RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 KLF5Q13887 457 aaPredicted RBP8.32□□□□□ -1.08
SVIP-201ENST00000354193 MAP1LC3CQ9BXW4 147 aa8.32□□□□□ -1.08
SVIP-201ENST00000354193 NDUFS6O75380 124 aaKnown RBP8.32□□□□□ -1.08
SVIP-201ENST00000354193 ZFAND2AQ8N6M9 145 aa8.32□□□□□ -1.08
SVIP-201ENST00000354193 C3orf56Q8N813 242 aa8.32□□□□□ -1.08
SVIP-201ENST00000354193 AP1S3Q96PC3 154 aa8.32□□□□□ -1.08
SVIP-201ENST00000354193 LINC00173Q6ZV60 143 aa8.31□□□□□ -1.08
SVIP-201ENST00000354193 Q6ZWC4 215 aa8.31□□□□□ -1.08
SVIP-201ENST00000354193 GSN-AS1Q9NRJ2 163 aa8.31□□□□□ -1.08
SVIP-201ENST00000354193 MUC4Q99102 2169 aa8.31□□□□□ -1.08
SVIP-201ENST00000354193 A0A0J9YX75 114 aa8.31□□□□□ -1.08
SVIP-201ENST00000354193 GAS8-AS1O95177 125 aa8.31□□□□□ -1.08
SVIP-201ENST00000354193 RNASE1P07998 156 aaKnown RBP8.31□□□□□ -1.08
SVIP-201ENST00000354193 ATP6V0BQ99437 205 aa8.31□□□□□ -1.08
SVIP-201ENST00000354193 C3orf79P0CE67 100 aa8.31□□□□□ -1.08
SVIP-201ENST00000354193 DEFB114Q30KQ6 69 aa8.31□□□□□ -1.08
SVIP-201ENST00000354193 C14orf144Q96I85 54 aa8.31□□□□□ -1.08
SVIP-201ENST00000354193 TMEM89A2RUT3 159 aa8.31□□□□□ -1.08
SVIP-201ENST00000354193 SAMD13Q5VXD3 122 aa8.31□□□□□ -1.08
SVIP-201ENST00000354193 Q8N1Y9 231 aa8.31□□□□□ -1.08
SVIP-201ENST00000354193 RBAKDNA6NC62 111 aa8.3□□□□□ -1.08
SVIP-201ENST00000354193 FAM231BA6NCW3 169 aa8.3□□□□□ -1.08
SVIP-201ENST00000354193 FCER1GP30273 86 aa8.3□□□□□ -1.08
SVIP-201ENST00000354193 KRTAP1-1Q07627 177 aa8.3□□□□□ -1.08
SVIP-201ENST00000354193 OR10J3Q5JRS4 329 aa8.3□□□□□ -1.08
SVIP-201ENST00000354193 SYT8Q8NBV8 401 aa8.3□□□□□ -1.08
SVIP-201ENST00000354193 PDZD2O15018 2839 aa8.3□□□□□ -1.08
SVIP-201ENST00000354193 TRGV1A0A0A0MS02 117 aa8.3□□□□□ -1.08
SVIP-201ENST00000354193 ZMAT5Q9UDW3 170 aaKnown RBP8.3□□□□□ -1.08
SVIP-201ENST00000354193 IGHV1OR15-1A0A075B7D0 117 aa8.3□□□□□ -1.08
SVIP-201ENST00000354193 TNFRSF6BO95407 300 aa8.3□□□□□ -1.08
SVIP-201ENST00000354193 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.3□□□□□ -1.08
SVIP-201ENST00000354193 JOSD1Q15040 202 aaPredicted RBP8.29□□□□□ -1.08
SVIP-201ENST00000354193 RASL11AQ6T310 242 aa8.29□□□□□ -1.08
SVIP-201ENST00000354193 RRN3P1Q2M238 152 aa8.29□□□□□ -1.08
SVIP-201ENST00000354193 MRPL53Q96EL3 112 aaKnown RBP8.29□□□□□ -1.08
SVIP-201ENST00000354193 MAP6D1Q9H9H5 199 aa8.29□□□□□ -1.08
SVIP-201ENST00000354193 TRGV2A0A075B6R0 118 aa8.29□□□□□ -1.08
SVIP-201ENST00000354193 LINC00587B1AMM8 73 aa8.29□□□□□ -1.08
SVIP-201ENST00000354193 TDRG1Q3Y452 100 aa8.29□□□□□ -1.08
SVIP-201ENST00000354193 FOXI2Q6ZQN5 318 aa8.29□□□□□ -1.08
SVIP-201ENST00000354193 RPL39LQ96EH5 51 aaKnown RBP8.29□□□□□ -1.08
SVIP-201ENST00000354193 MRPL16Q9NX20 251 aaKnown RBP8.29□□□□□ -1.08
SVIP-201ENST00000354193 A0A1B0GW15 77 aa8.28□□□□□ -1.08
SVIP-201ENST00000354193 Q0VG73 95 aa8.28□□□□□ -1.08
SVIP-201ENST00000354193 TMEM70Q9BUB7 260 aa8.28□□□□□ -1.08
SVIP-201ENST00000354193 SIGLEC8Q9NYZ4 499 aa8.28□□□□□ -1.08
SVIP-201ENST00000354193 A0A1B0GXF2 115 aa8.28□□□□□ -1.08
SVIP-201ENST00000354193 NPIPB6E9PJ23 425 aa8.28□□□□□ -1.08
SVIP-201ENST00000354193 HTN3P15516 51 aa8.28□□□□□ -1.08
SVIP-201ENST00000354193 HSPB8Q9UJY1 196 aa8.28□□□□□ -1.08
SVIP-201ENST00000354193 LINC01559Q495D7 138 aa8.28□□□□□ -1.08
SVIP-201ENST00000354193 GTSCR1Q86UQ5 136 aa8.28□□□□□ -1.08
SVIP-201ENST00000354193 DEFB130BP0DP73 79 aa8.27□□□□□ -1.09
SVIP-201ENST00000354193 DEFB130AP0DP74 79 aa8.27□□□□□ -1.09
SVIP-201ENST00000354193 SPATA45Q537H7 98 aa8.27□□□□□ -1.09
SVIP-201ENST00000354193 Q6ZN92 141 aa8.27□□□□□ -1.09
SVIP-201ENST00000354193 SPAG8Q99932 426 aaPredicted RBP8.27□□□□□ -1.09
SVIP-201ENST00000354193 DEFB125Q8N687 156 aa8.27□□□□□ -1.09
SVIP-201ENST00000354193 OR2K2Q8NGT1 345 aa8.27□□□□□ -1.09
SVIP-201ENST00000354193 MYOZ3Q8TDC0 251 aa8.27□□□□□ -1.09
SVIP-201ENST00000354193 PHLDA1Q8WV24 401 aaPredicted RBP8.27□□□□□ -1.09
SVIP-201ENST00000354193 TMEM191AQ9H0A3 160 aa8.27□□□□□ -1.09
SVIP-201ENST00000354193 DPH3P1Q9H4G8 78 aa8.27□□□□□ -1.09
SVIP-201ENST00000354193 CACNG7P62955 275 aa8.27□□□□□ -1.09
SVIP-201ENST00000354193 MAJINQ3KP22 176 aa8.27□□□□□ -1.09
SVIP-201ENST00000354193 IGHV1-24A0A0C4DH33 117 aa8.26□□□□□ -1.09
SVIP-201ENST00000354193 INSP01308 110 aa8.26□□□□□ -1.09
SVIP-201ENST00000354193 ADAMTSL5Q6ZMM2 481 aa8.26□□□□□ -1.09
SVIP-201ENST00000354193 LGALS9O00182 355 aa8.26□□□□□ -1.09
SVIP-201ENST00000354193 DEFB4AO15263 64 aa8.26□□□□□ -1.09
SVIP-201ENST00000354193 NMUP48645 174 aa8.26□□□□□ -1.09
SVIP-201ENST00000354193 LINC00482Q8N8I6 264 aa8.26□□□□□ -1.09
SVIP-201ENST00000354193 TMEM158Q8WZ71 300 aa8.26□□□□□ -1.09
SVIP-201ENST00000354193 ZNF469Q96JG9 3925 aaPredicted RBP8.26□□□□□ -1.09
SVIP-201ENST00000354193 IGKV3OR2-268A0A0C4DH90 116 aa8.26□□□□□ -1.09
SVIP-201ENST00000354193 H3BMM0 161 aa8.26□□□□□ -1.09
SVIP-201ENST00000354193 IGHV3-38A0A0C4DH36 116 aa8.25□□□□□ -1.09
SVIP-201ENST00000354193 hDV102S1A0JD36 115 aa8.25□□□□□ -1.09
SVIP-201ENST00000354193 SOCS3O14543 225 aa8.25□□□□□ -1.09
SVIP-201ENST00000354193 CSTL1Q9H114 145 aa8.25□□□□□ -1.09
SVIP-201ENST00000354193 TMEM160Q9NX00 188 aa8.25□□□□□ -1.09
SVIP-201ENST00000354193 LENEPQ9Y5L5 61 aa8.25□□□□□ -1.09
SVIP-201ENST00000354193 IGLC6P0CF74 106 aa8.25□□□□□ -1.09
SVIP-201ENST00000354193 ZNF664Q8N3J9 261 aa8.25□□□□□ -1.09
SVIP-201ENST00000354193 TRGV11A0A075B6L2 103 aa8.24□□□□□ -1.09
SVIP-201ENST00000354193 TRBV6-1A0A0K0K1D8 114 aa8.24□□□□□ -1.09
SVIP-201ENST00000354193 DGAT2L7PQ6IED9 249 aa8.24□□□□□ -1.09
SVIP-201ENST00000354193 KIR2DL4Q99706 377 aa8.24□□□□□ -1.09
SVIP-201ENST00000354193 TENM1Q9UKZ4 2725 aa8.24□□□□□ -1.09
SVIP-201ENST00000354193 HBDP02042 147 aa8.24□□□□□ -1.09
SVIP-201ENST00000354193 PPBPP02775 128 aa8.24□□□□□ -1.09
SVIP-201ENST00000354193 LINC00310P59036 64 aa8.24□□□□□ -1.09
SVIP-201ENST00000354193 COA6Q5JTJ3 125 aaKnown RBP8.24□□□□□ -1.09
SVIP-201ENST00000354193 GAGE12BA1L429 117 aa8.24□□□□□ -1.09
SVIP-201ENST00000354193 GAGE7O76087 117 aa8.24□□□□□ -1.09
SVIP-201ENST00000354193 GAGE12FP0CL80 117 aa8.24□□□□□ -1.09
SVIP-201ENST00000354193 GAGE12GP0CL81 117 aa8.24□□□□□ -1.09
SVIP-201ENST00000354193 GAGE12IP0CL82 117 aa8.24□□□□□ -1.09
SVIP-201ENST00000354193 CTRLP40313 264 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms