RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 OR11H1Q8NG94 326 aa13.66□□□□□ -0.22
PDLIM7-203ENST00000359895 EREGO14944 169 aa13.66□□□□□ -0.22
PDLIM7-203ENST00000359895 NXPH4O95158 308 aa13.66□□□□□ -0.22
PDLIM7-203ENST00000359895 GAS8-AS1O95177 125 aa13.66□□□□□ -0.22
PDLIM7-203ENST00000359895 RNASE3P12724 160 aaKnown RBP13.66□□□□□ -0.22
PDLIM7-203ENST00000359895 FCER1GP30273 86 aa13.66□□□□□ -0.22
PDLIM7-203ENST00000359895 SCGB2A2Q13296 93 aa13.66□□□□□ -0.22
PDLIM7-203ENST00000359895 DEFB136Q30KP8 78 aa13.66□□□□□ -0.22
PDLIM7-203ENST00000359895 H0Y8G0 127 aa13.65□□□□□ -0.22
PDLIM7-203ENST00000359895 GATA1P15976 413 aaPredicted RBP13.65□□□□□ -0.22
PDLIM7-203ENST00000359895 KRTAP1-1Q07627 177 aa13.65□□□□□ -0.22
PDLIM7-203ENST00000359895 KHDC1LQ5JSQ8 128 aa13.65□□□□□ -0.22
PDLIM7-203ENST00000359895 ADAMTSL5Q6ZMM2 481 aa13.65□□□□□ -0.22
PDLIM7-203ENST00000359895 Q6ZN92 141 aa13.65□□□□□ -0.22
PDLIM7-203ENST00000359895 OR9G4Q8NGQ1 327 aa13.65□□□□□ -0.22
PDLIM7-203ENST00000359895 AP1S3Q96PC3 154 aa13.65□□□□□ -0.22
PDLIM7-203ENST00000359895 YAE1D1Q9NRH1 226 aa13.65□□□□□ -0.22
PDLIM7-203ENST00000359895 ZNF469Q96JG9 3925 aaPredicted RBP13.65□□□□□ -0.23
PDLIM7-203ENST00000359895 TRAV12-3A0A0B4J271 114 aa13.64□□□□□ -0.23
PDLIM7-203ENST00000359895 CDKN1BP46527 198 aa13.64□□□□□ -0.23
PDLIM7-203ENST00000359895 HNRNPA3P51991 378 aaKnown RBP13.64□□□□□ -0.23
PDLIM7-203ENST00000359895 LGALS9BQ3B8N2 356 aa13.64□□□□□ -0.23
PDLIM7-203ENST00000359895 LGALS9CQ6DKI2 356 aa13.64□□□□□ -0.23
PDLIM7-203ENST00000359895 KLHL30-AS1Q8NEE0 82 aa13.64□□□□□ -0.23
PDLIM7-203ENST00000359895 IFI27L1Q96BM0 104 aa13.64□□□□□ -0.23
PDLIM7-203ENST00000359895 ZANQ9Y493 2812 aa13.64□□□□□ -0.23
PDLIM7-203ENST00000359895 IGLV2-18A0A075B6J9 118 aa13.63□□□□□ -0.23
PDLIM7-203ENST00000359895 ITPR3Q14573 2671 aa13.63□□□□□ -0.23
PDLIM7-203ENST00000359895 PPP1R17O96001 155 aa13.62□□□□□ -0.23
PDLIM7-203ENST00000359895 TRAV26-2A0A0B4J265 109 aa13.62□□□□□ -0.23
PDLIM7-203ENST00000359895 hDV102S1A0JD36 115 aa13.61□□□□□ -0.23
PDLIM7-203ENST00000359895 CD7P09564 240 aa13.61□□□□□ -0.23
PDLIM7-203ENST00000359895 FXYD7P58549 80 aa13.61□□□□□ -0.23
PDLIM7-203ENST00000359895 C14orf178Q8N769 122 aaPredicted RBP13.61□□□□□ -0.23
PDLIM7-203ENST00000359895 POM121L12Q8N7R1 296 aa13.61□□□□□ -0.23
PDLIM7-203ENST00000359895 C20orf78Q9BR46 151 aa13.61□□□□□ -0.23
PDLIM7-203ENST00000359895 MRPS16Q9Y3D3 137 aaKnown RBP13.61□□□□□ -0.23
PDLIM7-203ENST00000359895 LAGE3Q14657 143 aa13.6□□□□□ -0.23
PDLIM7-203ENST00000359895 DYNLRB2Q8TF09 96 aa13.6□□□□□ -0.23
PDLIM7-203ENST00000359895 DLX4Q92988 240 aaPredicted RBP13.6□□□□□ -0.23
PDLIM7-203ENST00000359895 ESM1Q9NQ30 184 aa13.6□□□□□ -0.23
PDLIM7-203ENST00000359895 GOLT1BQ9Y3E0 138 aa13.6□□□□□ -0.23
PDLIM7-203ENST00000359895 A0A1B0GV90 55 aa13.59□□□□□ -0.23
PDLIM7-203ENST00000359895 A8MTW9 85 aa13.59□□□□□ -0.23
PDLIM7-203ENST00000359895 K7EMI3 77 aa13.59□□□□□ -0.23
PDLIM7-203ENST00000359895 IGKV3-20P01619 116 aa13.59□□□□□ -0.23
PDLIM7-203ENST00000359895 SMIM17P0DL12 118 aa13.59□□□□□ -0.23
PDLIM7-203ENST00000359895 AMTNQ6UX39 209 aa13.59□□□□□ -0.23
PDLIM7-203ENST00000359895 MCRIP2Q9BUT9 160 aaKnown RBP13.59□□□□□ -0.23
PDLIM7-203ENST00000359895 SMIM2Q9BVW6 85 aa13.59□□□□□ -0.23
PDLIM7-203ENST00000359895 MUC4Q99102 2169 aa13.59□□□□□ -0.23
PDLIM7-203ENST00000359895 FLNAP21333 2647 aaKnown RBP13.59□□□□□ -0.23
PDLIM7-203ENST00000359895 IGHV1OR15-1A0A075B7D0 117 aa13.58□□□□□ -0.23
PDLIM7-203ENST00000359895 RNASE1P07998 156 aaKnown RBP13.58□□□□□ -0.23
PDLIM7-203ENST00000359895 MGPP08493 103 aa13.58□□□□□ -0.23
PDLIM7-203ENST00000359895 SPINK13Q1W4C9 94 aa13.58□□□□□ -0.23
PDLIM7-203ENST00000359895 TMEM158Q8WZ71 300 aa13.58□□□□□ -0.23
PDLIM7-203ENST00000359895 C9orf85Q96MD7 179 aa13.58□□□□□ -0.23
PDLIM7-203ENST00000359895 C16orf95Q9H693 158 aa13.58□□□□□ -0.23
PDLIM7-203ENST00000359895 IGHV3-16A0A0C4DH30 117 aa13.58□□□□□ -0.24
PDLIM7-203ENST00000359895 SPRY2O43597 315 aa13.58□□□□□ -0.24
PDLIM7-203ENST00000359895 ATP5LO75964 103 aa13.58□□□□□ -0.24
PDLIM7-203ENST00000359895 SYT8Q8NBV8 401 aa13.58□□□□□ -0.24
PDLIM7-203ENST00000359895 RASL10AQ92737 203 aa13.58□□□□□ -0.24
PDLIM7-203ENST00000359895 DUX3Q96PT4 197 aa13.58□□□□□ -0.24
PDLIM7-203ENST00000359895 PMCHL2Q9BQD1 86 aa13.58□□□□□ -0.24
PDLIM7-203ENST00000359895 ZMAT5Q9UDW3 170 aaKnown RBP13.58□□□□□ -0.24
PDLIM7-203ENST00000359895 TRAV12-2A0A075B6T6 113 aa13.57□□□□□ -0.24
PDLIM7-203ENST00000359895 HLA-DRB4P13762 266 aa13.57□□□□□ -0.24
PDLIM7-203ENST00000359895 DEFB131AP59861 70 aa13.57□□□□□ -0.24
PDLIM7-203ENST00000359895 SUMO2P61956 95 aaKnown RBP13.57□□□□□ -0.24
PDLIM7-203ENST00000359895 TMEM61Q8N0U2 210 aa13.57□□□□□ -0.24
PDLIM7-203ENST00000359895 TMEM160Q9NX00 188 aa13.57□□□□□ -0.24
PDLIM7-203ENST00000359895 KIF25-AS1Q9Y6Z4 181 aa13.57□□□□□ -0.24
PDLIM7-203ENST00000359895 HLA-DRB4X5D2U9 266 aa13.57□□□□□ -0.24
PDLIM7-203ENST00000359895 AGRNO00468 2067 aa13.56□□□□□ -0.24
PDLIM7-203ENST00000359895 TRGV11A0A075B6L2 103 aa13.56□□□□□ -0.24
PDLIM7-203ENST00000359895 NUTF2P61970 127 aaKnown RBP13.56□□□□□ -0.24
PDLIM7-203ENST00000359895 DEFB114Q30KQ6 69 aa13.56□□□□□ -0.24
PDLIM7-203ENST00000359895 ORMDL2Q53FV1 153 aa13.56□□□□□ -0.24
PDLIM7-203ENST00000359895 SLC25A34Q6PIV7 304 aa13.56□□□□□ -0.24
PDLIM7-203ENST00000359895 MXRA5Q9NR99 2828 aa13.56□□□□□ -0.24
PDLIM7-203ENST00000359895 TRAV25A0A0B4J276 109 aa13.55□□□□□ -0.24
PDLIM7-203ENST00000359895 FHL3Q13643 280 aa13.54□□□□□ -0.24
PDLIM7-203ENST00000359895 ZNF418Q8TF45 676 aaPredicted RBP13.54□□□□□ -0.24
PDLIM7-203ENST00000359895 RAX2Q96IS3 184 aa13.54□□□□□ -0.24
PDLIM7-203ENST00000359895 C18orf15Q96N68 181 aa13.54□□□□□ -0.24
PDLIM7-203ENST00000359895 SPAG8Q99932 426 aaPredicted RBP13.54□□□□□ -0.24
PDLIM7-203ENST00000359895 KNCNA6PVL3 124 aa13.54□□□□□ -0.24
PDLIM7-203ENST00000359895 H3BMM0 161 aa13.54□□□□□ -0.24
PDLIM7-203ENST00000359895 LINC00315P59091 139 aa13.54□□□□□ -0.24
PDLIM7-203ENST00000359895 RPL32P62910 135 aaKnown RBP13.54□□□□□ -0.24
PDLIM7-203ENST00000359895 Q8N1Y9 231 aa13.54□□□□□ -0.24
PDLIM7-203ENST00000359895 TCAPO15273 167 aa13.53□□□□□ -0.24
PDLIM7-203ENST00000359895 CD28P10747 220 aa13.53□□□□□ -0.24
PDLIM7-203ENST00000359895 MAP6D1Q9H9H5 199 aa13.53□□□□□ -0.24
PDLIM7-203ENST00000359895 TSSC4Q9Y5U2 329 aaPredicted RBP13.53□□□□□ -0.24
PDLIM7-203ENST00000359895 CCL24O00175 119 aa13.52□□□□□ -0.25
PDLIM7-203ENST00000359895 NUDT3O95989 172 aa13.52□□□□□ -0.25
PDLIM7-203ENST00000359895 PRSS1P07477 247 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms