RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 SLC25A16P16260 332 aa10.98□□□□□ -0.65
MSH5-201ENST00000375703 RNASE3P12724 160 aaKnown RBP10.98□□□□□ -0.65
MSH5-201ENST00000375703 Q6ZS46 218 aa10.98□□□□□ -0.65
MSH5-201ENST00000375703 NEXN-AS1Q8NBZ9 246 aa10.98□□□□□ -0.65
MSH5-201ENST00000375703 SRD5A1P18405 259 aa10.97□□□□□ -0.65
MSH5-201ENST00000375703 TAL2Q16559 108 aa10.97□□□□□ -0.65
MSH5-201ENST00000375703 NEGR1Q7Z3B1 354 aa10.97□□□□□ -0.65
MSH5-201ENST00000375703 HIST1H4GQ99525 98 aa10.97□□□□□ -0.65
MSH5-201ENST00000375703 C2orf66Q6UXQ4 117 aa10.97□□□□□ -0.65
MSH5-201ENST00000375703 APRG1Q8IVJ8 170 aa10.97□□□□□ -0.65
MSH5-201ENST00000375703 G3V4G9 280 aa10.96□□□□□ -0.65
MSH5-201ENST00000375703 C10orf105Q8TEF2 133 aa10.96□□□□□ -0.65
MSH5-201ENST00000375703 TRBV7-9A0A0J9YWB2 115 aa10.96□□□□□ -0.66
MSH5-201ENST00000375703 OR11H12B2RN74 326 aa10.96□□□□□ -0.66
MSH5-201ENST00000375703 RNF223E7ERA6 249 aa10.96□□□□□ -0.66
MSH5-201ENST00000375703 PPP1R17O96001 155 aa10.96□□□□□ -0.66
MSH5-201ENST00000375703 OR11H1Q8NG94 326 aa10.96□□□□□ -0.66
MSH5-201ENST00000375703 OR11H2Q8NH07 326 aa10.96□□□□□ -0.66
MSH5-201ENST00000375703 DAZ1Q9NQZ3 744 aaKnown RBP10.96□□□□□ -0.66
MSH5-201ENST00000375703 CCL19Q99731 98 aa10.95□□□□□ -0.66
MSH5-201ENST00000375703 BAALCQ8WXS3 180 aa10.95□□□□□ -0.66
MSH5-201ENST00000375703 MYMXA0A1B0GTQ4 84 aa10.94□□□□□ -0.66
MSH5-201ENST00000375703 IGLV1-40P01703 118 aa10.94□□□□□ -0.66
MSH5-201ENST00000375703 C12orf74Q32Q52 190 aa10.94□□□□□ -0.66
MSH5-201ENST00000375703 PRSS29PA6NIE9 313 aa10.94□□□□□ -0.66
MSH5-201ENST00000375703 IGLL5B9A064 214 aa10.94□□□□□ -0.66
MSH5-201ENST00000375703 FAM159AQ6UWV7 190 aa10.93□□□□□ -0.66
MSH5-201ENST00000375703 PRORYQ9H606 182 aa10.93□□□□□ -0.66
MSH5-201ENST00000375703 E9PLD3 99 aa10.93□□□□□ -0.66
MSH5-201ENST00000375703 NDUFS8O00217 210 aa10.93□□□□□ -0.66
MSH5-201ENST00000375703 EDN2P20800 178 aa10.93□□□□□ -0.66
MSH5-201ENST00000375703 ID1P41134 155 aa10.93□□□□□ -0.66
MSH5-201ENST00000375703 POM121L12Q8N7R1 296 aa10.93□□□□□ -0.66
MSH5-201ENST00000375703 CELSR1Q9NYQ6 3014 aa10.92□□□□□ -0.66
MSH5-201ENST00000375703 IGHV4-30-2A0A087WSY4 118 aa10.92□□□□□ -0.66
MSH5-201ENST00000375703 KLLNB2CW77 178 aa10.92□□□□□ -0.66
MSH5-201ENST00000375703 ATP5J2P56134 94 aa10.92□□□□□ -0.66
MSH5-201ENST00000375703 KIF25-AS1Q9Y6Z4 181 aa10.92□□□□□ -0.66
MSH5-201ENST00000375703 ABCA2Q9BZC7 2435 aa10.92□□□□□ -0.66
MSH5-201ENST00000375703 TRBV7-3A0A075B6L6 115 aa10.92□□□□□ -0.66
MSH5-201ENST00000375703 K7EMT4 169 aa10.92□□□□□ -0.66
MSH5-201ENST00000375703 MSMBP08118 114 aa10.92□□□□□ -0.66
MSH5-201ENST00000375703 LINC00315P59091 139 aa10.92□□□□□ -0.66
MSH5-201ENST00000375703 FOXI2Q6ZQN5 318 aa10.92□□□□□ -0.66
MSH5-201ENST00000375703 ZNF479Q96JC4 524 aa10.92□□□□□ -0.66
MSH5-201ENST00000375703 NXPH4O95158 308 aa10.91□□□□□ -0.66
MSH5-201ENST00000375703 RPL24P83731 157 aaKnown RBP10.91□□□□□ -0.66
MSH5-201ENST00000375703 JPT2Q9H910 190 aa10.91□□□□□ -0.66
MSH5-201ENST00000375703 VPS13CQ709C8 3753 aa10.91□□□□□ -0.66
MSH5-201ENST00000375703 IGHV4OR15-8A0A075B7B6 117 aa10.91□□□□□ -0.66
MSH5-201ENST00000375703 A0A087WW49 117 aa10.91□□□□□ -0.66
MSH5-201ENST00000375703 CFAP161Q6P656 301 aa10.91□□□□□ -0.66
MSH5-201ENST00000375703 CYSLTR1Q9Y271 337 aa10.91□□□□□ -0.66
MSH5-201ENST00000375703 LINC01619G3V211 115 aa10.9□□□□□ -0.66
MSH5-201ENST00000375703 DUSP14O95147 198 aaKnown RBP10.9□□□□□ -0.66
MSH5-201ENST00000375703 SCGB2A2Q13296 93 aa10.9□□□□□ -0.66
MSH5-201ENST00000375703 DCANP1Q8TF63 244 aa10.9□□□□□ -0.66
MSH5-201ENST00000375703 PRADC1Q9BSG0 188 aa10.9□□□□□ -0.66
MSH5-201ENST00000375703 TRAV12-3A0A0B4J271 114 aa10.9□□□□□ -0.66
MSH5-201ENST00000375703 LGALS1P09382 135 aaKnown RBP10.9□□□□□ -0.66
MSH5-201ENST00000375703 CD7P09564 240 aa10.9□□□□□ -0.66
MSH5-201ENST00000375703 CFHR3Q02985 330 aa10.9□□□□□ -0.66
MSH5-201ENST00000375703 DEFB104AQ8WTQ1 72 aa10.9□□□□□ -0.66
MSH5-201ENST00000375703 F5H697 171 aa10.89□□□□□ -0.67
MSH5-201ENST00000375703 A0A087WWL8 130 aa10.89□□□□□ -0.67
MSH5-201ENST00000375703 AVPP01185 164 aa10.89□□□□□ -0.67
MSH5-201ENST00000375703 SPTAN1Q13813 2472 aaKnown RBP10.89□□□□□ -0.67
MSH5-201ENST00000375703 CRYGDP07320 174 aa10.88□□□□□ -0.67
MSH5-201ENST00000375703 POLR2KP53803 58 aaKnown RBP10.88□□□□□ -0.67
MSH5-201ENST00000375703 RPL32P62910 135 aaKnown RBP10.88□□□□□ -0.67
MSH5-201ENST00000375703 TMEM95Q3KNT9 176 aa10.88□□□□□ -0.67
MSH5-201ENST00000375703 SUMO4Q6EEV6 95 aa10.88□□□□□ -0.67
MSH5-201ENST00000375703 TP53TG1Q9Y2A0 90 aa10.88□□□□□ -0.67
MSH5-201ENST00000375703 ZNF815PA8K554 130 aa10.88□□□□□ -0.67
MSH5-201ENST00000375703 VCYO14598 125 aa10.88□□□□□ -0.67
MSH5-201ENST00000375703 SAMD13Q5VXD3 122 aa10.88□□□□□ -0.67
MSH5-201ENST00000375703 ZFP2Q6ZN57 461 aa10.88□□□□□ -0.67
MSH5-201ENST00000375703 HOXA3O43365 443 aaPredicted RBP10.87□□□□□ -0.67
MSH5-201ENST00000375703 AGRNO00468 2067 aa10.87□□□□□ -0.67
MSH5-201ENST00000375703 MUC4Q99102 2169 aa10.87□□□□□ -0.67
MSH5-201ENST00000375703 TEX48A0A1B0GUV7 120 aa10.87□□□□□ -0.67
MSH5-201ENST00000375703 F8W1H4 67 aa10.87□□□□□ -0.67
MSH5-201ENST00000375703 TSHBP01222 138 aa10.87□□□□□ -0.67
MSH5-201ENST00000375703 CD300EQ496F6 205 aaPredicted RBP10.87□□□□□ -0.67
MSH5-201ENST00000375703 KIR2DL4Q99706 377 aa10.87□□□□□ -0.67
MSH5-201ENST00000375703 A0A1B0GWB2 263 aa10.86□□□□□ -0.67
MSH5-201ENST00000375703 LINC01549A6NIU2 74 aa10.86□□□□□ -0.67
MSH5-201ENST00000375703 IGIPA6NJ69 53 aa10.86□□□□□ -0.67
MSH5-201ENST00000375703 H3BMG7 143 aa10.86□□□□□ -0.67
MSH5-201ENST00000375703 RRN3P1Q2M238 152 aa10.86□□□□□ -0.67
MSH5-201ENST00000375703 SCGB1D4Q6XE38 83 aa10.86□□□□□ -0.67
MSH5-201ENST00000375703 B4DSR2 109 aa10.86□□□□□ -0.67
MSH5-201ENST00000375703 ZNF688P0C7X2 276 aa10.86□□□□□ -0.67
MSH5-201ENST00000375703 WFDC2Q14508 124 aa10.86□□□□□ -0.67
MSH5-201ENST00000375703 KLHL30-AS1Q8NEE0 82 aa10.86□□□□□ -0.67
MSH5-201ENST00000375703 SPTBN4Q9H254 2564 aa10.86□□□□□ -0.67
MSH5-201ENST00000375703 IGKV3-20P01619 116 aa10.86□□□□□ -0.67
MSH5-201ENST00000375703 PSMB8P28062 276 aa10.86□□□□□ -0.67
MSH5-201ENST00000375703 RPL39P62891 51 aaKnown RBP10.86□□□□□ -0.67
MSH5-201ENST00000375703 PMVKQ15126 192 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms