RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 SMIM13P0DJ93 91 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 Q5PR19 223 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 SAMD13Q5VXD3 122 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 C20orf173Q96LM9 149 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 DUX3Q96PT4 197 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 TTTY13Q9BZ97 58 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 C11orf21Q9P2W6 132 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 CYSLTR1Q9Y271 337 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 SEC11AP67812 179 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 KIR3DS1Q14943 382 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 OR1N2Q8NGR9 330 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 SMIM2Q9BVW6 85 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 MEGF9Q9H1U4 602 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 H3BUA1 57 aa8.53□□□□□ -1.04
SSU72-202ENST00000359060 DEFB136Q30KP8 78 aa8.53□□□□□ -1.04
SSU72-202ENST00000359060 CD300EQ496F6 205 aaPredicted RBP8.53□□□□□ -1.04
SSU72-202ENST00000359060 RPL39LQ96EH5 51 aaKnown RBP8.53□□□□□ -1.04
SSU72-202ENST00000359060 DGAT2L7PQ6IED9 249 aa8.53□□□□□ -1.04
SSU72-202ENST00000359060 C10orf99Q6UWK7 81 aa8.53□□□□□ -1.04
SSU72-202ENST00000359060 SCRT2Q9NQ03 307 aa8.53□□□□□ -1.04
SSU72-202ENST00000359060 HOXA3O43365 443 aaPredicted RBP8.53□□□□□ -1.04
SSU72-202ENST00000359060 MRAP2Q96G30 205 aa8.53□□□□□ -1.04
SSU72-202ENST00000359060 CD5LO43866 347 aa8.52□□□□□ -1.05
SSU72-202ENST00000359060 DUSP14O95147 198 aaKnown RBP8.52□□□□□ -1.05
SSU72-202ENST00000359060 AVPP01185 164 aa8.52□□□□□ -1.05
SSU72-202ENST00000359060 DEFB131AP59861 70 aa8.52□□□□□ -1.05
SSU72-202ENST00000359060 C2orf66Q6UXQ4 117 aa8.52□□□□□ -1.05
SSU72-202ENST00000359060 LENEPQ9Y5L5 61 aa8.52□□□□□ -1.05
SSU72-202ENST00000359060 RAX2Q96IS3 184 aa8.52□□□□□ -1.05
SSU72-202ENST00000359060 Q96MF0 132 aa8.52□□□□□ -1.05
SSU72-202ENST00000359060 TCTEX1D4Q5JR98 221 aa8.51□□□□□ -1.05
SSU72-202ENST00000359060 LINC01587Q99440 93 aa8.51□□□□□ -1.05
SSU72-202ENST00000359060 IGHG4P01861 327 aa8.51□□□□□ -1.05
SSU72-202ENST00000359060 ZNF876PQ49A33 203 aa8.51□□□□□ -1.05
SSU72-202ENST00000359060 SPCS1Q9Y6A9 102 aa8.51□□□□□ -1.05
SSU72-202ENST00000359060 CRXO43186 299 aaPredicted RBP8.51□□□□□ -1.05
SSU72-202ENST00000359060 SFTA2Q6UW10 78 aa8.51□□□□□ -1.05
SSU72-202ENST00000359060 COL12A1Q99715 3063 aa8.5□□□□□ -1.05
SSU72-202ENST00000359060 H7C1H1 209 aa8.5□□□□□ -1.05
SSU72-202ENST00000359060 KLHL30-AS1Q8NEE0 82 aa8.5□□□□□ -1.05
SSU72-202ENST00000359060 FN1P02751 2386 aaKnown RBP8.5□□□□□ -1.05
SSU72-202ENST00000359060 SCGB1C2P0DMR2 95 aa8.5□□□□□ -1.05
SSU72-202ENST00000359060 PRR9Q5T870 116 aa8.5□□□□□ -1.05
SSU72-202ENST00000359060 RNF185Q96GF1 192 aa8.5□□□□□ -1.05
SSU72-202ENST00000359060 KNCNA6PVL3 124 aa8.5□□□□□ -1.05
SSU72-202ENST00000359060 K7ERU9 68 aa8.5□□□□□ -1.05
SSU72-202ENST00000359060 HOXD3P31249 432 aaPredicted RBP8.5□□□□□ -1.05
SSU72-202ENST00000359060 GAGE1Q13065 139 aa8.5□□□□□ -1.05
SSU72-202ENST00000359060 PIFOQ8TCI5 191 aa8.5□□□□□ -1.05
SSU72-202ENST00000359060 CHAC1Q9BUX1 264 aa8.5□□□□□ -1.05
SSU72-202ENST00000359060 VPREB3Q9UKI3 123 aa8.5□□□□□ -1.05
SSU72-202ENST00000359060 LOC107984156A0A0G2JMH3 177 aa8.49□□□□□ -1.05
SSU72-202ENST00000359060 CCL25O15444 150 aa8.49□□□□□ -1.05
SSU72-202ENST00000359060 ARL17AQ8IVW1 177 aa8.49□□□□□ -1.05
SSU72-202ENST00000359060 PEMTQ9UBM1 199 aa8.49□□□□□ -1.05
SSU72-202ENST00000359060 Q1RN00 199 aa8.49□□□□□ -1.05
SSU72-202ENST00000359060 JPT2Q9H910 190 aa8.49□□□□□ -1.05
SSU72-202ENST00000359060 TNFRSF18Q9Y5U5 241 aa8.49□□□□□ -1.05
SSU72-202ENST00000359060 RELNP78509 3460 aa8.49□□□□□ -1.05
SSU72-202ENST00000359060 ZNF815PA8K554 130 aa8.49□□□□□ -1.05
SSU72-202ENST00000359060 PLNP26678 52 aa8.49□□□□□ -1.05
SSU72-202ENST00000359060 TP53TG1Q9Y2A0 90 aa8.49□□□□□ -1.05
SSU72-202ENST00000359060 VCYO14598 125 aa8.48□□□□□ -1.05
SSU72-202ENST00000359060 CDKN1BP46527 198 aa8.48□□□□□ -1.05
SSU72-202ENST00000359060 IGHV3-64A0A075B6Q5 118 aa8.48□□□□□ -1.05
SSU72-202ENST00000359060 SDHAF1A6NFY7 115 aa8.48□□□□□ -1.05
SSU72-202ENST00000359060 ATP6V0BQ99437 205 aa8.48□□□□□ -1.05
SSU72-202ENST00000359060 AGRNO00468 2067 aa8.48□□□□□ -1.05
SSU72-202ENST00000359060 APOMO95445 188 aa8.48□□□□□ -1.05
SSU72-202ENST00000359060 LGALS3P17931 250 aaKnown RBP8.48□□□□□ -1.05
SSU72-202ENST00000359060 EDN2P20800 178 aa8.48□□□□□ -1.05
SSU72-202ENST00000359060 DEFB125Q8N687 156 aa8.48□□□□□ -1.05
SSU72-202ENST00000359060 ZFAND2AQ8N6M9 145 aa8.48□□□□□ -1.05
SSU72-202ENST00000359060 IGHV4OR15-8A0A075B7B6 117 aa8.47□□□□□ -1.05
SSU72-202ENST00000359060 A0A087WW49 117 aa8.47□□□□□ -1.05
SSU72-202ENST00000359060 H7C2G1 150 aa8.47□□□□□ -1.05
SSU72-202ENST00000359060 J3QLI3 93 aa8.47□□□□□ -1.05
SSU72-202ENST00000359060 SLURP1P55000 103 aa8.47□□□□□ -1.05
SSU72-202ENST00000359060 SRSF2Q01130 221 aaKnown RBP8.47□□□□□ -1.05
SSU72-202ENST00000359060 YAE1D1Q9NRH1 226 aa8.47□□□□□ -1.05
SSU72-202ENST00000359060 U3KQK5 164 aa8.47□□□□□ -1.05
SSU72-202ENST00000359060 IGHV1OR15-1A0A075B7D0 117 aa8.47□□□□□ -1.05
SSU72-202ENST00000359060 ODF1Q14990 250 aa8.47□□□□□ -1.05
SSU72-202ENST00000359060 TRGV11A0A075B6L2 103 aa8.47□□□□□ -1.05
SSU72-202ENST00000359060 PRSS2P07478 247 aa8.47□□□□□ -1.05
SSU72-202ENST00000359060 F8VRH5 84 aa8.46□□□□□ -1.05
SSU72-202ENST00000359060 K7EMI3 77 aa8.46□□□□□ -1.05
SSU72-202ENST00000359060 ELANEP08246 267 aa8.46□□□□□ -1.05
SSU72-202ENST00000359060 SAMD5Q5TGI4 173 aa8.46□□□□□ -1.05
SSU72-202ENST00000359060 FLNCQ14315 2725 aa8.46□□□□□ -1.05
SSU72-202ENST00000359060 LGALS1P09382 135 aaKnown RBP8.46□□□□□ -1.06
SSU72-202ENST00000359060 U3KQE9 123 aa8.46□□□□□ -1.06
SSU72-202ENST00000359060 JMJD1CQ15652 2540 aa8.46□□□□□ -1.06
SSU72-202ENST00000359060 TAX1BP3O14907 124 aa8.46□□□□□ -1.06
SSU72-202ENST00000359060 HIST2H2BDQ6DRA6 164 aa8.46□□□□□ -1.06
SSU72-202ENST00000359060 GPHB5Q86YW7 130 aa8.46□□□□□ -1.06
SSU72-202ENST00000359060 UBE2E2Q96LR5 201 aa8.46□□□□□ -1.06
SSU72-202ENST00000359060 VCX2Q9H322 139 aa8.46□□□□□ -1.06
SSU72-202ENST00000359060 A0A087WX48 190 aa8.45□□□□□ -1.06
SSU72-202ENST00000359060 TMEM238LA0A1B0GVL6 79 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms