RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 FAM231CP0DMU5 169 aa7.34□□□□□ -1.23
SF3A3-201ENST00000373019 SLC25A29Q8N8R3 303 aa7.34□□□□□ -1.23
SF3A3-201ENST00000373019 TMEM190Q8WZ59 177 aa7.34□□□□□ -1.23
SF3A3-201ENST00000373019 KLK15Q9H2R5 256 aa7.34□□□□□ -1.23
SF3A3-201ENST00000373019 FAM236AA0A1B0GUQ0 79 aa7.33□□□□□ -1.24
SF3A3-201ENST00000373019 FAM236BA0A1B0GV22 79 aa7.33□□□□□ -1.24
SF3A3-201ENST00000373019 RBAKDNA6NC62 111 aa7.33□□□□□ -1.24
SF3A3-201ENST00000373019 C9orf153Q5TBE3 101 aa7.33□□□□□ -1.24
SF3A3-201ENST00000373019 IL17RELQ6ZVW7 336 aa7.33□□□□□ -1.24
SF3A3-201ENST00000373019 TMEM263Q8WUH6 116 aaKnown RBP7.33□□□□□ -1.24
SF3A3-201ENST00000373019 TOMM6Q96B49 74 aa7.33□□□□□ -1.24
SF3A3-201ENST00000373019 H3BMM0 161 aa7.33□□□□□ -1.24
SF3A3-201ENST00000373019 TSPEAR-AS2P59090 65 aa7.33□□□□□ -1.24
SF3A3-201ENST00000373019 MSMPQ1L6U9 139 aa7.33□□□□□ -1.24
SF3A3-201ENST00000373019 UBE2WQ96B02 151 aa7.33□□□□□ -1.24
SF3A3-201ENST00000373019 UBTD1Q9HAC8 227 aa7.33□□□□□ -1.24
SF3A3-201ENST00000373019 POLQO75417 2590 aa7.33□□□□□ -1.24
SF3A3-201ENST00000373019 TRAV17A0A0B4J275 112 aa7.32□□□□□ -1.24
SF3A3-201ENST00000373019 TRBV10-2A0A0K0K1G8 114 aa7.32□□□□□ -1.24
SF3A3-201ENST00000373019 IGKV3-15P01624 115 aa7.32□□□□□ -1.24
SF3A3-201ENST00000373019 ORM1P02763 201 aa7.32□□□□□ -1.24
SF3A3-201ENST00000373019 TEX36Q5VZQ5 186 aa7.32□□□□□ -1.24
SF3A3-201ENST00000373019 FDCSPQ8NFU4 85 aa7.32□□□□□ -1.24
SF3A3-201ENST00000373019 SCGB3A1Q96QR1 104 aa7.32□□□□□ -1.24
SF3A3-201ENST00000373019 AMELXQ99217 191 aa7.32□□□□□ -1.24
SF3A3-201ENST00000373019 EDA2RQ9HAV5 297 aa7.32□□□□□ -1.24
SF3A3-201ENST00000373019 CRYGDP07320 174 aa7.32□□□□□ -1.24
SF3A3-201ENST00000373019 ZNF22P17026 224 aaPredicted RBP7.32□□□□□ -1.24
SF3A3-201ENST00000373019 SRSF2Q01130 221 aaKnown RBP7.32□□□□□ -1.24
SF3A3-201ENST00000373019 C14orf178Q8N769 122 aaPredicted RBP7.32□□□□□ -1.24
SF3A3-201ENST00000373019 PIMREGQ9BSJ6 248 aa7.32□□□□□ -1.24
SF3A3-201ENST00000373019 ERCC8Q13216 396 aa7.32□□□□□ -1.24
SF3A3-201ENST00000373019 HES1Q14469 280 aa7.32□□□□□ -1.24
SF3A3-201ENST00000373019 LINC00526Q96FQ7 95 aa7.32□□□□□ -1.24
SF3A3-201ENST00000373019 DUX3Q96PT4 197 aa7.32□□□□□ -1.24
SF3A3-201ENST00000373019 ABCA12Q86UK0 2595 aa7.31□□□□□ -1.24
SF3A3-201ENST00000373019 FAM240AA0A1B0GVK7 77 aa7.31□□□□□ -1.24
SF3A3-201ENST00000373019 CD3EP07766 207 aa7.31□□□□□ -1.24
SF3A3-201ENST00000373019 ZNF491Q8N8L2 437 aa7.31□□□□□ -1.24
SF3A3-201ENST00000373019 TTTY12Q9BZ98 90 aa7.31□□□□□ -1.24
SF3A3-201ENST00000373019 I3L2K1 104 aa7.31□□□□□ -1.24
SF3A3-201ENST00000373019 IGHV4-39P01824 125 aa7.31□□□□□ -1.24
SF3A3-201ENST00000373019 ATXN8Q156A1 80 aa7.31□□□□□ -1.24
SF3A3-201ENST00000373019 UQCRQO14949 82 aa7.31□□□□□ -1.24
SF3A3-201ENST00000373019 RPS28P62857 69 aaKnown RBP7.31□□□□□ -1.24
SF3A3-201ENST00000373019 IGLV4-69A0A075B6H9 119 aa7.3□□□□□ -1.24
SF3A3-201ENST00000373019 H7C2G1 150 aa7.3□□□□□ -1.24
SF3A3-201ENST00000373019 H7C423 109 aa7.3□□□□□ -1.24
SF3A3-201ENST00000373019 KLRB1Q12918 225 aa7.3□□□□□ -1.24
SF3A3-201ENST00000373019 PLGLAQ15195 96 aa7.3□□□□□ -1.24
SF3A3-201ENST00000373019 DEFB121Q5J5C9 76 aa7.3□□□□□ -1.24
SF3A3-201ENST00000373019 GAFA1Q96PS6 74 aa7.3□□□□□ -1.24
SF3A3-201ENST00000373019 EMP1P54849 157 aa7.3□□□□□ -1.24
SF3A3-201ENST00000373019 PDE6HQ13956 83 aa7.3□□□□□ -1.24
SF3A3-201ENST00000373019 FAM216BQ8N7L0 139 aa7.3□□□□□ -1.24
SF3A3-201ENST00000373019 PRORYQ9H606 182 aa7.3□□□□□ -1.24
SF3A3-201ENST00000373019 C11orf86A6NJI1 115 aa7.3□□□□□ -1.24
SF3A3-201ENST00000373019 PMVKQ15126 192 aa7.3□□□□□ -1.24
SF3A3-201ENST00000373019 SMIM2Q9BVW6 85 aa7.3□□□□□ -1.24
SF3A3-201ENST00000373019 IGKV3D-20A0A0C4DH25 116 aa7.29□□□□□ -1.24
SF3A3-201ENST00000373019 C11orf21Q9P2W6 132 aa7.29□□□□□ -1.24
SF3A3-201ENST00000373019 MAP1AP78559 2803 aaPredicted RBP7.29□□□□□ -1.24
SF3A3-201ENST00000373019 BAHCC1Q9P281 2608 aa7.29□□□□□ -1.24
SF3A3-201ENST00000373019 TEX22C9J3V5 150 aa7.29□□□□□ -1.24
SF3A3-201ENST00000373019 IGFL4Q6B9Z1 124 aa7.29□□□□□ -1.24
SF3A3-201ENST00000373019 CFHR4Q92496 578 aa7.29□□□□□ -1.24
SF3A3-201ENST00000373019 CCL13Q99616 98 aa7.29□□□□□ -1.24
SF3A3-201ENST00000373019 CYSTM1Q9H1C7 97 aa7.29□□□□□ -1.24
SF3A3-201ENST00000373019 CNTFRP26992 372 aa7.29□□□□□ -1.24
SF3A3-201ENST00000373019 TMEM219Q86XT9 240 aa7.29□□□□□ -1.24
SF3A3-201ENST00000373019 CFAP46Q8IYW2 2715 aa7.29□□□□□ -1.24
SF3A3-201ENST00000373019 HIVEP3Q5T1R4 2406 aa7.28□□□□□ -1.24
SF3A3-201ENST00000373019 MED13LQ71F56 2210 aa7.28□□□□□ -1.24
SF3A3-201ENST00000373019 A0A0B4J2C4 111 aa7.28□□□□□ -1.24
SF3A3-201ENST00000373019 TNFAIP6P98066 277 aaPredicted RBP7.28□□□□□ -1.24
SF3A3-201ENST00000373019 C2orf82Q6UX34 121 aa7.28□□□□□ -1.24
SF3A3-201ENST00000373019 RNF125Q96EQ8 232 aa7.28□□□□□ -1.24
SF3A3-201ENST00000373019 IMUPQ9GZP8 106 aa7.28□□□□□ -1.24
SF3A3-201ENST00000373019 IGHV7-4-1A0A0J9YVY3 117 aa7.28□□□□□ -1.24
SF3A3-201ENST00000373019 TRIAP1O43715 76 aa7.28□□□□□ -1.24
SF3A3-201ENST00000373019 TSHBP01222 138 aa7.28□□□□□ -1.24
SF3A3-201ENST00000373019 RPL27AP46776 148 aaKnown RBP7.28□□□□□ -1.24
SF3A3-201ENST00000373019 DEFB108BQ8NET1 73 aa7.28□□□□□ -1.24
SF3A3-201ENST00000373019 C2orf48Q96LS8 159 aa7.28□□□□□ -1.24
SF3A3-201ENST00000373019 LINC00527Q9UJ94 153 aa7.28□□□□□ -1.24
SF3A3-201ENST00000373019 TACC2O95359 2948 aa7.28□□□□□ -1.24
SF3A3-201ENST00000373019 CADP27708 2225 aa7.28□□□□□ -1.24
SF3A3-201ENST00000373019 RNF223E7ERA6 249 aa7.28□□□□□ -1.24
SF3A3-201ENST00000373019 VMA21Q3ZAQ7 101 aa7.28□□□□□ -1.24
SF3A3-201ENST00000373019 ORMDL2Q53FV1 153 aa7.28□□□□□ -1.24
SF3A3-201ENST00000373019 C2orf66Q6UXQ4 117 aa7.28□□□□□ -1.24
SF3A3-201ENST00000373019 SMCR5Q8TEV8 140 aa7.28□□□□□ -1.24
SF3A3-201ENST00000373019 IGFBPL1Q8WX77 278 aa7.28□□□□□ -1.24
SF3A3-201ENST00000373019 CCL3L1P16619 93 aa7.27□□□□□ -1.25
SF3A3-201ENST00000373019 BBC3Q96PG8 261 aaPredicted RBP7.27□□□□□ -1.25
SF3A3-201ENST00000373019 TRBV30A0A0K0K1B3 111 aa7.27□□□□□ -1.25
SF3A3-201ENST00000373019 C17orf100A8MU93 164 aa7.27□□□□□ -1.25
SF3A3-201ENST00000373019 OXTP01178 125 aa7.27□□□□□ -1.25
SF3A3-201ENST00000373019 CRYGBP07316 175 aa7.27□□□□□ -1.25
SF3A3-201ENST00000373019 MZT1Q08AG7 82 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms