RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 C16orf54Q6UWD8 224 aa9.97□□□□□ -0.81
DNMT1-201ENST00000340748 VWC2LB2RUY7 222 aa9.97□□□□□ -0.81
DNMT1-201ENST00000340748 F6UB75 175 aa9.97□□□□□ -0.81
DNMT1-201ENST00000340748 H3BMM0 161 aa9.97□□□□□ -0.81
DNMT1-201ENST00000340748 INAFM2P0DMQ5 153 aa9.97□□□□□ -0.81
DNMT1-201ENST00000340748 Q8N9W7 124 aa9.97□□□□□ -0.81
DNMT1-201ENST00000340748 UBE2WQ96B02 151 aa9.97□□□□□ -0.81
DNMT1-201ENST00000340748 CGB3P0DN86 165 aa9.97□□□□□ -0.81
DNMT1-201ENST00000340748 PIFOQ8TCI5 191 aa9.97□□□□□ -0.81
DNMT1-201ENST00000340748 TEX22C9J3V5 150 aa9.96□□□□□ -0.81
DNMT1-201ENST00000340748 IGLV1-47P01700 117 aa9.96□□□□□ -0.81
DNMT1-201ENST00000340748 HIST1H4AP62805 103 aaKnown RBP9.96□□□□□ -0.81
DNMT1-201ENST00000340748 FAM167A-AS1Q96KT0 104 aa9.96□□□□□ -0.81
DNMT1-201ENST00000340748 C5orf56Q8N8D9 126 aa9.96□□□□□ -0.81
DNMT1-201ENST00000340748 DKK2Q9UBU2 259 aa9.96□□□□□ -0.81
DNMT1-201ENST00000340748 CEP192Q8TEP8 1941 aa9.96□□□□□ -0.81
DNMT1-201ENST00000340748 ABCA1O95477 2261 aa9.96□□□□□ -0.81
DNMT1-201ENST00000340748 GAGE2AQ6NT46 116 aa9.96□□□□□ -0.81
DNMT1-201ENST00000340748 PRO1854Q9UHT4 67 aa9.96□□□□□ -0.81
DNMT1-201ENST00000340748 NDUFA11Q86Y39 141 aa9.96□□□□□ -0.82
DNMT1-201ENST00000340748 C11orf1Q9H5F2 150 aa9.96□□□□□ -0.82
DNMT1-201ENST00000340748 BUB3O43684 328 aa9.95□□□□□ -0.82
DNMT1-201ENST00000340748 LMO4P61968 165 aa9.95□□□□□ -0.82
DNMT1-201ENST00000340748 MORN5Q5VZ52 161 aa9.95□□□□□ -0.82
DNMT1-201ENST00000340748 SPAG8Q99932 426 aaPredicted RBP9.95□□□□□ -0.82
DNMT1-201ENST00000340748 A0A1W2PPM0 123 aa9.95□□□□□ -0.82
DNMT1-201ENST00000340748 AJUBAQ96IF1 538 aa9.95□□□□□ -0.82
DNMT1-201ENST00000340748 TRBV6-1A0A0K0K1D8 114 aa9.94□□□□□ -0.82
DNMT1-201ENST00000340748 PRSS29PA6NIE9 313 aa9.94□□□□□ -0.82
DNMT1-201ENST00000340748 PPDPFLQ8WWR9 84 aa9.94□□□□□ -0.82
DNMT1-201ENST00000340748 GTSF1LQ9H1H1 148 aa9.94□□□□□ -0.82
DNMT1-201ENST00000340748 PFN2P35080 140 aa9.94□□□□□ -0.82
DNMT1-201ENST00000340748 SPG11Q96JI7 2443 aa9.94□□□□□ -0.82
DNMT1-201ENST00000340748 TRAV13-2A0A0B4J235 113 aa9.94□□□□□ -0.82
DNMT1-201ENST00000340748 SOCS3O14543 225 aa9.94□□□□□ -0.82
DNMT1-201ENST00000340748 U3KQE9 123 aa9.94□□□□□ -0.82
DNMT1-201ENST00000340748 SPINK8P0C7L1 97 aa9.94□□□□□ -0.82
DNMT1-201ENST00000340748 ZNF48Q96MX3 618 aaPredicted RBP9.94□□□□□ -0.82
DNMT1-201ENST00000340748 MED13Q9UHV7 2174 aa9.94□□□□□ -0.82
DNMT1-201ENST00000340748 TMEM89A2RUT3 159 aa9.93□□□□□ -0.82
DNMT1-201ENST00000340748 FGF6P10767 208 aa9.93□□□□□ -0.82
DNMT1-201ENST00000340748 Q8N7P7 452 aa9.93□□□□□ -0.82
DNMT1-201ENST00000340748 KIR2DL5BA0A0G2JN68 375 aa9.93□□□□□ -0.82
DNMT1-201ENST00000340748 KIR2DL5BA0A0G2JPC4 375 aa9.93□□□□□ -0.82
DNMT1-201ENST00000340748 TNFRSF13BO14836 293 aaPredicted RBP9.93□□□□□ -0.82
DNMT1-201ENST00000340748 KIR2DL5AQ8N109 375 aa9.93□□□□□ -0.82
DNMT1-201ENST00000340748 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.93□□□□□ -0.82
DNMT1-201ENST00000340748 SPANXA1Q9NS26 97 aa9.93□□□□□ -0.82
DNMT1-201ENST00000340748 K7EMT4 169 aa9.93□□□□□ -0.82
DNMT1-201ENST00000340748 KIAA1549LQ6ZVL6 1849 aa9.93□□□□□ -0.82
DNMT1-201ENST00000340748 CADP27708 2225 aa9.93□□□□□ -0.82
DNMT1-201ENST00000340748 RMI2Q96E14 147 aa9.93□□□□□ -0.82
DNMT1-201ENST00000340748 SIRPDQ9H106 197 aa9.93□□□□□ -0.82
DNMT1-201ENST00000340748 MBD6Q96DN6 1003 aa9.92□□□□□ -0.82
DNMT1-201ENST00000340748 Q6YL49 198 aa9.92□□□□□ -0.82
DNMT1-201ENST00000340748 C9orf47Q6ZRZ4 202 aa9.92□□□□□ -0.82
DNMT1-201ENST00000340748 CDSNQ15517 529 aa9.92□□□□□ -0.82
DNMT1-201ENST00000340748 KMT2EQ8IZD2 1858 aa9.92□□□□□ -0.82
DNMT1-201ENST00000340748 CDK2AP2O75956 126 aa9.92□□□□□ -0.82
DNMT1-201ENST00000340748 NOP10Q9NPE3 64 aaKnown RBP9.92□□□□□ -0.82
DNMT1-201ENST00000340748 CRLF1O75462 422 aa9.91□□□□□ -0.82
DNMT1-201ENST00000340748 P0C879 139 aa9.91□□□□□ -0.82
DNMT1-201ENST00000340748 LINC00574Q9H8X3 128 aa9.91□□□□□ -0.82
DNMT1-201ENST00000340748 MSMPQ1L6U9 139 aa9.91□□□□□ -0.82
DNMT1-201ENST00000340748 UTF1Q5T230 341 aa9.91□□□□□ -0.82
DNMT1-201ENST00000340748 SUMO4Q6EEV6 95 aa9.91□□□□□ -0.82
DNMT1-201ENST00000340748 SPANXDQ9BXN6 97 aa9.91□□□□□ -0.82
DNMT1-201ENST00000340748 MED14OSP0DP75 135 aa9.91□□□□□ -0.82
DNMT1-201ENST00000340748 INSL3P51460 131 aa9.91□□□□□ -0.82
DNMT1-201ENST00000340748 MAJINQ3KP22 176 aa9.91□□□□□ -0.82
DNMT1-201ENST00000340748 NKAPP1Q8N9T2 125 aa9.91□□□□□ -0.82
DNMT1-201ENST00000340748 K7EP13 123 aa9.91□□□□□ -0.82
DNMT1-201ENST00000340748 C22orf34Q6ZV56 151 aa9.9□□□□□ -0.82
DNMT1-201ENST00000340748 MED13LQ71F56 2210 aa9.9□□□□□ -0.82
DNMT1-201ENST00000340748 C12orf74Q32Q52 190 aa9.9□□□□□ -0.82
DNMT1-201ENST00000340748 LINC01545Q5VT33 79 aa9.9□□□□□ -0.82
DNMT1-201ENST00000340748 C4orf3Q8WVX3 66 aa9.9□□□□□ -0.82
DNMT1-201ENST00000340748 C16orf74Q96GX8 76 aa9.9□□□□□ -0.82
DNMT1-201ENST00000340748 IGKV1OR2-108A0A075B7D4 117 aa9.9□□□□□ -0.83
DNMT1-201ENST00000340748 CGB7P0DN87 165 aa9.89□□□□□ -0.83
DNMT1-201ENST00000340748 PRSS47A8MTI9 375 aa9.89□□□□□ -0.83
DNMT1-201ENST00000340748 GATA1P15976 413 aaPredicted RBP9.89□□□□□ -0.83
DNMT1-201ENST00000340748 HERV-K104P63124 156 aa9.89□□□□□ -0.83
DNMT1-201ENST00000340748 TNRC6AQ8NDV7 1962 aaKnown RBP9.89□□□□□ -0.83
DNMT1-201ENST00000340748 IGHV4OR15-8A0A075B7B6 117 aa9.89□□□□□ -0.83
DNMT1-201ENST00000340748 A0A087WW49 117 aa9.89□□□□□ -0.83
DNMT1-201ENST00000340748 GPHB5Q86YW7 130 aa9.89□□□□□ -0.83
DNMT1-201ENST00000340748 GTSF1Q8WW33 167 aa9.89□□□□□ -0.83
DNMT1-201ENST00000340748 NCKAP5O14513 1909 aa9.89□□□□□ -0.83
DNMT1-201ENST00000340748 DENND4AQ7Z401 1863 aa9.89□□□□□ -0.83
DNMT1-201ENST00000340748 ANGP03950 147 aaKnown RBP9.89□□□□□ -0.83
DNMT1-201ENST00000340748 NPSP0C0P6 89 aa9.89□□□□□ -0.83
DNMT1-201ENST00000340748 DOCK11Q5JSL3 2073 aa9.88□□□□□ -0.83
DNMT1-201ENST00000340748 IGHG2P01859 326 aa9.88□□□□□ -0.83
DNMT1-201ENST00000340748 MALRD1Q5VYJ5 2156 aa9.88□□□□□ -0.83
DNMT1-201ENST00000340748 E7EUB6 86 aa9.88□□□□□ -0.83
DNMT1-201ENST00000340748 RPL39LQ96EH5 51 aaKnown RBP9.88□□□□□ -0.83
DNMT1-201ENST00000340748 ATRXP46100 2492 aa9.88□□□□□ -0.83
DNMT1-201ENST00000340748 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.88□□□□□ -0.83
DNMT1-201ENST00000340748 IGKV2-29A2NJV5 120 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms