RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 CLEC2AQ6UVW9 174 aa12.62□□□□□ -0.39
PCIF1-201ENST00000372409 C10orf105Q8TEF2 133 aa12.62□□□□□ -0.39
PCIF1-201ENST00000372409 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.62□□□□□ -0.393e-7■■■■□ 22.2
PCIF1-201ENST00000372409 EDN2P20800 178 aa12.62□□□□□ -0.39
PCIF1-201ENST00000372409 ATP5J2P56134 94 aa12.62□□□□□ -0.39
PCIF1-201ENST00000372409 CEND1Q8N111 149 aa12.62□□□□□ -0.39
PCIF1-201ENST00000372409 CACNA1AO00555 2505 aa12.62□□□□□ -0.39
PCIF1-201ENST00000372409 USP9XQ93008 2570 aaPredicted RBP12.61□□□□□ -0.39
PCIF1-201ENST00000372409 IGHV4-30-2A0A087WSY4 118 aa12.61□□□□□ -0.39
PCIF1-201ENST00000372409 A6NDX4 124 aa12.61□□□□□ -0.39
PCIF1-201ENST00000372409 H7C1H1 209 aa12.61□□□□□ -0.39
PCIF1-201ENST00000372409 CHTOPQ9Y3Y2 248 aaKnown RBP12.61□□□□□ -0.39
PCIF1-201ENST00000372409 F8VRH5 84 aa12.61□□□□□ -0.39
PCIF1-201ENST00000372409 DEFB104AQ8WTQ1 72 aa12.61□□□□□ -0.39
PCIF1-201ENST00000372409 H3BUA1 57 aa12.61□□□□□ -0.39
PCIF1-201ENST00000372409 SPOCK3Q9BQ16 436 aa12.61□□□□□ -0.39
PCIF1-201ENST00000372409 RNASE3P12724 160 aaKnown RBP12.6□□□□□ -0.39
PCIF1-201ENST00000372409 NEGR1Q7Z3B1 354 aa12.6□□□□□ -0.39
PCIF1-201ENST00000372409 TOMM6Q96B49 74 aa12.6□□□□□ -0.39
PCIF1-201ENST00000372409 C20orf78Q9BR46 151 aa12.6□□□□□ -0.39
PCIF1-201ENST00000372409 PRORYQ9H606 182 aa12.6□□□□□ -0.39
PCIF1-201ENST00000372409 DAZ1Q9NQZ3 744 aaKnown RBP12.6□□□□□ -0.39
PCIF1-201ENST00000372409 IGSF10Q6WRI0 2623 aa12.6□□□□□ -0.39
PCIF1-201ENST00000372409 TMEM95Q3KNT9 176 aa12.6□□□□□ -0.39
PCIF1-201ENST00000372409 C2orf66Q6UXQ4 117 aa12.59□□□□□ -0.39
PCIF1-201ENST00000372409 HIST1H4GQ99525 98 aa12.59□□□□□ -0.39
PCIF1-201ENST00000372409 OR5A1Q8NGJ0 315 aa12.59□□□□□ -0.39
PCIF1-201ENST00000372409 FAM19A4Q96LR4 140 aa12.59□□□□□ -0.39
PCIF1-201ENST00000372409 CSTL1Q9H114 145 aa12.59□□□□□ -0.39
PCIF1-201ENST00000372409 MSMBP08118 114 aa12.58□□□□□ -0.4
PCIF1-201ENST00000372409 CSPG4Q6UVK1 2322 aa12.58□□□□□ -0.4
PCIF1-201ENST00000372409 TRAV12-1A0A0B4J245 112 aa12.58□□□□□ -0.4
PCIF1-201ENST00000372409 HLA-DRB4P13762 266 aa12.58□□□□□ -0.4
PCIF1-201ENST00000372409 TM2D2Q9BX73 214 aa12.58□□□□□ -0.4
PCIF1-201ENST00000372409 HLA-DRB4X5D2U9 266 aa12.58□□□□□ -0.4
PCIF1-201ENST00000372409 USP9YO00507 2555 aaPredicted RBP12.57□□□□□ -0.4
PCIF1-201ENST00000372409 AGRNO00468 2067 aa12.57□□□□□ -0.4
PCIF1-201ENST00000372409 OR11H12B2RN74 326 aa12.57□□□□□ -0.4
PCIF1-201ENST00000372409 FAM159AQ6UWV7 190 aa12.57□□□□□ -0.4
PCIF1-201ENST00000372409 OR11H1Q8NG94 326 aa12.57□□□□□ -0.4
PCIF1-201ENST00000372409 OR11H2Q8NH07 326 aa12.57□□□□□ -0.4
PCIF1-201ENST00000372409 SLC25A16P16260 332 aa12.57□□□□□ -0.4
PCIF1-201ENST00000372409 NEXN-AS1Q8NBZ9 246 aa12.57□□□□□ -0.4
PCIF1-201ENST00000372409 RNF223E7ERA6 249 aa12.56□□□□□ -0.4
PCIF1-201ENST00000372409 BAALCQ8WXS3 180 aa12.56□□□□□ -0.4
PCIF1-201ENST00000372409 JPT2Q9H910 190 aa12.56□□□□□ -0.4
PCIF1-201ENST00000372409 MUC4Q99102 2169 aa12.56□□□□□ -0.4
PCIF1-201ENST00000372409 IGLV1-40P01703 118 aa12.56□□□□□ -0.4
PCIF1-201ENST00000372409 MED14OSP0DP75 135 aa12.56□□□□□ -0.4
PCIF1-201ENST00000372409 TRAV12-3A0A0B4J271 114 aa12.55□□□□□ -0.4
PCIF1-201ENST00000372409 NDUFS8O00217 210 aa12.55□□□□□ -0.4
PCIF1-201ENST00000372409 AVPP01185 164 aa12.55□□□□□ -0.4
PCIF1-201ENST00000372409 PHLDA1Q8WV24 401 aaPredicted RBP12.55□□□□□ -0.4
PCIF1-201ENST00000372409 A0A087WWL8 130 aa12.55□□□□□ -0.4
PCIF1-201ENST00000372409 F5H697 171 aa12.55□□□□□ -0.4
PCIF1-201ENST00000372409 IGKV3-20P01619 116 aa12.55□□□□□ -0.4
PCIF1-201ENST00000372409 CD7P09564 240 aa12.55□□□□□ -0.4
PCIF1-201ENST00000372409 ID1P41134 155 aa12.55□□□□□ -0.4
PCIF1-201ENST00000372409 ACACBO00763 2458 aa12.55□□□□□ -0.4
PCIF1-201ENST00000372409 BRI3O95415 125 aa12.54□□□□□ -0.4
PCIF1-201ENST00000372409 APRG1Q8IVJ8 170 aa12.54□□□□□ -0.4
PCIF1-201ENST00000372409 MYMXA0A1B0GTQ4 84 aa12.54□□□□□ -0.4
PCIF1-201ENST00000372409 PRSS29PA6NIE9 313 aa12.54□□□□□ -0.4
PCIF1-201ENST00000372409 SCGB2A2Q13296 93 aa12.54□□□□□ -0.4
PCIF1-201ENST00000372409 RIPPLY3P57055 190 aa12.53□□□□□ -0.4
PCIF1-201ENST00000372409 DUSP14O95147 198 aaKnown RBP12.53□□□□□ -0.4
PCIF1-201ENST00000372409 PPP1R17O96001 155 aa12.53□□□□□ -0.4
PCIF1-201ENST00000372409 ZNF688P0C7X2 276 aa12.53□□□□□ -0.4
PCIF1-201ENST00000372409 CYSLTR1Q9Y271 337 aa12.53□□□□□ -0.4
PCIF1-201ENST00000372409 FAM208BQ5VWN6 2430 aa12.53□□□□□ -0.4
PCIF1-201ENST00000372409 KLLNB2CW77 178 aa12.53□□□□□ -0.4
PCIF1-201ENST00000372409 C12orf74Q32Q52 190 aa12.53□□□□□ -0.4
PCIF1-201ENST00000372409 C10orf99Q6UWK7 81 aa12.53□□□□□ -0.4
PCIF1-201ENST00000372409 TRBV7-9A0A0J9YWB2 115 aa12.52□□□□□ -0.41
PCIF1-201ENST00000372409 RPL24P83731 157 aaKnown RBP12.52□□□□□ -0.41
PCIF1-201ENST00000372409 COTL1Q14019 142 aa12.52□□□□□ -0.41
PCIF1-201ENST00000372409 TAL2Q16559 108 aa12.52□□□□□ -0.41
PCIF1-201ENST00000372409 FAM74A4Q5TZK3 123 aa12.52□□□□□ -0.41
PCIF1-201ENST00000372409 DCANP1Q8TF63 244 aa12.52□□□□□ -0.41
PCIF1-201ENST00000372409 PRADC1Q9BSG0 188 aa12.52□□□□□ -0.41
PCIF1-201ENST00000372409 IGLL5B9A064 214 aa12.52□□□□□ -0.41
PCIF1-201ENST00000372409 EMP1P54849 157 aa12.52□□□□□ -0.41
PCIF1-201ENST00000372409 ZNF479Q96JC4 524 aa12.52□□□□□ -0.41
PCIF1-201ENST00000372409 TRAV12-2A0A075B6T6 113 aa12.51□□□□□ -0.41
PCIF1-201ENST00000372409 SUMO4Q6EEV6 95 aa12.51□□□□□ -0.41
PCIF1-201ENST00000372409 NRGNQ92686 78 aa12.51□□□□□ -0.41
PCIF1-201ENST00000372409 TP53TG1Q9Y2A0 90 aa12.51□□□□□ -0.41
PCIF1-201ENST00000372409 G3V4G9 280 aa12.51□□□□□ -0.41
PCIF1-201ENST00000372409 IGHV4-59P01825 116 aa12.51□□□□□ -0.41
PCIF1-201ENST00000372409 CFHR3Q02985 330 aa12.51□□□□□ -0.41
PCIF1-201ENST00000372409 KIF25-AS1Q9Y6Z4 181 aa12.51□□□□□ -0.41
PCIF1-201ENST00000372409 B4DSR2 109 aa12.5□□□□□ -0.41
PCIF1-201ENST00000372409 LINC00315P59091 139 aa12.5□□□□□ -0.41
PCIF1-201ENST00000372409 K7EMT4 169 aa12.5□□□□□ -0.41
PCIF1-201ENST00000372409 CD300EQ496F6 205 aaPredicted RBP12.5□□□□□ -0.41
PCIF1-201ENST00000372409 TRBV7-3A0A075B6L6 115 aa12.49□□□□□ -0.41
PCIF1-201ENST00000372409 ZNF815PA8K554 130 aa12.49□□□□□ -0.41
PCIF1-201ENST00000372409 NXPH4O95158 308 aa12.49□□□□□ -0.41
PCIF1-201ENST00000372409 LGALS1P09382 135 aaKnown RBP12.49□□□□□ -0.41
PCIF1-201ENST00000372409 SCGB1D4Q6XE38 83 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms