RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 DNHD1Q96M86 4753 aa11.33□□□□□ -0.6
TUBB4B-201ENST00000340384 H3BVH4 76 aa11.33□□□□□ -0.6
TUBB4B-201ENST00000340384 KRTAP21-3Q3LHN1 58 aa11.33□□□□□ -0.6
TUBB4B-201ENST00000340384 FAM159AQ6UWV7 190 aa11.33□□□□□ -0.6
TUBB4B-201ENST00000340384 OR10AG1Q8NH19 301 aa11.33□□□□□ -0.6
TUBB4B-201ENST00000340384 DYNLRB2Q8TF09 96 aa11.33□□□□□ -0.6
TUBB4B-201ENST00000340384 PRO1933Q9H354 126 aa11.33□□□□□ -0.6
TUBB4B-201ENST00000340384 MAP1LC3AQ9H492 121 aa11.33□□□□□ -0.6
TUBB4B-201ENST00000340384 C20orf202A1L168 122 aa11.32□□□□□ -0.6
TUBB4B-201ENST00000340384 CCL24O00175 119 aa11.32□□□□□ -0.6
TUBB4B-201ENST00000340384 DDTP30046 118 aa11.32□□□□□ -0.6
TUBB4B-201ENST00000340384 DEFB1P60022 68 aa11.32□□□□□ -0.6
TUBB4B-201ENST00000340384 ANXA2RQ3ZCQ2 193 aa11.32□□□□□ -0.6
TUBB4B-201ENST00000340384 SHISA2Q6UWI4 295 aa11.32□□□□□ -0.6
TUBB4B-201ENST00000340384 RNF185Q96GF1 192 aa11.32□□□□□ -0.6
TUBB4B-201ENST00000340384 TMEM70Q9BUB7 260 aa11.32□□□□□ -0.6
TUBB4B-201ENST00000340384 MSRB1Q9NZV6 116 aa11.32□□□□□ -0.6
TUBB4B-201ENST00000340384 PHLDA3Q9Y5J5 127 aa11.32□□□□□ -0.6
TUBB4B-201ENST00000340384 SELENOKQ9Y6D0 94 aa11.32□□□□□ -0.6
TUBB4B-201ENST00000340384 WNK1Q9H4A3 2382 aa11.32□□□□□ -0.6
TUBB4B-201ENST00000340384 C7orf71A4D174 169 aa11.31□□□□□ -0.6
TUBB4B-201ENST00000340384 CD33P20138 364 aa11.31□□□□□ -0.6
TUBB4B-201ENST00000340384 DEFA6Q01524 100 aa11.31□□□□□ -0.6
TUBB4B-201ENST00000340384 SIGLEC8Q9NYZ4 499 aa11.31□□□□□ -0.6
TUBB4B-201ENST00000340384 KIR2DL5BA0A0G2JN68 375 aa11.31□□□□□ -0.6
TUBB4B-201ENST00000340384 KIR2DL5BA0A0G2JPC4 375 aa11.31□□□□□ -0.6
TUBB4B-201ENST00000340384 KIR2DL5AQ8N109 375 aa11.31□□□□□ -0.6
TUBB4B-201ENST00000340384 DLX4Q92988 240 aaPredicted RBP11.31□□□□□ -0.6
TUBB4B-201ENST00000340384 MAP1LC3CQ9BXW4 147 aa11.31□□□□□ -0.6
TUBB4B-201ENST00000340384 IFI27P40305 119 aaPredicted RBP11.3□□□□□ -0.6
TUBB4B-201ENST00000340384 CDKN1BP46527 198 aa11.3□□□□□ -0.6
TUBB4B-201ENST00000340384 MRAP2Q96G30 205 aa11.3□□□□□ -0.6
TUBB4B-201ENST00000340384 NXT2Q9NPJ8 142 aaKnown RBP11.3□□□□□ -0.6
TUBB4B-201ENST00000340384 CMYA5Q8N3K9 4069 aa11.3□□□□□ -0.6
TUBB4B-201ENST00000340384 PKD1L1Q8TDX9 2849 aa11.3□□□□□ -0.6
TUBB4B-201ENST00000340384 TRAV25A0A0B4J276 109 aa11.29□□□□□ -0.6
TUBB4B-201ENST00000340384 ADAMTSL5Q6ZMM2 481 aa11.29□□□□□ -0.6
TUBB4B-201ENST00000340384 Q8N976 141 aa11.29□□□□□ -0.6
TUBB4B-201ENST00000340384 C20orf144Q9BQM9 153 aa11.29□□□□□ -0.6
TUBB4B-201ENST00000340384 SCRT2Q9NQ03 307 aa11.29□□□□□ -0.6
TUBB4B-201ENST00000340384 TIMM8BQ9Y5J9 83 aaPredicted RBP11.29□□□□□ -0.6
TUBB4B-201ENST00000340384 LOC389332A0A1B0GUA5 103 aa11.28□□□□□ -0.6
TUBB4B-201ENST00000340384 OR4C46A6NHA9 309 aa11.28□□□□□ -0.6
TUBB4B-201ENST00000340384 NPYP01303 97 aa11.28□□□□□ -0.6
TUBB4B-201ENST00000340384 Q6ZQT7 251 aa11.28□□□□□ -0.6
TUBB4B-201ENST00000340384 CRXO43186 299 aaPredicted RBP11.27□□□□□ -0.6
TUBB4B-201ENST00000340384 TNFRSF6BO95407 300 aa11.27□□□□□ -0.6
TUBB4B-201ENST00000340384 NCR2O95944 276 aa11.27□□□□□ -0.6
TUBB4B-201ENST00000340384 EVI2AP22794 236 aa11.27□□□□□ -0.6
TUBB4B-201ENST00000340384 TDRG1Q3Y452 100 aa11.27□□□□□ -0.6
TUBB4B-201ENST00000340384 PET117Q6UWS5 81 aa11.27□□□□□ -0.6
TUBB4B-201ENST00000340384 LINC00482Q8N8I6 264 aa11.27□□□□□ -0.6
TUBB4B-201ENST00000340384 AP1S3Q96PC3 154 aa11.27□□□□□ -0.6
TUBB4B-201ENST00000340384 DPH3P1Q9H4G8 78 aa11.27□□□□□ -0.6
TUBB4B-201ENST00000340384 TRAV12-3A0A0B4J271 114 aa11.27□□□□□ -0.61
TUBB4B-201ENST00000340384 SMKR1H3BMG3 65 aa11.27□□□□□ -0.61
TUBB4B-201ENST00000340384 SYS1-DBNDD2H3BUS1 97 aa11.27□□□□□ -0.61
TUBB4B-201ENST00000340384 M0R381 172 aa11.27□□□□□ -0.61
TUBB4B-201ENST00000340384 OR2K2Q8NGT1 345 aa11.27□□□□□ -0.61
TUBB4B-201ENST00000340384 SPAG8Q99932 426 aaPredicted RBP11.27□□□□□ -0.61
TUBB4B-201ENST00000340384 LINC01546A6NGU7 62 aa11.26□□□□□ -0.61
TUBB4B-201ENST00000340384 NXPH4O95158 308 aa11.26□□□□□ -0.61
TUBB4B-201ENST00000340384 PPP1R17O96001 155 aa11.26□□□□□ -0.61
TUBB4B-201ENST00000340384 HBDP02042 147 aa11.26□□□□□ -0.61
TUBB4B-201ENST00000340384 DEFB114Q30KQ6 69 aa11.26□□□□□ -0.61
TUBB4B-201ENST00000340384 NDUFAF3Q9BU61 184 aa11.26□□□□□ -0.61
TUBB4B-201ENST00000340384 PAM16Q9Y3D7 125 aa11.26□□□□□ -0.61
TUBB4B-201ENST00000340384 PRSS47A8MTI9 375 aa11.25□□□□□ -0.61
TUBB4B-201ENST00000340384 GNRH2O43555 120 aa11.25□□□□□ -0.61
TUBB4B-201ENST00000340384 CD7P09564 240 aa11.25□□□□□ -0.61
TUBB4B-201ENST00000340384 HLA-DRB4P13762 266 aa11.25□□□□□ -0.61
TUBB4B-201ENST00000340384 DEFB131AP59861 70 aa11.25□□□□□ -0.61
TUBB4B-201ENST00000340384 KIR3DS1Q14943 382 aa11.25□□□□□ -0.61
TUBB4B-201ENST00000340384 TMEM61Q8N0U2 210 aa11.25□□□□□ -0.61
TUBB4B-201ENST00000340384 DEFB125Q8N687 156 aa11.25□□□□□ -0.61
TUBB4B-201ENST00000340384 HLA-DRB4X5D2U9 266 aa11.25□□□□□ -0.61
TUBB4B-201ENST00000340384 A8MTW9 85 aa11.24□□□□□ -0.61
TUBB4B-201ENST00000340384 IGKV3-20P01619 116 aa11.24□□□□□ -0.61
TUBB4B-201ENST00000340384 SMIM17P0DL12 118 aa11.24□□□□□ -0.61
TUBB4B-201ENST00000340384 RNASE3P12724 160 aaKnown RBP11.24□□□□□ -0.61
TUBB4B-201ENST00000340384 SYT8Q8NBV8 401 aa11.24□□□□□ -0.61
TUBB4B-201ENST00000340384 TRGV11A0A075B6L2 103 aa11.24□□□□□ -0.61
TUBB4B-201ENST00000340384 IGHV1OR15-1A0A075B7D0 117 aa11.24□□□□□ -0.61
TUBB4B-201ENST00000340384 SPINK13Q1W4C9 94 aa11.24□□□□□ -0.61
TUBB4B-201ENST00000340384 SPATA45Q537H7 98 aa11.24□□□□□ -0.61
TUBB4B-201ENST00000340384 ZNF705AQ6ZN79 300 aaPredicted RBP11.24□□□□□ -0.61
TUBB4B-201ENST00000340384 Q8N8P6 123 aa11.24□□□□□ -0.61
TUBB4B-201ENST00000340384 TRAV9-2A0A087WT02 112 aa11.23□□□□□ -0.61
TUBB4B-201ENST00000340384 AMTNQ6UX39 209 aa11.23□□□□□ -0.61
TUBB4B-201ENST00000340384 SPATA12Q7Z6I5 190 aa11.23□□□□□ -0.61
TUBB4B-201ENST00000340384 WFDC9Q8NEX5 89 aa11.23□□□□□ -0.61
TUBB4B-201ENST00000340384 PF4P02776 101 aa11.22□□□□□ -0.61
TUBB4B-201ENST00000340384 CMC4P56277 68 aaPredicted RBP11.22□□□□□ -0.61
TUBB4B-201ENST00000340384 MIEN1Q9BRT3 115 aa11.22□□□□□ -0.61
TUBB4B-201ENST00000340384 MAP6D1Q9H9H5 199 aa11.22□□□□□ -0.61
TUBB4B-201ENST00000340384 H3BMM0 161 aa11.21□□□□□ -0.61
TUBB4B-201ENST00000340384 CD300EQ496F6 205 aaPredicted RBP11.21□□□□□ -0.61
TUBB4B-201ENST00000340384 NRACQ8N912 160 aa11.21□□□□□ -0.61
TUBB4B-201ENST00000340384 C20orf78Q9BR46 151 aa11.21□□□□□ -0.61
TUBB4B-201ENST00000340384 TRAV12-2A0A075B6T6 113 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms