RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 NFE4Q86UQ8 179 aa9.24□□□□□ -0.93
TNFRSF1A-202ENST00000366159 ARL2-SNX15V9GYD0 113 aa9.24□□□□□ -0.93
TNFRSF1A-202ENST00000366159 CRIP1P50238 77 aa9.23□□□□□ -0.93
TNFRSF1A-202ENST00000366159 FGF8P55075 233 aaPredicted RBP9.23□□□□□ -0.93
TNFRSF1A-202ENST00000366159 ZFP69Q49AA0 526 aa9.23□□□□□ -0.93
TNFRSF1A-202ENST00000366159 PIK3CD-AS1Q5SR53 167 aa9.23□□□□□ -0.93
TNFRSF1A-202ENST00000366159 NKX6-2Q9C056 277 aaPredicted RBP9.23□□□□□ -0.93
TNFRSF1A-202ENST00000366159 MSRB1Q9NZV6 116 aa9.23□□□□□ -0.93
TNFRSF1A-202ENST00000366159 FABP5P3A8MUU1 101 aa9.22□□□□□ -0.93
TNFRSF1A-202ENST00000366159 PEX7O00628 323 aa9.22□□□□□ -0.93
TNFRSF1A-202ENST00000366159 ARPC5O15511 151 aa9.22□□□□□ -0.93
TNFRSF1A-202ENST00000366159 EVI2AP22794 236 aa9.22□□□□□ -0.93
TNFRSF1A-202ENST00000366159 UBE2G2P60604 165 aa9.22□□□□□ -0.93
TNFRSF1A-202ENST00000366159 DNLZQ5SXM8 178 aa9.22□□□□□ -0.93
TNFRSF1A-202ENST00000366159 AKR1C8PQ5T2L2 129 aa9.22□□□□□ -0.93
TNFRSF1A-202ENST00000366159 Q86TA4 180 aa9.22□□□□□ -0.93
TNFRSF1A-202ENST00000366159 Q8N1X5 172 aa9.22□□□□□ -0.93
TNFRSF1A-202ENST00000366159 MAPKAPK5-AS1Q8N8E1 139 aa9.22□□□□□ -0.93
TNFRSF1A-202ENST00000366159 HIST1H2BAQ96A08 127 aa9.22□□□□□ -0.93
TNFRSF1A-202ENST00000366159 A0A087WTM6 91 aa9.21□□□□□ -0.94
TNFRSF1A-202ENST00000366159 IFNA7P01567 189 aa9.21□□□□□ -0.94
TNFRSF1A-202ENST00000366159 RHOHQ15669 191 aa9.21□□□□□ -0.94
TNFRSF1A-202ENST00000366159 LINC01556Q5JQF7 62 aa9.21□□□□□ -0.94
TNFRSF1A-202ENST00000366159 UFSP1Q6NVU6 142 aa9.21□□□□□ -0.94
TNFRSF1A-202ENST00000366159 Q6ZSN1 163 aa9.21□□□□□ -0.94
TNFRSF1A-202ENST00000366159 IGHV3-73A0A0B4J1V6 119 aa9.2□□□□□ -0.94
TNFRSF1A-202ENST00000366159 IGHV3-38A0A0C4DH36 116 aa9.2□□□□□ -0.94
TNFRSF1A-202ENST00000366159 TRBV6-1A0A0K0K1D8 114 aa9.2□□□□□ -0.94
TNFRSF1A-202ENST00000366159 MAP1LC3B2A6NCE7 125 aa9.2□□□□□ -0.94
TNFRSF1A-202ENST00000366159 LINC00694P0DN24 101 aa9.2□□□□□ -0.94
TNFRSF1A-202ENST00000366159 MGST1P10620 155 aaKnown RBP9.2□□□□□ -0.94
TNFRSF1A-202ENST00000366159 FHITP49789 147 aa9.2□□□□□ -0.94
TNFRSF1A-202ENST00000366159 PPT1P50897 306 aa9.2□□□□□ -0.94
TNFRSF1A-202ENST00000366159 ERVFC1-1P60608 527 aa9.2□□□□□ -0.94
TNFRSF1A-202ENST00000366159 CDPF1Q6NVV7 123 aa9.2□□□□□ -0.94
TNFRSF1A-202ENST00000366159 ZFP2Q6ZN57 461 aa9.2□□□□□ -0.94
TNFRSF1A-202ENST00000366159 NHLRC2Q8NBF2 726 aa9.2□□□□□ -0.94
TNFRSF1A-202ENST00000366159 ZC2HC1AQ96GY0 325 aa9.2□□□□□ -0.94
TNFRSF1A-202ENST00000366159 PRADC1Q9BSG0 188 aa9.2□□□□□ -0.94
TNFRSF1A-202ENST00000366159 MAP1LC3BQ9GZQ8 125 aa9.2□□□□□ -0.94
TNFRSF1A-202ENST00000366159 PARLQ9H300 379 aa9.2□□□□□ -0.94
TNFRSF1A-202ENST00000366159 IL36BQ9NZH7 164 aa9.2□□□□□ -0.94
TNFRSF1A-202ENST00000366159 KRBOX1C9JBD0 128 aa9.19□□□□□ -0.94
TNFRSF1A-202ENST00000366159 SMLR1H3BR10 107 aa9.19□□□□□ -0.94
TNFRSF1A-202ENST00000366159 CRYGDP07320 174 aa9.19□□□□□ -0.94
TNFRSF1A-202ENST00000366159 ZNF345Q14585 488 aa9.19□□□□□ -0.94
TNFRSF1A-202ENST00000366159 C10orf126Q8N4M7 172 aa9.19□□□□□ -0.94
TNFRSF1A-202ENST00000366159 KCNRGQ8N5I3 272 aa9.19□□□□□ -0.94
TNFRSF1A-202ENST00000366159 OR11H4Q8NGC9 324 aa9.19□□□□□ -0.94
TNFRSF1A-202ENST00000366159 ZFP30Q9Y2G7 519 aa9.19□□□□□ -0.94
TNFRSF1A-202ENST00000366159 FAT1Q14517 4588 aa9.18□□□□□ -0.94
TNFRSF1A-202ENST00000366159 A8MWV9 139 aa9.18□□□□□ -0.94
TNFRSF1A-202ENST00000366159 IBA57-AS1B1ANH7 110 aa9.18□□□□□ -0.94
TNFRSF1A-202ENST00000366159 FUSP35637 526 aaKnown RBP eCLIP9.18□□□□□ -0.94
TNFRSF1A-202ENST00000366159 ASIPP42127 132 aa9.18□□□□□ -0.94
TNFRSF1A-202ENST00000366159 ZNF674Q2M3X9 581 aa9.18□□□□□ -0.94
TNFRSF1A-202ENST00000366159 LELP1Q5T871 98 aa9.18□□□□□ -0.94
TNFRSF1A-202ENST00000366159 FMC1Q96HJ9 113 aa9.18□□□□□ -0.94
TNFRSF1A-202ENST00000366159 TCEAL7Q9BRU2 100 aa9.18□□□□□ -0.94
TNFRSF1A-202ENST00000366159 GTSF1LQ9H1H1 148 aa9.18□□□□□ -0.94
TNFRSF1A-202ENST00000366159 JPT2Q9H910 190 aa9.18□□□□□ -0.94
TNFRSF1A-202ENST00000366159 VPS13BQ7Z7G8 4022 aa9.18□□□□□ -0.94
TNFRSF1A-202ENST00000366159 DNAH8Q96JB1 4490 aa9.18□□□□□ -0.94
TNFRSF1A-202ENST00000366159 LRCOL1A6NCL2 159 aa9.17□□□□□ -0.94
TNFRSF1A-202ENST00000366159 HMSDA8MTL9 139 aa9.17□□□□□ -0.94
TNFRSF1A-202ENST00000366159 B4DEV8 164 aa9.17□□□□□ -0.94
TNFRSF1A-202ENST00000366159 EREGO14944 169 aa9.17□□□□□ -0.94
TNFRSF1A-202ENST00000366159 LTAP01374 205 aa9.17□□□□□ -0.94
TNFRSF1A-202ENST00000366159 SEC11BP0C7V7 166 aa9.17□□□□□ -0.94
TNFRSF1A-202ENST00000366159 MBD3L1Q8WWY6 194 aa9.17□□□□□ -0.94
TNFRSF1A-202ENST00000366159 SAMD10Q9BYL1 202 aa9.17□□□□□ -0.94
TNFRSF1A-202ENST00000366159 SCRT2Q9NQ03 307 aa9.17□□□□□ -0.94
TNFRSF1A-202ENST00000366159 Q9UF83 564 aa9.17□□□□□ -0.94
TNFRSF1A-202ENST00000366159 SH2D1AO60880 128 aa9.16□□□□□ -0.94
TNFRSF1A-202ENST00000366159 S100A4P26447 101 aaKnown RBP9.16□□□□□ -0.94
TNFRSF1A-202ENST00000366159 XGP55808 180 aa9.16□□□□□ -0.94
TNFRSF1A-202ENST00000366159 ATP6V0E2Q8NHE4 81 aa9.16□□□□□ -0.94
TNFRSF1A-202ENST00000366159 TRAV8-6A0A0B4J262 113 aa9.15□□□□□ -0.94
TNFRSF1A-202ENST00000366159 ARMS2P0C7Q2 107 aa9.15□□□□□ -0.94
TNFRSF1A-202ENST00000366159 OR10J3Q5JRS4 329 aa9.15□□□□□ -0.94
TNFRSF1A-202ENST00000366159 H3BVH4 76 aa9.14□□□□□ -0.95
TNFRSF1A-202ENST00000366159 PAGE4O60829 102 aa9.14□□□□□ -0.95
TNFRSF1A-202ENST00000366159 KRTAP10-1P60331 282 aa9.14□□□□□ -0.95
TNFRSF1A-202ENST00000366159 UBE2G1P62253 170 aa9.14□□□□□ -0.95
TNFRSF1A-202ENST00000366159 LGALSLQ3ZCW2 172 aaPredicted RBP9.14□□□□□ -0.95
TNFRSF1A-202ENST00000366159 FAM162BQ5T6X4 162 aa9.14□□□□□ -0.95
TNFRSF1A-202ENST00000366159 C14orf178Q8N769 122 aaPredicted RBP9.14□□□□□ -0.95
TNFRSF1A-202ENST00000366159 STOML3Q8TAV4 291 aa9.14□□□□□ -0.95
TNFRSF1A-202ENST00000366159 MLST8Q9BVC4 326 aa9.14□□□□□ -0.95
TNFRSF1A-202ENST00000366159 A0A0D9SG52 128 aa9.13□□□□□ -0.95
TNFRSF1A-202ENST00000366159 GRIFINA4D1Z8 144 aa9.13□□□□□ -0.95
TNFRSF1A-202ENST00000366159 UMAD1C9J7I0 102 aa9.13□□□□□ -0.95
TNFRSF1A-202ENST00000366159 M0R036 132 aa9.13□□□□□ -0.95
TNFRSF1A-202ENST00000366159 CST9LP1Q5W188 147 aa9.13□□□□□ -0.95
TNFRSF1A-202ENST00000366159 SFRP2Q96HF1 295 aa9.13□□□□□ -0.95
TNFRSF1A-202ENST00000366159 GAGE12JA6NER3 117 aa9.12□□□□□ -0.95
TNFRSF1A-202ENST00000366159 BCL2L11O43521 198 aa9.12□□□□□ -0.95
TNFRSF1A-202ENST00000366159 GAGE1Q13065 139 aa9.12□□□□□ -0.95
TNFRSF1A-202ENST00000366159 GAGE4Q13068 117 aa9.12□□□□□ -0.95
TNFRSF1A-202ENST00000366159 GAGE5Q13069 117 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms