RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 PROP1O75360 226 aa9.78□□□□□ -0.84
LIN54-201ENST00000340417 HLA-DRB4P13762 266 aa9.78□□□□□ -0.84
LIN54-201ENST00000340417 Q6ZS46 218 aa9.78□□□□□ -0.84
LIN54-201ENST00000340417 NKAPP1Q8N9T2 125 aa9.78□□□□□ -0.84
LIN54-201ENST00000340417 HLA-DRB4X5D2U9 266 aa9.78□□□□□ -0.84
LIN54-201ENST00000340417 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.78□□□□□ -0.84
LIN54-201ENST00000340417 GHRHP01286 108 aa9.78□□□□□ -0.84
LIN54-201ENST00000340417 C20orf144Q9BQM9 153 aa9.78□□□□□ -0.84
LIN54-201ENST00000340417 CHCHD1Q96BP2 118 aaKnown RBP9.78□□□□□ -0.84
LIN54-201ENST00000340417 ZNF25P17030 456 aaPredicted RBP9.77□□□□□ -0.84
LIN54-201ENST00000340417 DEFB1P60022 68 aa9.77□□□□□ -0.84
LIN54-201ENST00000340417 LAMTOR2Q9Y2Q5 125 aa9.77□□□□□ -0.84
LIN54-201ENST00000340417 TRAV26-2A0A0B4J265 109 aa9.77□□□□□ -0.85
LIN54-201ENST00000340417 TMEM263Q8WUH6 116 aaKnown RBP9.77□□□□□ -0.85
LIN54-201ENST00000340417 A0A0J9YX75 114 aa9.77□□□□□ -0.85
LIN54-201ENST00000340417 WDR87Q6ZQQ6 2873 aa9.77□□□□□ -0.85
LIN54-201ENST00000340417 PTPRBP23467 1997 aa9.77□□□□□ -0.85
LIN54-201ENST00000340417 TP53TG1Q9Y2A0 90 aa9.76□□□□□ -0.85
LIN54-201ENST00000340417 IGKCP01834 107 aa9.76□□□□□ -0.85
LIN54-201ENST00000340417 TRAV2A0A0B4J234 112 aa9.76□□□□□ -0.85
LIN54-201ENST00000340417 SMIM9A6NGZ8 99 aa9.76□□□□□ -0.85
LIN54-201ENST00000340417 PMCHL2Q9BQD1 86 aa9.76□□□□□ -0.85
LIN54-201ENST00000340417 LY6G6CO95867 125 aa9.75□□□□□ -0.85
LIN54-201ENST00000340417 PLNP26678 52 aa9.75□□□□□ -0.85
LIN54-201ENST00000340417 PLP1P60201 277 aa9.75□□□□□ -0.85
LIN54-201ENST00000340417 PLEKHB2Q96CS7 222 aa9.75□□□□□ -0.85
LIN54-201ENST00000340417 PRIMA1Q86XR5 153 aa9.75□□□□□ -0.85
LIN54-201ENST00000340417 Q8N1Y9 231 aa9.75□□□□□ -0.85
LIN54-201ENST00000340417 ZNF747Q9BV97 191 aa9.75□□□□□ -0.85
LIN54-201ENST00000340417 SERF1AO75920 110 aa9.75□□□□□ -0.85
LIN54-201ENST00000340417 IFITM2Q01629 132 aa9.75□□□□□ -0.85
LIN54-201ENST00000340417 C16orf95Q9H693 158 aa9.75□□□□□ -0.85
LIN54-201ENST00000340417 MRPL36Q9P0J6 103 aaKnown RBP9.75□□□□□ -0.85
LIN54-201ENST00000340417 CT83Q5H943 113 aa9.74□□□□□ -0.85
LIN54-201ENST00000340417 FAM222AQ5U5X8 452 aa9.74□□□□□ -0.85
LIN54-201ENST00000340417 WNK1Q9H4A3 2382 aa9.74□□□□□ -0.85
LIN54-201ENST00000340417 FAM231BA6NCW3 169 aa9.74□□□□□ -0.85
LIN54-201ENST00000340417 UBE2BP63146 152 aa9.74□□□□□ -0.85
LIN54-201ENST00000340417 ZNF726P1Q15940 193 aa9.74□□□□□ -0.85
LIN54-201ENST00000340417 LINC01559Q495D7 138 aa9.74□□□□□ -0.85
LIN54-201ENST00000340417 PATE2Q6UY27 113 aa9.74□□□□□ -0.85
LIN54-201ENST00000340417 CENPFP49454 3210 aa9.74□□□□□ -0.85
LIN54-201ENST00000340417 XCL1P47992 114 aa9.74□□□□□ -0.85
LIN54-201ENST00000340417 C1orf229Q6ZS94 237 aaPredicted RBP9.74□□□□□ -0.85
LIN54-201ENST00000340417 PRAC2D3DTV9 90 aa9.74□□□□□ -0.85
LIN54-201ENST00000340417 SMIM13P0DJ93 91 aa9.74□□□□□ -0.85
LIN54-201ENST00000340417 MIFP14174 115 aa9.74□□□□□ -0.85
LIN54-201ENST00000340417 PRSS29PA6NIE9 313 aa9.74□□□□□ -0.85
LIN54-201ENST00000340417 Q6ZWC4 215 aa9.74□□□□□ -0.85
LIN54-201ENST00000340417 ZNF815PA8K554 130 aa9.73□□□□□ -0.85
LIN54-201ENST00000340417 TYMSP04818 313 aa9.73□□□□□ -0.85
LIN54-201ENST00000340417 NPC2P61916 151 aa9.73□□□□□ -0.85
LIN54-201ENST00000340417 AMTNQ6UX39 209 aa9.73□□□□□ -0.85
LIN54-201ENST00000340417 CRYGBP07316 175 aa9.73□□□□□ -0.85
LIN54-201ENST00000340417 Q8N6K4 173 aa9.73□□□□□ -0.85
LIN54-201ENST00000340417 TIMM21Q9BVV7 248 aa9.73□□□□□ -0.85
LIN54-201ENST00000340417 PRO0255Q9UI72 69 aa9.73□□□□□ -0.85
LIN54-201ENST00000340417 JMJD1CQ15652 2540 aa9.73□□□□□ -0.85
LIN54-201ENST00000340417 EGR2P11161 476 aaPredicted RBP9.73□□□□□ -0.85
LIN54-201ENST00000340417 TRAV10A0A0B4J240 114 aa9.73□□□□□ -0.85
LIN54-201ENST00000340417 FAM104BQ5XKR9 115 aa9.73□□□□□ -0.85
LIN54-201ENST00000340417 C9orf47Q6ZRZ4 202 aa9.73□□□□□ -0.85
LIN54-201ENST00000340417 GTF2H5Q6ZYL4 71 aa9.73□□□□□ -0.85
LIN54-201ENST00000340417 LYRM9A8MSI8 78 aa9.72□□□□□ -0.85
LIN54-201ENST00000340417 CIDEAO60543 219 aa9.72□□□□□ -0.85
LIN54-201ENST00000340417 LTAP01374 205 aa9.72□□□□□ -0.85
LIN54-201ENST00000340417 TMEM170AQ8WVE7 144 aa9.72□□□□□ -0.85
LIN54-201ENST00000340417 ZFYVE26Q68DK2 2539 aa9.72□□□□□ -0.85
LIN54-201ENST00000340417 A0A087X0K7 114 aa9.72□□□□□ -0.85
LIN54-201ENST00000340417 A8MWP6 167 aa9.72□□□□□ -0.85
LIN54-201ENST00000340417 SNAI2O43623 268 aa9.72□□□□□ -0.85
LIN54-201ENST00000340417 MYMXA0A1B0GTQ4 84 aa9.72□□□□□ -0.85
LIN54-201ENST00000340417 K7EQG2 157 aa9.72□□□□□ -0.85
LIN54-201ENST00000340417 TRAV26-1A0A087WT03 109 aa9.71□□□□□ -0.85
LIN54-201ENST00000340417 DNAJC30Q96LL9 226 aa9.71□□□□□ -0.85
LIN54-201ENST00000340417 PGPEP1Q9NXJ5 209 aa9.71□□□□□ -0.85
LIN54-201ENST00000340417 MORN5Q5VZ52 161 aa9.71□□□□□ -0.86
LIN54-201ENST00000340417 F8WEM9 126 aa9.71□□□□□ -0.86
LIN54-201ENST00000340417 C2orf66Q6UXQ4 117 aa9.7□□□□□ -0.86
LIN54-201ENST00000340417 TMEM141Q96I45 108 aa9.7□□□□□ -0.86
LIN54-201ENST00000340417 IGLV10-54A0A075B6I4 117 aa9.7□□□□□ -0.86
LIN54-201ENST00000340417 DAZ2Q13117 558 aaKnown RBP9.7□□□□□ -0.86
LIN54-201ENST00000340417 DAZ4Q86SG3 579 aaKnown RBP9.7□□□□□ -0.86
LIN54-201ENST00000340417 DAZ3Q9NR90 486 aaKnown RBP9.7□□□□□ -0.86
LIN54-201ENST00000340417 ZNF124Q15973 351 aa9.7□□□□□ -0.86
LIN54-201ENST00000340417 IGLV1-40P01703 118 aa9.7□□□□□ -0.86
LIN54-201ENST00000340417 IGHV4-30-4P0DP06 118 aa9.7□□□□□ -0.86
LIN54-201ENST00000340417 MRPL51Q4U2R6 128 aaKnown RBP9.7□□□□□ -0.86
LIN54-201ENST00000340417 EPG5Q9HCE0 2579 aa9.69□□□□□ -0.86
LIN54-201ENST00000340417 PFN2P35080 140 aa9.69□□□□□ -0.86
LIN54-201ENST00000340417 UQCR10Q9UDW1 63 aa9.69□□□□□ -0.86
LIN54-201ENST00000340417 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.69□□□□□ -0.86
LIN54-201ENST00000340417 IGKV2-29A2NJV5 120 aaPredicted RBP9.69□□□□□ -0.86
LIN54-201ENST00000340417 RPL18AQ02543 176 aaKnown RBP9.69□□□□□ -0.86
LIN54-201ENST00000340417 Q8N8P6 123 aa9.69□□□□□ -0.86
LIN54-201ENST00000340417 PET117Q6UWS5 81 aa9.69□□□□□ -0.86
LIN54-201ENST00000340417 RAI1Q7Z5J4 1906 aaPredicted RBP9.69□□□□□ -0.86
LIN54-201ENST00000340417 PKD1L2Q7Z442 2459 aa9.69□□□□□ -0.86
LIN54-201ENST00000340417 TNRC6BQ9UPQ9 1833 aaKnown RBP9.68□□□□□ -0.86
LIN54-201ENST00000340417 TMEM238C9JI98 176 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms