RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 TGFBR1P36897 503 aa3.11□□□□□ -1.91
RNU4-39P-201ENST00000362455 KRTAP10-1P60331 282 aa3.11□□□□□ -1.91
RNU4-39P-201ENST00000362455 ERHP84090 104 aaKnown RBP3.11□□□□□ -1.91
RNU4-39P-201ENST00000362455 IDNKQ5T6J7 187 aa3.11□□□□□ -1.91
RNU4-39P-201ENST00000362455 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
RNU4-39P-201ENST00000362455 SLC25A34Q6PIV7 304 aa3.11□□□□□ -1.91
RNU4-39P-201ENST00000362455 TP53RKQ96S44 253 aa3.11□□□□□ -1.91
RNU4-39P-201ENST00000362455 IGKV1D-37A0A075B6S9 117 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 A0A0A6YYH2 397 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 A0A0J9YX75 114 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 ERICH4A6NGS2 130 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 A6NJ64 397 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 A8MWL6 223 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 OR7C2O60412 319 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 SMR3BP02814 79 aaPredicted RBP3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 DEFB130BP0DP73 79 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 DEFB130AP0DP74 79 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 PRB4P10163 310 aaPredicted RBP3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 OR10J1P30954 320 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 SNCAP37840 140 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 CBX5P45973 191 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 HSPA13P48723 471 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 TAS2R20P59543 309 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 YPEL3P61236 119 aaPredicted RBP3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 DAD1P61803 113 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 SNRPD3P62318 126 aaKnown RBP3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 PSG9Q00887 426 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 ESRGQ1W209 222 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 SP6Q3SY56 376 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 DNLZQ5SXM8 178 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 Q5VSD8 79 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 FAM78BQ5VT40 261 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 FOXI2Q6ZQN5 318 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 SSX7Q7RTT5 188 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 C15orf53Q8NAA6 179 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 OR5H2Q8NGV7 314 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 LHFPL5Q8TAF8 219 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 GPR146Q96CH1 333 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 RMI2Q96E14 147 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 LINC00052Q96N35 136 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 PRO0628Q9UI54 55 aa3.1□□□□□ -1.91
RNU4-39P-201ENST00000362455 TRAV30A0A087WSZ9 112 aa3.09□□□□□ -1.91
RNU4-39P-201ENST00000362455 TRAV8-2A0A0B4J237 113 aa3.09□□□□□ -1.91
RNU4-39P-201ENST00000362455 F5H768 121 aa3.09□□□□□ -1.91
RNU4-39P-201ENST00000362455 RD3LP0DJH9 198 aa3.09□□□□□ -1.91
RNU4-39P-201ENST00000362455 PSMB9P28065 219 aa3.09□□□□□ -1.91
RNU4-39P-201ENST00000362455 AP2S1P53680 142 aaPredicted RBP3.09□□□□□ -1.91
RNU4-39P-201ENST00000362455 HAMPP81172 84 aa3.09□□□□□ -1.91
RNU4-39P-201ENST00000362455 ZNF90Q03938 601 aa3.09□□□□□ -1.91
RNU4-39P-201ENST00000362455 BTN1A1Q13410 526 aa3.09□□□□□ -1.91
RNU4-39P-201ENST00000362455 RRN3P1Q2M238 152 aa3.09□□□□□ -1.91
RNU4-39P-201ENST00000362455 IGFL1Q6UW32 110 aa3.09□□□□□ -1.91
RNU4-39P-201ENST00000362455 FAM19A1Q7Z5A9 133 aa3.09□□□□□ -1.91
RNU4-39P-201ENST00000362455 LHFPL1Q86WI0 220 aa3.09□□□□□ -1.91
RNU4-39P-201ENST00000362455 MIR7-3HGQ8N6C7 128 aa3.09□□□□□ -1.91
RNU4-39P-201ENST00000362455 OR4B1Q8NGF8 309 aa3.09□□□□□ -1.91
RNU4-39P-201ENST00000362455 Q8WTZ3 238 aa3.09□□□□□ -1.91
RNU4-39P-201ENST00000362455 BORCS5Q969J3 196 aa3.09□□□□□ -1.91
RNU4-39P-201ENST00000362455 IGF2BP2-AS1Q96M15 143 aa3.09□□□□□ -1.91
RNU4-39P-201ENST00000362455 CNBD2Q96M20 576 aa3.09□□□□□ -1.91
RNU4-39P-201ENST00000362455 SND1-IT1Q9HBX3 110 aa3.09□□□□□ -1.91
RNU4-39P-201ENST00000362455 DIABLOQ9NR28 239 aa3.09□□□□□ -1.91
RNU4-39P-201ENST00000362455 IGKV1OR2-108A0A075B7D4 117 aa3.08□□□□□ -1.92
RNU4-39P-201ENST00000362455 A0A1B0GW15 77 aa3.08□□□□□ -1.92
RNU4-39P-201ENST00000362455 M0R2Z0 102 aa3.08□□□□□ -1.92
RNU4-39P-201ENST00000362455 TSPOP30536 169 aa3.08□□□□□ -1.92
RNU4-39P-201ENST00000362455 EIF2B2P49770 351 aaKnown RBP3.08□□□□□ -1.92
RNU4-39P-201ENST00000362455 CCL18P55774 89 aa3.08□□□□□ -1.92
RNU4-39P-201ENST00000362455 SPCS3P61009 180 aa3.08□□□□□ -1.92
RNU4-39P-201ENST00000362455 BAP18Q8IXM2 172 aa3.08□□□□□ -1.92
RNU4-39P-201ENST00000362455 LINC00337Q8N6G1 96 aa3.08□□□□□ -1.92
RNU4-39P-201ENST00000362455 ORAOV1Q8WV07 137 aa3.08□□□□□ -1.92
RNU4-39P-201ENST00000362455 S100A16Q96FQ6 103 aaKnown RBP3.08□□□□□ -1.92
RNU4-39P-201ENST00000362455 SMIM8Q96KF7 97 aa3.08□□□□□ -1.92
RNU4-39P-201ENST00000362455 UPK3BQ9BT76 320 aa3.08□□□□□ -1.92
RNU4-39P-201ENST00000362455 IFT46Q9NQC8 304 aa3.08□□□□□ -1.92
RNU4-39P-201ENST00000362455 ZNF586Q9NXT0 402 aa3.08□□□□□ -1.92
RNU4-39P-201ENST00000362455 SSR3Q9UNL2 185 aa3.08□□□□□ -1.92
RNU4-39P-201ENST00000362455 TRAV12-2A0A075B6T6 113 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 C3orf85A0A1B0GTC6 90 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 SPRR5A0A1B0GTR4 108 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 CORTO00230 105 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 TCAPO15273 167 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 CDS2O95674 445 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 ATP5G1P05496 136 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 SLC25A4P12235 298 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 HTR2BP41595 481 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 ATP5G3P48201 142 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 PSMB3P49720 205 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 AKR1C2P52895 323 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 PIGPP57054 158 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 GABARAPL2P60520 117 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 SPINK13Q1W4C9 94 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 KRTAP13-2Q52LG2 175 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 NMSQ5H8A3 153 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 TMEM69Q5SWH9 247 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 LPCAT3Q6P1A2 487 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 IZUMO2Q6UXV1 221 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.07□□□□□ -1.92
RNU4-39P-201ENST00000362455 PRNTQ86SH4 94 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 463.8 ms