RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 TMEM178BH3BS89 294 aa15.71■□□□□ 0.11
TMEFF1-201ENST00000374879 RPL39LQ96EH5 51 aaKnown RBP15.71■□□□□ 0.11
TMEFF1-201ENST00000374879 CHCHD5Q9BSY4 110 aa15.7■□□□□ 0.1
TMEFF1-201ENST00000374879 IGHV3-33P01772 117 aa15.7■□□□□ 0.1
TMEFF1-201ENST00000374879 MFAP4P55083 255 aa15.7■□□□□ 0.1
TMEFF1-201ENST00000374879 TIMD4Q96H15 378 aa15.7■□□□□ 0.1
TMEFF1-201ENST00000374879 SPANXA1Q9NS26 97 aa15.7■□□□□ 0.1
TMEFF1-201ENST00000374879 PKDREJQ9NTG1 2253 aa15.7■□□□□ 0.1
TMEFF1-201ENST00000374879 PCNX1Q96RV3 2341 aa15.69■□□□□ 0.1
TMEFF1-201ENST00000374879 IGLV4-69A0A075B6H9 119 aa15.69■□□□□ 0.1
TMEFF1-201ENST00000374879 A4D1N5 150 aa15.69■□□□□ 0.1
TMEFF1-201ENST00000374879 SPRY2O43597 315 aa15.69■□□□□ 0.1
TMEFF1-201ENST00000374879 TRAV2A0A0B4J234 112 aa15.68■□□□□ 0.1
TMEFF1-201ENST00000374879 IGLV1-47P01700 117 aa15.68■□□□□ 0.1
TMEFF1-201ENST00000374879 SLC50A1Q9BRV3 221 aa15.68■□□□□ 0.1
TMEFF1-201ENST00000374879 BUB1B-PAK6H3BSN5 160 aa15.68■□□□□ 0.1
TMEFF1-201ENST00000374879 IGHV4-39P01824 125 aa15.68■□□□□ 0.1
TMEFF1-201ENST00000374879 LINC01620Q4KN68 170 aa15.68■□□□□ 0.1
TMEFF1-201ENST00000374879 FANCD2OSQ96PS1 177 aa15.67■□□□□ 0.1
TMEFF1-201ENST00000374879 AGPAT4-IT1Q9H0P7 198 aa15.67■□□□□ 0.1
TMEFF1-201ENST00000374879 IGHV4-4A0A075B6R2 117 aa15.67■□□□□ 0.1
TMEFF1-201ENST00000374879 IGHV3-35A0A0C4DH35 117 aa15.67■□□□□ 0.1
TMEFF1-201ENST00000374879 DUSP14O95147 198 aaKnown RBP15.67■□□□□ 0.1
TMEFF1-201ENST00000374879 HERVK_113P61574 105 aa15.67■□□□□ 0.1
TMEFF1-201ENST00000374879 FOXC1Q12948 553 aa15.67■□□□□ 0.1
TMEFF1-201ENST00000374879 RPL13AP40429 203 aaKnown RBP15.66■□□□□ 0.1
TMEFF1-201ENST00000374879 TCF15Q12870 199 aa15.66■□□□□ 0.1
TMEFF1-201ENST00000374879 C14orf178Q8N769 122 aaPredicted RBP15.66■□□□□ 0.1
TMEFF1-201ENST00000374879 TMEM263Q8WUH6 116 aaKnown RBP15.66■□□□□ 0.1
TMEFF1-201ENST00000374879 TIMM23O14925 209 aa15.66■□□□□ 0.1
TMEFF1-201ENST00000374879 LINC01587Q99440 93 aa15.66■□□□□ 0.1
TMEFF1-201ENST00000374879 MSRB2Q9Y3D2 182 aa15.66■□□□□ 0.1
TMEFF1-201ENST00000374879 RNF223E7ERA6 249 aa15.65■□□□□ 0.1
TMEFF1-201ENST00000374879 LGALS9O00182 355 aa15.65■□□□□ 0.1
TMEFF1-201ENST00000374879 TSHBP01222 138 aa15.65■□□□□ 0.1
TMEFF1-201ENST00000374879 P0DMU3 169 aa15.65■□□□□ 0.1
TMEFF1-201ENST00000374879 FAM231AP0DMU4 169 aa15.65■□□□□ 0.1
TMEFF1-201ENST00000374879 FAM231CP0DMU5 169 aa15.65■□□□□ 0.1
TMEFF1-201ENST00000374879 ATXN8Q156A1 80 aa15.65■□□□□ 0.1
TMEFF1-201ENST00000374879 C21orf62Q9NYP8 219 aa15.65■□□□□ 0.1
TMEFF1-201ENST00000374879 COX7A1P24310 79 aa15.64■□□□□ 0.1
TMEFF1-201ENST00000374879 DEFB104AQ8WTQ1 72 aa15.64■□□□□ 0.1
TMEFF1-201ENST00000374879 TMEM126AQ9H061 195 aa15.64■□□□□ 0.1
TMEFF1-201ENST00000374879 ZNF292O60281 2723 aa15.64■□□□□ 0.09
TMEFF1-201ENST00000374879 IGFBPL1Q8WX77 278 aa15.64■□□□□ 0.09
TMEFF1-201ENST00000374879 AMELXQ99217 191 aa15.64■□□□□ 0.09
TMEFF1-201ENST00000374879 TACC2O95359 2948 aa15.64■□□□□ 0.09
TMEFF1-201ENST00000374879 IGLV11-55A0A075B6I3 123 aa15.64■□□□□ 0.09
TMEFF1-201ENST00000374879 H3BMM0 161 aa15.64■□□□□ 0.09
TMEFF1-201ENST00000374879 RNASE6Q93091 150 aaKnown RBP15.64■□□□□ 0.09
TMEFF1-201ENST00000374879 UBE2WQ96B02 151 aa15.64■□□□□ 0.09
TMEFF1-201ENST00000374879 BEX4Q9NWD9 120 aaPredicted RBP15.64■□□□□ 0.09
TMEFF1-201ENST00000374879 ACACAQ13085 2346 aa15.63■□□□□ 0.09
TMEFF1-201ENST00000374879 ANKRD11Q6UB99 2663 aaPredicted RBP15.63■□□□□ 0.09
TMEFF1-201ENST00000374879 TMEM170BQ5T4T1 132 aa15.63■□□□□ 0.09
TMEFF1-201ENST00000374879 ASCL5Q7RTU5 278 aa15.63■□□□□ 0.09
TMEFF1-201ENST00000374879 DYNLRB1Q9NP97 96 aa15.63■□□□□ 0.09
TMEFF1-201ENST00000374879 TRBV10-2A0A0K0K1G8 114 aa15.62■□□□□ 0.09
TMEFF1-201ENST00000374879 RBAKDNA6NC62 111 aa15.62■□□□□ 0.09
TMEFF1-201ENST00000374879 M0R381 172 aa15.62■□□□□ 0.09
TMEFF1-201ENST00000374879 ZNF56Q15929 161 aa15.62■□□□□ 0.09
TMEFF1-201ENST00000374879 Q1RN00 199 aa15.62■□□□□ 0.09
TMEFF1-201ENST00000374879 SVEP1Q4LDE5 3571 aa15.62■□□□□ 0.09
TMEFF1-201ENST00000374879 CTSGP08311 255 aa15.61■□□□□ 0.09
TMEFF1-201ENST00000374879 IGHV3-66A0A0C4DH42 116 aa15.6■□□□□ 0.09
TMEFF1-201ENST00000374879 LINC01600Q96MT4 127 aa15.6■□□□□ 0.09
TMEFF1-201ENST00000374879 J3QQQ9 107 aa15.6■□□□□ 0.09
TMEFF1-201ENST00000374879 PAPPA-AS1Q5QFB9 102 aa15.6■□□□□ 0.09
TMEFF1-201ENST00000374879 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.6■□□□□ 0.09
TMEFF1-201ENST00000374879 MUSTN1Q8IVN3 82 aa15.6■□□□□ 0.09
TMEFF1-201ENST00000374879 PTPRZ1P23471 2315 aaPredicted RBP15.6■□□□□ 0.09
TMEFF1-201ENST00000374879 ZNRF2Q8NHG8 242 aa15.59■□□□□ 0.09
TMEFF1-201ENST00000374879 KAAG1Q9UBP8 84 aa15.59■□□□□ 0.09
TMEFF1-201ENST00000374879 A0A0B4J2C4 111 aa15.59■□□□□ 0.09
TMEFF1-201ENST00000374879 MGPP08493 103 aa15.59■□□□□ 0.09
TMEFF1-201ENST00000374879 RNF5Q99942 180 aa15.59■□□□□ 0.09
TMEFF1-201ENST00000374879 E7EQL1 145 aa15.58■□□□□ 0.08
TMEFF1-201ENST00000374879 ATP5J2P56134 94 aa15.58■□□□□ 0.08
TMEFF1-201ENST00000374879 TP53TG1Q9Y2A0 90 aa15.58■□□□□ 0.08
TMEFF1-201ENST00000374879 NBR2O15453 112 aa15.58■□□□□ 0.08
TMEFF1-201ENST00000374879 LINC00694P0DN24 101 aa15.58■□□□□ 0.08
TMEFF1-201ENST00000374879 PMVKQ15126 192 aa15.58■□□□□ 0.08
TMEFF1-201ENST00000374879 C2orf82Q6UX34 121 aa15.58■□□□□ 0.08
TMEFF1-201ENST00000374879 Q8NA96 180 aa15.58■□□□□ 0.08
TMEFF1-201ENST00000374879 DUX3Q96PT4 197 aa15.58■□□□□ 0.08
TMEFF1-201ENST00000374879 LGALS3P17931 250 aaKnown RBP15.57■□□□□ 0.08
TMEFF1-201ENST00000374879 IGIPA6NJ69 53 aa15.57■□□□□ 0.08
TMEFF1-201ENST00000374879 MRPL23Q16540 153 aaKnown RBP15.57■□□□□ 0.08
TMEFF1-201ENST00000374879 NRGNQ92686 78 aa15.57■□□□□ 0.08
TMEFF1-201ENST00000374879 DPH3P1Q9H4G8 78 aa15.57■□□□□ 0.08
TMEFF1-201ENST00000374879 IGHV3OR16-13A0A075B7E8 117 aa15.56■□□□□ 0.08
TMEFF1-201ENST00000374879 IGHV3-74A0A0B4J1X5 117 aa15.56■□□□□ 0.08
TMEFF1-201ENST00000374879 TRIAP1O43715 76 aa15.56■□□□□ 0.08
TMEFF1-201ENST00000374879 PRR9Q5T870 116 aa15.56■□□□□ 0.08
TMEFF1-201ENST00000374879 J3KRW8 73 aa15.56■□□□□ 0.08
TMEFF1-201ENST00000374879 RPL39P62891 51 aaKnown RBP15.56■□□□□ 0.08
TMEFF1-201ENST00000374879 CSDC2Q9Y534 153 aaKnown RBP15.56■□□□□ 0.08
TMEFF1-201ENST00000374879 WNK2Q9Y3S1 2297 aa15.55■□□□□ 0.08
TMEFF1-201ENST00000374879 H7C423 109 aa15.55■□□□□ 0.08
TMEFF1-201ENST00000374879 APC2O95996 2303 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms