RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 KLK5Q9Y337 293 aaPredicted RBP10.61□□□□□ -0.71
HSPG2-201ENST00000374673 TMEM241Q24JQ0 296 aa10.6□□□□□ -0.71
HSPG2-201ENST00000374673 UQCC3Q6UW78 93 aa10.6□□□□□ -0.71
HSPG2-201ENST00000374673 OR2D3Q8NGH3 330 aa10.6□□□□□ -0.71
HSPG2-201ENST00000374673 RNASE7Q9H1E1 156 aaKnown RBP10.6□□□□□ -0.71
HSPG2-201ENST00000374673 STARD9Q9P2P6 4700 aa10.59□□□□□ -0.71
HSPG2-201ENST00000374673 LINC00862A6NCI5 91 aa10.59□□□□□ -0.71
HSPG2-201ENST00000374673 SNAI2O43623 268 aa10.59□□□□□ -0.71
HSPG2-201ENST00000374673 SFTA3P0C7M3 94 aa10.59□□□□□ -0.71
HSPG2-201ENST00000374673 HTN3P15516 51 aa10.59□□□□□ -0.71
HSPG2-201ENST00000374673 RPL23P62829 140 aaKnown RBP10.59□□□□□ -0.71
HSPG2-201ENST00000374673 ZNF876PQ49A33 203 aa10.59□□□□□ -0.71
HSPG2-201ENST00000374673 PIK3CD-AS1Q5SR53 167 aa10.59□□□□□ -0.71
HSPG2-201ENST00000374673 RPP21Q9H633 154 aaKnown RBP10.59□□□□□ -0.71
HSPG2-201ENST00000374673 XKRY2A2RUG3 117 aa10.58□□□□□ -0.72
HSPG2-201ENST00000374673 FAM210BQ96KR6 192 aa10.58□□□□□ -0.72
HSPG2-201ENST00000374673 SSBP4Q9BWG4 385 aaPredicted RBP10.58□□□□□ -0.72
HSPG2-201ENST00000374673 CSMD3Q7Z407 3707 aa10.58□□□□□ -0.72
HSPG2-201ENST00000374673 NACAE9PAV3 2078 aa10.57□□□□□ -0.72
HSPG2-201ENST00000374673 TRAV4A0A0B4J268 109 aa10.57□□□□□ -0.72
HSPG2-201ENST00000374673 F5H768 121 aa10.57□□□□□ -0.72
HSPG2-201ENST00000374673 OR5AL1P0C617 328 aa10.57□□□□□ -0.72
HSPG2-201ENST00000374673 IGLC6P0CF74 106 aa10.57□□□□□ -0.72
HSPG2-201ENST00000374673 TCTAP57738 103 aa10.57□□□□□ -0.72
HSPG2-201ENST00000374673 ERVFC1-1P60608 527 aa10.57□□□□□ -0.72
HSPG2-201ENST00000374673 COMMD7Q86VX2 200 aa10.57□□□□□ -0.72
HSPG2-201ENST00000374673 POM121L12Q8N7R1 296 aa10.57□□□□□ -0.72
HSPG2-201ENST00000374673 ISOC2Q96AB3 205 aa10.57□□□□□ -0.72
HSPG2-201ENST00000374673 OSTCQ9NRP0 149 aa10.57□□□□□ -0.72
HSPG2-201ENST00000374673 PHLDA3Q9Y5J5 127 aa10.57□□□□□ -0.72
HSPG2-201ENST00000374673 IGHV4-4A0A075B6R2 117 aa10.56□□□□□ -0.72
HSPG2-201ENST00000374673 IGLL5B9A064 214 aa10.56□□□□□ -0.72
HSPG2-201ENST00000374673 RS1O15537 224 aa10.56□□□□□ -0.72
HSPG2-201ENST00000374673 GATCO43716 136 aaKnown RBP10.56□□□□□ -0.72
HSPG2-201ENST00000374673 GZMBP10144 247 aa10.56□□□□□ -0.72
HSPG2-201ENST00000374673 HOXA5P20719 270 aa10.56□□□□□ -0.72
HSPG2-201ENST00000374673 ADIRFQ15847 76 aa10.56□□□□□ -0.72
HSPG2-201ENST00000374673 CT83Q5H943 113 aa10.56□□□□□ -0.72
HSPG2-201ENST00000374673 ZFP82Q8N141 532 aa10.56□□□□□ -0.72
HSPG2-201ENST00000374673 SYT8Q8NBV8 401 aa10.56□□□□□ -0.72
HSPG2-201ENST00000374673 CIDEAO60543 219 aa10.55□□□□□ -0.72
HSPG2-201ENST00000374673 NXPH4O95158 308 aa10.55□□□□□ -0.72
HSPG2-201ENST00000374673 IGHV3-53P01767 116 aa10.55□□□□□ -0.72
HSPG2-201ENST00000374673 DMRTA1Q5VZB9 504 aa10.55□□□□□ -0.72
HSPG2-201ENST00000374673 FER1L6-AS1Q8NA97 138 aa10.55□□□□□ -0.72
HSPG2-201ENST00000374673 OR4C5Q8NGB2 326 aa10.55□□□□□ -0.72
HSPG2-201ENST00000374673 ZNF479Q96JC4 524 aa10.55□□□□□ -0.72
HSPG2-201ENST00000374673 A0A1W2PPQ1 181 aa10.54□□□□□ -0.72
HSPG2-201ENST00000374673 A8MWV9 139 aa10.54□□□□□ -0.72
HSPG2-201ENST00000374673 FHL2Q14192 279 aa10.54□□□□□ -0.72
HSPG2-201ENST00000374673 CFAP126Q5VTH2 177 aa10.54□□□□□ -0.72
HSPG2-201ENST00000374673 TMEM88Q6PEY1 159 aa10.54□□□□□ -0.72
HSPG2-201ENST00000374673 C15orf54Q8N8G6 183 aa10.54□□□□□ -0.72
HSPG2-201ENST00000374673 OR10AG1Q8NH19 301 aa10.54□□□□□ -0.72
HSPG2-201ENST00000374673 SFRP2Q96HF1 295 aa10.54□□□□□ -0.72
HSPG2-201ENST00000374673 APLNQ9ULZ1 77 aa10.54□□□□□ -0.72
HSPG2-201ENST00000374673 DYNC2H1Q8NCM8 4307 aaKnown RBP10.53□□□□□ -0.72
HSPG2-201ENST00000374673 TMEM218A2RU14 115 aa10.53□□□□□ -0.72
HSPG2-201ENST00000374673 A8MWL6 223 aa10.53□□□□□ -0.72
HSPG2-201ENST00000374673 F2Z2F3 143 aa10.53□□□□□ -0.72
HSPG2-201ENST00000374673 M0R381 172 aa10.53□□□□□ -0.72
HSPG2-201ENST00000374673 PNRC1Q12796 327 aaPredicted RBP10.53□□□□□ -0.72
HSPG2-201ENST00000374673 SLAQ13239 276 aa10.53□□□□□ -0.72
HSPG2-201ENST00000374673 TRGV4A0A0C4DH28 118 aa10.52□□□□□ -0.73
HSPG2-201ENST00000374673 H3BNG1 76 aa10.52□□□□□ -0.73
HSPG2-201ENST00000374673 CTRLP40313 264 aa10.52□□□□□ -0.73
HSPG2-201ENST00000374673 SPANXN1Q5VSR9 72 aa10.52□□□□□ -0.73
HSPG2-201ENST00000374673 C15orf53Q8NAA6 179 aa10.52□□□□□ -0.73
HSPG2-201ENST00000374673 OR10G8Q8NGN5 311 aa10.52□□□□□ -0.73
HSPG2-201ENST00000374673 PRO0255Q9UI72 69 aa10.52□□□□□ -0.73
HSPG2-201ENST00000374673 V9GYV3 84 aa10.52□□□□□ -0.73
HSPG2-201ENST00000374673 TRAV26-1A0A087WT03 109 aa10.51□□□□□ -0.73
HSPG2-201ENST00000374673 ADCYAP1P18509 176 aa10.51□□□□□ -0.73
HSPG2-201ENST00000374673 CACNG7P62955 275 aa10.51□□□□□ -0.73
HSPG2-201ENST00000374673 LYZL1Q6UWQ5 148 aa10.51□□□□□ -0.73
HSPG2-201ENST00000374673 ZFP2Q6ZN57 461 aa10.51□□□□□ -0.73
HSPG2-201ENST00000374673 TSKUQ8WUA8 353 aa10.51□□□□□ -0.73
HSPG2-201ENST00000374673 GTSF1Q8WW33 167 aa10.51□□□□□ -0.73
HSPG2-201ENST00000374673 TPPP3Q9BW30 176 aa10.51□□□□□ -0.73
HSPG2-201ENST00000374673 CNFNQ9BYD5 112 aa10.51□□□□□ -0.73
HSPG2-201ENST00000374673 GFRA4Q9GZZ7 299 aa10.51□□□□□ -0.73
HSPG2-201ENST00000374673 JPT2Q9H910 190 aa10.51□□□□□ -0.73
HSPG2-201ENST00000374673 MUC21A0A0G2JKD1 596 aa10.5□□□□□ -0.73
HSPG2-201ENST00000374673 MUC21A0A140T8X8 626 aa10.5□□□□□ -0.73
HSPG2-201ENST00000374673 FAM231BA6NCW3 169 aa10.5□□□□□ -0.73
HSPG2-201ENST00000374673 RHODO00212 210 aa10.5□□□□□ -0.73
HSPG2-201ENST00000374673 CRYBA4P53673 196 aa10.5□□□□□ -0.73
HSPG2-201ENST00000374673 FOXA3P55318 350 aaPredicted RBP10.5□□□□□ -0.73
HSPG2-201ENST00000374673 UFSP1Q6NVU6 142 aa10.5□□□□□ -0.73
HSPG2-201ENST00000374673 WDR73Q6P4I2 378 aa10.5□□□□□ -0.73
HSPG2-201ENST00000374673 VSIG2Q96IQ7 327 aa10.5□□□□□ -0.73
HSPG2-201ENST00000374673 SEC11CQ9BY50 192 aa10.5□□□□□ -0.73
HSPG2-201ENST00000374673 HHLA3Q9XRX5 114 aa10.5□□□□□ -0.73
HSPG2-201ENST00000374673 A0A0J9YY99 117 aa10.49□□□□□ -0.73
HSPG2-201ENST00000374673 F8W036 122 aa10.49□□□□□ -0.73
HSPG2-201ENST00000374673 CRYGDP07320 174 aa10.49□□□□□ -0.73
HSPG2-201ENST00000374673 GATA1P15976 413 aaPredicted RBP10.49□□□□□ -0.73
HSPG2-201ENST00000374673 SAMD10Q9BYL1 202 aa10.49□□□□□ -0.73
HSPG2-201ENST00000374673 IGHV3-73A0A0B4J1V6 119 aa10.48□□□□□ -0.73
HSPG2-201ENST00000374673 PAX4O43316 350 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms