RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 TMEM213A2RRL7 107 aa7.69□□□□□ -1.18
CUX1-203ENST00000360264 K7EQD1 137 aa7.69□□□□□ -1.18
CUX1-203ENST00000360264 C17orf58Q2M2W7 97 aa7.69□□□□□ -1.18
CUX1-203ENST00000360264 PRR25Q96S07 402 aa7.69□□□□□ -1.18
CUX1-203ENST00000360264 DEFB104AQ8WTQ1 72 aa7.68□□□□□ -1.18
CUX1-203ENST00000360264 XCL1P47992 114 aa7.68□□□□□ -1.18
CUX1-203ENST00000360264 IGFBPL1Q8WX77 278 aa7.68□□□□□ -1.18
CUX1-203ENST00000360264 F6UB75 175 aa7.68□□□□□ -1.18
CUX1-203ENST00000360264 CARD19Q96LW7 228 aa7.68□□□□□ -1.18
CUX1-203ENST00000360264 IGLV3-9A0A075B6K5 115 aa7.68□□□□□ -1.18
CUX1-203ENST00000360264 ZNF664Q8N3J9 261 aa7.68□□□□□ -1.18
CUX1-203ENST00000360264 IGHV2-5P01817 119 aa7.67□□□□□ -1.18
CUX1-203ENST00000360264 SPART-AS1P0CW21 52 aa7.67□□□□□ -1.18
CUX1-203ENST00000360264 NAA38Q9BRA0 125 aaKnown RBP7.67□□□□□ -1.18
CUX1-203ENST00000360264 MRPL51Q4U2R6 128 aaKnown RBP7.67□□□□□ -1.18
CUX1-203ENST00000360264 OPRPNQ99935 248 aaPredicted RBP7.67□□□□□ -1.18
CUX1-203ENST00000360264 ANKRD29Q8N6D5 301 aa7.67□□□□□ -1.18
CUX1-203ENST00000360264 NPBQ8NG41 125 aa7.67□□□□□ -1.18
CUX1-203ENST00000360264 COX7A2LO14548 114 aa7.67□□□□□ -1.18
CUX1-203ENST00000360264 ANXA2RQ3ZCQ2 193 aa7.67□□□□□ -1.18
CUX1-203ENST00000360264 SMIM20Q8N5G0 67 aa7.67□□□□□ -1.18
CUX1-203ENST00000360264 RPL18AQ02543 176 aaKnown RBP7.67□□□□□ -1.18
CUX1-203ENST00000360264 LTAP01374 205 aa7.66□□□□□ -1.18
CUX1-203ENST00000360264 MLANAQ16655 118 aa7.66□□□□□ -1.18
CUX1-203ENST00000360264 LOXP28300 417 aaPredicted RBP7.66□□□□□ -1.18
CUX1-203ENST00000360264 VOPP1Q96AW1 172 aa7.66□□□□□ -1.18
CUX1-203ENST00000360264 UBE2AP49459 152 aa7.66□□□□□ -1.18
CUX1-203ENST00000360264 HOXB4P17483 251 aaPredicted RBP7.66□□□□□ -1.18
CUX1-203ENST00000360264 ZC2HC1AQ96GY0 325 aa7.66□□□□□ -1.18
CUX1-203ENST00000360264 C15orf65H3BRN8 121 aa7.66□□□□□ -1.18
CUX1-203ENST00000360264 FXYD5Q96DB9 178 aa7.66□□□□□ -1.18
CUX1-203ENST00000360264 COL4A1P02462 1669 aa7.66□□□□□ -1.18
CUX1-203ENST00000360264 CXCL5P42830 114 aa7.66□□□□□ -1.18
CUX1-203ENST00000360264 KLHDC3Q9BQ90 382 aa7.66□□□□□ -1.18
CUX1-203ENST00000360264 Q9H8V8 135 aa7.66□□□□□ -1.18
CUX1-203ENST00000360264 ATP5G1P05496 136 aa7.65□□□□□ -1.18
CUX1-203ENST00000360264 PYY3Q5JQD4 70 aa7.65□□□□□ -1.18
CUX1-203ENST00000360264 Q6ZRM9 215 aa7.65□□□□□ -1.18
CUX1-203ENST00000360264 CAMK2N2Q96S95 79 aa7.65□□□□□ -1.18
CUX1-203ENST00000360264 IGKV1-39P01597 117 aa7.65□□□□□ -1.18
CUX1-203ENST00000360264 IGKV1D-39P04432 117 aa7.65□□□□□ -1.18
CUX1-203ENST00000360264 PTPRSQ13332 1948 aa7.65□□□□□ -1.18
CUX1-203ENST00000360264 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.65□□□□□ -1.18
CUX1-203ENST00000360264 RBM3P98179 157 aaKnown RBP7.65□□□□□ -1.18
CUX1-203ENST00000360264 NDUFA1O15239 70 aa7.65□□□□□ -1.18
CUX1-203ENST00000360264 GYPEP15421 78 aa7.65□□□□□ -1.18
CUX1-203ENST00000360264 ACYP1P07311 99 aa7.65□□□□□ -1.19
CUX1-203ENST00000360264 GP9P14770 177 aa7.65□□□□□ -1.19
CUX1-203ENST00000360264 WIPF2Q8TF74 440 aaPredicted RBP7.65□□□□□ -1.19
CUX1-203ENST00000360264 INSL3P51460 131 aa7.65□□□□□ -1.19
CUX1-203ENST00000360264 ATP6V0E2Q8NHE4 81 aa7.65□□□□□ -1.19
CUX1-203ENST00000360264 IGLC1P0CG04 106 aa7.64□□□□□ -1.19
CUX1-203ENST00000360264 VSIG2Q96IQ7 327 aa7.64□□□□□ -1.19
CUX1-203ENST00000360264 LINC00479Q96M42 142 aa7.64□□□□□ -1.19
CUX1-203ENST00000360264 NPYP01303 97 aa7.64□□□□□ -1.19
CUX1-203ENST00000360264 LTBP1Q14766 1721 aa7.64□□□□□ -1.19
CUX1-203ENST00000360264 MESP1Q9BRJ9 268 aa7.64□□□□□ -1.19
CUX1-203ENST00000360264 LRP4O75096 1905 aa7.64□□□□□ -1.19
CUX1-203ENST00000360264 MYCNOSP40205 109 aa7.64□□□□□ -1.19
CUX1-203ENST00000360264 IGF2-ASQ6U949 168 aa7.64□□□□□ -1.19
CUX1-203ENST00000360264 ADAMTS20P59510 1910 aa7.63□□□□□ -1.19
CUX1-203ENST00000360264 U3KQE9 123 aa7.63□□□□□ -1.19
CUX1-203ENST00000360264 TRBV7-3A0A075B6L6 115 aa7.63□□□□□ -1.19
CUX1-203ENST00000360264 NDUFS7O75251 213 aa7.63□□□□□ -1.19
CUX1-203ENST00000360264 ETDBQ3ZM63 59 aa7.63□□□□□ -1.19
CUX1-203ENST00000360264 RAI1Q7Z5J4 1906 aaPredicted RBP7.63□□□□□ -1.19
CUX1-203ENST00000360264 LINC01620Q4KN68 170 aa7.63□□□□□ -1.19
CUX1-203ENST00000360264 SLX1AQ9BQ83 275 aa7.63□□□□□ -1.19
CUX1-203ENST00000360264 A0A1B0GX51 115 aa7.63□□□□□ -1.19
CUX1-203ENST00000360264 BAALC-AS2P0C853 105 aa7.63□□□□□ -1.19
CUX1-203ENST00000360264 A0A1W2PPM0 123 aa7.63□□□□□ -1.19
CUX1-203ENST00000360264 C11orf52Q96A22 123 aa7.63□□□□□ -1.19
CUX1-203ENST00000360264 K7EP13 123 aa7.62□□□□□ -1.19
CUX1-203ENST00000360264 SEC61GP60059 68 aa7.62□□□□□ -1.19
CUX1-203ENST00000360264 IGHV3-38A0A0C4DH36 116 aa7.62□□□□□ -1.19
CUX1-203ENST00000360264 CLPSL2Q6UWE3 100 aa7.62□□□□□ -1.19
CUX1-203ENST00000360264 V9GYV3 84 aa7.62□□□□□ -1.19
CUX1-203ENST00000360264 IGKV1-6A0A0C4DH72 117 aa7.62□□□□□ -1.19
CUX1-203ENST00000360264 KIR2DL5BQ8NHK3 375 aa7.62□□□□□ -1.19
CUX1-203ENST00000360264 NDUFC2O95298 119 aa7.62□□□□□ -1.19
CUX1-203ENST00000360264 IGHV2-70P01814 119 aa7.62□□□□□ -1.19
CUX1-203ENST00000360264 POLR3KQ9Y2Y1 108 aaPredicted RBP7.62□□□□□ -1.19
CUX1-203ENST00000360264 PDE6GP18545 87 aa7.62□□□□□ -1.19
CUX1-203ENST00000360264 TRAV26-2A0A0B4J265 109 aa7.62□□□□□ -1.19
CUX1-203ENST00000360264 IGLC7A0M8Q6 106 aa7.62□□□□□ -1.19
CUX1-203ENST00000360264 C4orf3Q8WVX3 66 aa7.62□□□□□ -1.19
CUX1-203ENST00000360264 IGLC2P0DOY2 106 aa7.62□□□□□ -1.19
CUX1-203ENST00000360264 IGLC3P0DOY3 106 aa7.62□□□□□ -1.19
CUX1-203ENST00000360264 MAPK1IP1LQ8NDC0 245 aa7.62□□□□□ -1.19
CUX1-203ENST00000360264 CRYGCP07315 174 aa7.62□□□□□ -1.19
CUX1-203ENST00000360264 LINC00205P59089 165 aa7.62□□□□□ -1.19
CUX1-203ENST00000360264 PLA2G2CQ5R387 149 aa7.61□□□□□ -1.19
CUX1-203ENST00000360264 POU2AF1Q16633 256 aa7.61□□□□□ -1.19
CUX1-203ENST00000360264 DEFB113Q30KQ7 82 aa7.61□□□□□ -1.19
CUX1-203ENST00000360264 PRB4P10163 310 aaPredicted RBP7.61□□□□□ -1.19
CUX1-203ENST00000360264 PRSS33Q8NF86 280 aa7.61□□□□□ -1.19
CUX1-203ENST00000360264 PIFOQ8TCI5 191 aa7.61□□□□□ -1.19
CUX1-203ENST00000360264 SMAD5-AS1Q9Y6J3 95 aa7.61□□□□□ -1.19
CUX1-203ENST00000360264 A0A096LPF7 62 aa7.61□□□□□ -1.19
CUX1-203ENST00000360264 GAGE12HA6NDE8 117 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms