP0C7V7 166 aa14.12□□□□□ -0.15
VSX1-201ENST00000376707 IGHV3-30-3P0DP02 117 aa14.12□□□□□ -0.15
VSX1-201ENST00000376707 IGHV3-30-5P0DP03 117 aa14.12□□□□□ -0.15
VSX1-201ENST00000376707 ASIPP42127 132 aa14.12□□□□□ -0.15
VSX1-201ENST00000376707 DNLZQ5SXM8 178 aa14.12□□□□□ -0.15
VSX1-201ENST00000376707 ZFP2Q6ZN57 461 aa14.12□□□□□ -0.15
VSX1-201ENST00000376707 OR11H4Q8NGC9 324 aa14.12□□□□□ -0.15
VSX1-201ENST00000376707 ATP6V0E2Q8NHE4 81 aa14.12□□□□□ -0.15
VSX1-201ENST00000376707 ZC2HC1AQ96GY0 325 aa14.12□□□□□ -0.15
VSX1-201ENST00000376707 GTSF1LQ9H1H1 148 aa14.12□□□□□ -0.15
VSX1-201ENST00000376707 IL36BQ9NZH7 164 aa14.12□□□□□ -0.15
VSX1-201ENST00000376707 A8MWV9 139 aa14.11□□□□□ -0.15
VSX1-201ENST00000376707 UMAD1C9J7I0 102 aa14.11□□□□□ -0.15
VSX1-201ENST00000376707 IGLV5-52A0A0A0MRZ9 124 aa14.1□□□□□ -0.15
VSX1-201ENST00000376707 A0A0D9SG52 128 aa14.1□□□□□ -0.15
VSX1-201ENST00000376707 LRCOL1A6NCL2 159 aa14.1□□□□□ -0.15
VSX1-201ENST00000376707 KRBOX1C9JBD0 128 aa14.1□□□□□ -0.15
VSX1-201ENST00000376707 LGALSLQ3ZCW2 172 aaPredicted RBP14.1□□□□□ -0.15
VSX1-201ENST00000376707 MBD3L1Q8WWY6 194 aa14.1□□□□□ -0.15
VSX1-201ENST00000376707 FRZBQ92765 325 aa14.1□□□□□ -0.15
VSX1-201ENST00000376707 PARLQ9H300 379 aa14.1□□□□□ -0.15
VSX1-201ENST00000376707 B4DEV8 164 aa14.09□□□□□ -0.15
VSX1-201ENST00000376707 LTAP01374 205 aa14.09□□□□□ -0.15
VSX1-201ENST00000376707 UBE2G1P62253 170 aa14.09□□□□□ -0.15
VSX1-201ENST00000376707 FAM162BQ5T6X4 162 aa14.09□□□□□ -0.15
VSX1-201ENST00000376707 CST9LP1Q5W188 147 aa14.09□□□□□ -0.15
VSX1-201ENST00000376707 NTN5Q8WTR8 489 aaPredicted RBP14.09□□□□□ -0.15
VSX1-201ENST00000376707 BCL2L11O43521 198 aa14.08□□□□□ -0.16
VSX1-201ENST00000376707 SH2D1AO60880 128 aa14.08□□□□□ -0.16
VSX1-201ENST00000376707 ZNF674Q2M3X9 581 aa14.08□□□□□ -0.16
VSX1-201ENST00000376707 Q5VSD8 79 aa14.08□□□□□ -0.16
VSX1-201ENST00000376707 UFSP1Q6NVU6 142 aa14.08□□□□□ -0.16
VSX1-201ENST00000376707 Q6ZSN1 163 aa14.08□□□□□ -0.16
VSX1-201ENST00000376707 GAGE12JA6NER3 117 aa14.07□□□□□ -0.16
VSX1-201ENST00000376707 INAFM2P0DMQ5 153 aa14.07□□□□□ -0.16
VSX1-201ENST00000376707 GAGE1Q13065 139 aa14.07□□□□□ -0.16
VSX1-201ENST00000376707 GAGE4Q13068 117 aa14.07□□□□□ -0.16
VSX1-201ENST00000376707 GAGE5Q13069 117 aa14.07□□□□□ -0.16
VSX1-201ENST00000376707 GAGE13Q4V321 117 aa14.07□□□□□ -0.16
VSX1-201ENST00000376707 SFT2D1Q8WV19 159 aa14.07□□□□□ -0.16
VSX1-201ENST00000376707 KANTRA0A1W2PQU2 76 aa14.06□□□□□ -0.16
VSX1-201ENST00000376707 H3BVH4 76 aa14.06□□□□□ -0.16
VSX1-201ENST00000376707 PAGE4O60829 102 aa14.06□□□□□ -0.16
VSX1-201ENST00000376707 LINC00694P0DN24 101 aa14.06□□□□□ -0.16
VSX1-201ENST00000376707 LAGE3Q14657 143 aa14.06□□□□□ -0.16
VSX1-201ENST00000376707 LINC01559Q495D7 138 aa14.06□□□□□ -0.16
VSX1-201ENST00000376707 Q8N814 137 aa14.06□□□□□ -0.16
VSX1-201ENST00000376707 FAM213BQ8TBF2 198 aa14.06□□□□□ -0.16
VSX1-201ENST00000376707 ZNF471Q9BX82 626 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 163.8 ms