RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 SPINK13Q1W4C9 94 aa15.55■□□□□ 0.08
HLA-C-201ENST00000376228 FAM104BQ5XKR9 115 aa15.55■□□□□ 0.08
HLA-C-201ENST00000376228 NAGKQ9UJ70 344 aa15.55■□□□□ 0.08
HLA-C-201ENST00000376228 TRAV12-3A0A0B4J271 114 aa15.54■□□□□ 0.08
HLA-C-201ENST00000376228 OR11H12B2RN74 326 aa15.54■□□□□ 0.08
HLA-C-201ENST00000376228 M0R2Z0 102 aa15.54■□□□□ 0.08
HLA-C-201ENST00000376228 INSL3P51460 131 aa15.54■□□□□ 0.08
HLA-C-201ENST00000376228 MUC21Q5SSG8 566 aa15.53■□□□□ 0.08
HLA-C-201ENST00000376228 C18orf32Q8TCD1 76 aa15.53■□□□□ 0.08
HLA-C-201ENST00000376228 RBMY1BA6NDE4 496 aaKnown RBP15.53■□□□□ 0.08
HLA-C-201ENST00000376228 RBMY1EA6NEQ0 496 aaKnown RBP15.53■□□□□ 0.08
HLA-C-201ENST00000376228 CRXO43186 299 aaPredicted RBP15.53■□□□□ 0.08
HLA-C-201ENST00000376228 RBMY1DP0C7P1 496 aaKnown RBP15.53■□□□□ 0.08
HLA-C-201ENST00000376228 S100A2P29034 98 aa15.53■□□□□ 0.08
HLA-C-201ENST00000376228 C20orf144Q9BQM9 153 aa15.53■□□□□ 0.08
HLA-C-201ENST00000376228 H3BVH4 76 aa15.52■□□□□ 0.07
HLA-C-201ENST00000376228 AMBPP02760 352 aa15.52■□□□□ 0.07
HLA-C-201ENST00000376228 RNASE3P12724 160 aaKnown RBP15.52■□□□□ 0.07
HLA-C-201ENST00000376228 S100A4P26447 101 aaKnown RBP15.52■□□□□ 0.07
HLA-C-201ENST00000376228 ZNF124Q15973 351 aa15.52■□□□□ 0.07
HLA-C-201ENST00000376228 BAGE3Q86Y29 109 aa15.52■□□□□ 0.07
HLA-C-201ENST00000376228 TMEM256Q8N2U0 113 aa15.52■□□□□ 0.07
HLA-C-201ENST00000376228 OR10AG1Q8NH19 301 aa15.52■□□□□ 0.07
HLA-C-201ENST00000376228 ZMAT5Q9UDW3 170 aaKnown RBP15.52■□□□□ 0.07
HLA-C-201ENST00000376228 U3KQK5 164 aa15.52■□□□□ 0.07
HLA-C-201ENST00000376228 TRAV12-2A0A075B6T6 113 aa15.51■□□□□ 0.07
HLA-C-201ENST00000376228 GNRH2O43555 120 aa15.51■□□□□ 0.07
HLA-C-201ENST00000376228 AKR1D1P51857 326 aa15.51■□□□□ 0.07
HLA-C-201ENST00000376228 LINC00310P59036 64 aa15.51■□□□□ 0.07
HLA-C-201ENST00000376228 MSRB1Q9NZV6 116 aa15.51■□□□□ 0.07
HLA-C-201ENST00000376228 IGHV1OR15-1A0A075B7D0 117 aa15.5■□□□□ 0.07
HLA-C-201ENST00000376228 MUC21A0A0G2JKD1 596 aa15.5■□□□□ 0.07
HLA-C-201ENST00000376228 MUC21A0A140T8X8 626 aa15.5■□□□□ 0.07
HLA-C-201ENST00000376228 PACRGQ96M98 296 aaPredicted RBP15.5■□□□□ 0.07
HLA-C-201ENST00000376228 HIST1H2BLQ99880 126 aa15.5■□□□□ 0.07
HLA-C-201ENST00000376228 SERF1AO75920 110 aa15.49■□□□□ 0.07
HLA-C-201ENST00000376228 NXPH4O95158 308 aa15.49■□□□□ 0.07
HLA-C-201ENST00000376228 SPANXN1Q5VSR9 72 aa15.49■□□□□ 0.07
HLA-C-201ENST00000376228 TRPT1Q86TN4 253 aaKnown RBP15.49■□□□□ 0.07
HLA-C-201ENST00000376228 LINC00467Q9BRT7 94 aa15.49■□□□□ 0.07
HLA-C-201ENST00000376228 C19orf73Q9NVV2 129 aa15.49■□□□□ 0.07
HLA-C-201ENST00000376228 STHQ8IWL8 128 aa15.48■□□□□ 0.07
HLA-C-201ENST00000376228 AMN1Q8IY45 258 aa15.48■□□□□ 0.07
HLA-C-201ENST00000376228 TMEM18Q96B42 140 aa15.48■□□□□ 0.07
HLA-C-201ENST00000376228 NUPR1O60356 82 aa15.48■□□□□ 0.07
HLA-C-201ENST00000376228 CD7P09564 240 aa15.48■□□□□ 0.07
HLA-C-201ENST00000376228 MRPL51Q4U2R6 128 aaKnown RBP15.48■□□□□ 0.07
HLA-C-201ENST00000376228 PDZD11Q5EBL8 140 aa15.48■□□□□ 0.07
HLA-C-201ENST00000376228 SMIM15Q7Z3B0 74 aa15.48■□□□□ 0.07
HLA-C-201ENST00000376228 RNF185Q96GF1 192 aa15.48■□□□□ 0.07
HLA-C-201ENST00000376228 PHLDA3Q9Y5J5 127 aa15.48■□□□□ 0.07
HLA-C-201ENST00000376228 MUC4Q99102 2169 aa15.47■□□□□ 0.07
HLA-C-201ENST00000376228 IGHV3-16A0A0C4DH30 117 aa15.47■□□□□ 0.07
HLA-C-201ENST00000376228 PPBPP02775 128 aa15.47■□□□□ 0.07
HLA-C-201ENST00000376228 RAB4AP20338 218 aa15.47■□□□□ 0.07
HLA-C-201ENST00000376228 C9orf85Q96MD7 179 aa15.47■□□□□ 0.07
HLA-C-201ENST00000376228 TRGV11A0A075B6L2 103 aa15.46■□□□□ 0.07
HLA-C-201ENST00000376228 FABP4P15090 132 aa15.46■□□□□ 0.07
HLA-C-201ENST00000376228 SSTP61278 116 aa15.46■□□□□ 0.07
HLA-C-201ENST00000376228 ORMDL3Q8N138 153 aa15.46■□□□□ 0.07
HLA-C-201ENST00000376228 RBMY1A1P0DJD3 496 aaKnown RBP15.45■□□□□ 0.06
HLA-C-201ENST00000376228 RBMY1CP0DJD4 496 aa15.45■□□□□ 0.06
HLA-C-201ENST00000376228 RBMY1FQ15415 496 aaKnown RBP15.45■□□□□ 0.06
HLA-C-201ENST00000376228 COL7A1Q02388 2944 aa15.45■□□□□ 0.06
HLA-C-201ENST00000376228 DNAH9Q9NYC9 4486 aa15.45■□□□□ 0.06
HLA-C-201ENST00000376228 FXYD7P58549 80 aa15.44■□□□□ 0.06
HLA-C-201ENST00000376228 NUTF2P61970 127 aaKnown RBP15.44■□□□□ 0.06
HLA-C-201ENST00000376228 IQCJQ1A5X6 159 aa15.44■□□□□ 0.06
HLA-C-201ENST00000376228 Q8N1Y9 231 aa15.44■□□□□ 0.06
HLA-C-201ENST00000376228 RCHY1Q96PM5 261 aa15.44■□□□□ 0.06
HLA-C-201ENST00000376228 LAMTOR2Q9Y2Q5 125 aa15.44■□□□□ 0.06
HLA-C-201ENST00000376228 INSP01308 110 aa15.43■□□□□ 0.06
HLA-C-201ENST00000376228 EVI2AP22794 236 aa15.43■□□□□ 0.06
HLA-C-201ENST00000376228 OR10D4PQ8NGN7 298 aa15.43■□□□□ 0.06
HLA-C-201ENST00000376228 D6R8Y8 96 aa15.43■□□□□ 0.06
HLA-C-201ENST00000376228 LINC00518Q8N0U6 118 aa15.43■□□□□ 0.06
HLA-C-201ENST00000376228 CHCHD1Q96BP2 118 aaKnown RBP15.43■□□□□ 0.06
HLA-C-201ENST00000376228 PRELID3AQ96N28 172 aa15.43■□□□□ 0.06
HLA-C-201ENST00000376228 SMIM6P0DI80 62 aa15.42■□□□□ 0.06
HLA-C-201ENST00000376228 M0R381 172 aa15.41■□□□□ 0.06
HLA-C-201ENST00000376228 CKS2P33552 79 aa15.41■□□□□ 0.06
HLA-C-201ENST00000376228 NIT1Q86X76 327 aa15.41■□□□□ 0.06
HLA-C-201ENST00000376228 TIMM8BQ9Y5J9 83 aaPredicted RBP15.41■□□□□ 0.06
HLA-C-201ENST00000376228 URB1-AS1Q96HZ7 61 aa15.4■□□□□ 0.06
HLA-C-201ENST00000376228 AP1S3Q96PC3 154 aa15.4■□□□□ 0.06
HLA-C-201ENST00000376228 B9D2Q9BPU9 175 aa15.4■□□□□ 0.06
HLA-C-201ENST00000376228 DPH3P1Q9H4G8 78 aa15.4■□□□□ 0.06
HLA-C-201ENST00000376228 MDFICQ9P1T7 246 aa15.4■□□□□ 0.06
HLA-C-201ENST00000376228 MORN3Q6PF18 240 aaPredicted RBP15.39■□□□□ 0.05
HLA-C-201ENST00000376228 POM121L12Q8N7R1 296 aa15.39■□□□□ 0.05
HLA-C-201ENST00000376228 PTH2Q96A98 100 aa15.39■□□□□ 0.05
HLA-C-201ENST00000376228 CBY3A6NI87 242 aa15.38■□□□□ 0.05
HLA-C-201ENST00000376228 LINC00614P0C842 121 aa15.38■□□□□ 0.05
HLA-C-201ENST00000376228 PIK3CD-AS1Q5SR53 167 aa15.38■□□□□ 0.05
HLA-C-201ENST00000376228 SYT8Q8NBV8 401 aa15.38■□□□□ 0.05
HLA-C-201ENST00000376228 MRAP2Q96G30 205 aa15.38■□□□□ 0.05
HLA-C-201ENST00000376228 DEFB125Q8N687 156 aa15.38■□□□□ 0.05
HLA-C-201ENST00000376228 GSN-AS1Q9NRJ2 163 aa15.38■□□□□ 0.05
HLA-C-201ENST00000376228 KIF25-AS1Q9Y6Z4 181 aa15.38■□□□□ 0.05
HLA-C-201ENST00000376228 PRSS47A8MTI9 375 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms