RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 MAP1LC3B2A6NCE7 125 aa12.84□□□□□ -0.35
TMEM53-201ENST00000372235 CRYGDP07320 174 aa12.84□□□□□ -0.35
TMEM53-201ENST00000372235 UBE2G2P60604 165 aa12.84□□□□□ -0.35
TMEM53-201ENST00000372235 UBE2G1P62253 170 aa12.84□□□□□ -0.35
TMEM53-201ENST00000372235 ZNF345Q14585 488 aa12.84□□□□□ -0.35
TMEM53-201ENST00000372235 ZNF506Q5JVG8 444 aa12.84□□□□□ -0.35
TMEM53-201ENST00000372235 WFDC10BQ8IUB3 73 aa12.84□□□□□ -0.35
TMEM53-201ENST00000372235 MAP1LC3BQ9GZQ8 125 aa12.84□□□□□ -0.35
TMEM53-201ENST00000372235 C11orf21Q9P2W6 132 aa12.84□□□□□ -0.35
TMEM53-201ENST00000372235 PCLOQ9Y6V0 5065 aa12.83□□□□□ -0.36
TMEM53-201ENST00000372235 RNASE3P12724 160 aaKnown RBP12.83□□□□□ -0.36
TMEM53-201ENST00000372235 COX8CQ7Z4L0 72 aa12.83□□□□□ -0.36
TMEM53-201ENST00000372235 SYT8Q8NBV8 401 aa12.83□□□□□ -0.36
TMEM53-201ENST00000372235 IL36BQ9NZH7 164 aa12.83□□□□□ -0.36
TMEM53-201ENST00000372235 PGPEP1LA6NFU8 196 aa12.82□□□□□ -0.36
TMEM53-201ENST00000372235 UMAD1C9J7I0 102 aa12.82□□□□□ -0.36
TMEM53-201ENST00000372235 KRTAP10-2P60368 255 aa12.82□□□□□ -0.36
TMEM53-201ENST00000372235 LINC01556Q5JQF7 62 aa12.82□□□□□ -0.36
TMEM53-201ENST00000372235 Q86TA4 180 aa12.82□□□□□ -0.36
TMEM53-201ENST00000372235 MAPKAPK5-AS1Q8N8E1 139 aa12.82□□□□□ -0.36
TMEM53-201ENST00000372235 LINC00479Q96M42 142 aa12.82□□□□□ -0.36
TMEM53-201ENST00000372235 TRAV34A0A0B4J273 112 aa12.81□□□□□ -0.36
TMEM53-201ENST00000372235 TRBV6-1A0A0K0K1D8 114 aa12.81□□□□□ -0.36
TMEM53-201ENST00000372235 B4DEV8 164 aa12.81□□□□□ -0.36
TMEM53-201ENST00000372235 FGF8P55075 233 aaPredicted RBP12.81□□□□□ -0.36
TMEM53-201ENST00000372235 EIF5AP63241 154 aaKnown RBP12.81□□□□□ -0.36
TMEM53-201ENST00000372235 OR10J3Q5JRS4 329 aa12.81□□□□□ -0.36
TMEM53-201ENST00000372235 DNLZQ5SXM8 178 aa12.81□□□□□ -0.36
TMEM53-201ENST00000372235 FAM162BQ5T6X4 162 aa12.81□□□□□ -0.36
TMEM53-201ENST00000372235 LELP1Q5T871 98 aa12.81□□□□□ -0.36
TMEM53-201ENST00000372235 GTSF1LQ9H1H1 148 aa12.81□□□□□ -0.36
TMEM53-201ENST00000372235 CYTL1Q9NRR1 136 aa12.81□□□□□ -0.36
TMEM53-201ENST00000372235 IGKV3D-20A0A0C4DH25 116 aa12.8□□□□□ -0.36
TMEM53-201ENST00000372235 A0A0D9SG52 128 aa12.8□□□□□ -0.36
TMEM53-201ENST00000372235 LOC100131303A0A0U1RQF7 123 aa12.8□□□□□ -0.36
TMEM53-201ENST00000372235 G3V3Q6 166 aa12.8□□□□□ -0.36
TMEM53-201ENST00000372235 RHODO00212 210 aa12.8□□□□□ -0.36
TMEM53-201ENST00000372235 S100A9P06702 114 aaKnown RBP12.8□□□□□ -0.36
TMEM53-201ENST00000372235 SEC11BP0C7V7 166 aa12.8□□□□□ -0.36
TMEM53-201ENST00000372235 LGALSLQ3ZCW2 172 aaPredicted RBP12.8□□□□□ -0.36
TMEM53-201ENST00000372235 ATP6V0E2Q8NHE4 81 aa12.8□□□□□ -0.36
TMEM53-201ENST00000372235 HMSDA8MTL9 139 aa12.79□□□□□ -0.36
TMEM53-201ENST00000372235 CST9LP1Q5W188 147 aa12.79□□□□□ -0.36
TMEM53-201ENST00000372235 DPPA3Q6W0C5 159 aa12.79□□□□□ -0.36
TMEM53-201ENST00000372235 KCNRGQ8N5I3 272 aa12.79□□□□□ -0.36
TMEM53-201ENST00000372235 PARLQ9H300 379 aa12.79□□□□□ -0.36
TMEM53-201ENST00000372235 RYR1P21817 5038 aa12.79□□□□□ -0.36
TMEM53-201ENST00000372235 A0A087WTM6 91 aa12.78□□□□□ -0.36
TMEM53-201ENST00000372235 IGHV3-73A0A0B4J1V6 119 aa12.78□□□□□ -0.36
TMEM53-201ENST00000372235 KANTRA0A1W2PQU2 76 aa12.78□□□□□ -0.36
TMEM53-201ENST00000372235 PSCAO43653 123 aa12.78□□□□□ -0.36
TMEM53-201ENST00000372235 A0A087WWC5 75 aa12.77□□□□□ -0.37
TMEM53-201ENST00000372235 Q8N1X5 172 aa12.77□□□□□ -0.37
TMEM53-201ENST00000372235 OR11H4Q8NGC9 324 aa12.77□□□□□ -0.37
TMEM53-201ENST00000372235 TNFRSF18Q9Y5U5 241 aa12.77□□□□□ -0.37
TMEM53-201ENST00000372235 IBA57-AS1B1ANH7 110 aa12.76□□□□□ -0.37
TMEM53-201ENST00000372235 KRBOX1C9JBD0 128 aa12.76□□□□□ -0.37
TMEM53-201ENST00000372235 PFDN1O60925 122 aa12.76□□□□□ -0.37
TMEM53-201ENST00000372235 LTAP01374 205 aa12.76□□□□□ -0.37
TMEM53-201ENST00000372235 AKR1C3P42330 323 aa12.76□□□□□ -0.37
TMEM53-201ENST00000372235 LAGE3Q14657 143 aa12.76□□□□□ -0.37
TMEM53-201ENST00000372235 ZC2HC1AQ96GY0 325 aa12.76□□□□□ -0.37
TMEM53-201ENST00000372235 PHLDA3Q9Y5J5 127 aa12.76□□□□□ -0.37
TMEM53-201ENST00000372235 ARMS2P0C7Q2 107 aa12.75□□□□□ -0.37
TMEM53-201ENST00000372235 TPT1P13693 172 aaKnown RBP12.75□□□□□ -0.37
TMEM53-201ENST00000372235 ZNF674Q2M3X9 581 aa12.75□□□□□ -0.37
TMEM53-201ENST00000372235 LINC01559Q495D7 138 aa12.75□□□□□ -0.37
TMEM53-201ENST00000372235 SFT2D1Q8WV19 159 aa12.75□□□□□ -0.37
TMEM53-201ENST00000372235 MBD3L1Q8WWY6 194 aa12.75□□□□□ -0.37
TMEM53-201ENST00000372235 H3BVH4 76 aa12.74□□□□□ -0.37
TMEM53-201ENST00000372235 SH2D1AO60880 128 aa12.74□□□□□ -0.37
TMEM53-201ENST00000372235 TOR2AQ5JU69 321 aa12.74□□□□□ -0.37
TMEM53-201ENST00000372235 ZFP82Q8N141 532 aa12.74□□□□□ -0.37
TMEM53-201ENST00000372235 TM2D2Q9BX73 214 aa12.74□□□□□ -0.37
TMEM53-201ENST00000372235 ZNF471Q9BX82 626 aaPredicted RBP12.74□□□□□ -0.37
TMEM53-201ENST00000372235 M0R036 132 aa12.73□□□□□ -0.37
TMEM53-201ENST00000372235 BCL2L11O43521 198 aa12.73□□□□□ -0.37
TMEM53-201ENST00000372235 CRIP1P50238 77 aa12.73□□□□□ -0.37
TMEM53-201ENST00000372235 FAM213BQ8TBF2 198 aa12.73□□□□□ -0.37
TMEM53-201ENST00000372235 NTN5Q8WTR8 489 aaPredicted RBP12.73□□□□□ -0.37
TMEM53-201ENST00000372235 PAGE4O60829 102 aa12.72□□□□□ -0.37
TMEM53-201ENST00000372235 DMRTA1Q5VZB9 504 aa12.72□□□□□ -0.37
TMEM53-201ENST00000372235 EIF5AL1Q6IS14 154 aaKnown RBP12.72□□□□□ -0.37
TMEM53-201ENST00000372235 UFSP1Q6NVU6 142 aa12.72□□□□□ -0.37
TMEM53-201ENST00000372235 SCRT2Q9NQ03 307 aa12.72□□□□□ -0.37
TMEM53-201ENST00000372235 TRAV8-3A0A0A6YYJ7 113 aa12.71□□□□□ -0.37
TMEM53-201ENST00000372235 GAGE12JA6NER3 117 aa12.71□□□□□ -0.37
TMEM53-201ENST00000372235 SMLR1H3BR10 107 aa12.71□□□□□ -0.37
TMEM53-201ENST00000372235 H2AFB1P0C5Y9 115 aa12.71□□□□□ -0.37
TMEM53-201ENST00000372235 GAGE1Q13065 139 aa12.71□□□□□ -0.37
TMEM53-201ENST00000372235 GAGE4Q13068 117 aa12.71□□□□□ -0.37
TMEM53-201ENST00000372235 GAGE5Q13069 117 aa12.71□□□□□ -0.37
TMEM53-201ENST00000372235 GAGE13Q4V321 117 aa12.71□□□□□ -0.37
TMEM53-201ENST00000372235 SFRP2Q96HF1 295 aa12.71□□□□□ -0.37
TMEM53-201ENST00000372235 TRBV10-1A0A0K0K1A3 114 aa12.7□□□□□ -0.38
TMEM53-201ENST00000372235 TEX46H3BTG2 121 aa12.7□□□□□ -0.38
TMEM53-201ENST00000372235 CXCL1P09341 107 aa12.7□□□□□ -0.38
TMEM53-201ENST00000372235 COX11Q9Y6N1 276 aa12.7□□□□□ -0.38
TMEM53-201ENST00000372235 URGCP-MRPS24S4R325 110 aa12.7□□□□□ -0.38
TMEM53-201ENST00000372235 GRIFINA4D1Z8 144 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms