RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 RHOHQ15669 191 aa7.11□□□□□ -1.27
FNDC3B-201ENST00000336824 PIFOQ8TCI5 191 aa7.11□□□□□ -1.27
FNDC3B-201ENST00000336824 MRAPQ8TCY5 172 aa7.11□□□□□ -1.27
FNDC3B-201ENST00000336824 HLA-DRB4P13762 266 aa7.11□□□□□ -1.27
FNDC3B-201ENST00000336824 DEFB114Q30KQ6 69 aa7.11□□□□□ -1.27
FNDC3B-201ENST00000336824 RAB37Q96AX2 223 aa7.11□□□□□ -1.27
FNDC3B-201ENST00000336824 HLA-DRB4X5D2U9 266 aa7.11□□□□□ -1.27
FNDC3B-201ENST00000336824 GSN-AS1Q9NRJ2 163 aa7.1□□□□□ -1.27
FNDC3B-201ENST00000336824 RPL13AP40429 203 aaKnown RBP7.1□□□□□ -1.27
FNDC3B-201ENST00000336824 ZFAND3Q9H8U3 227 aa7.1□□□□□ -1.27
FNDC3B-201ENST00000336824 MAP6D1Q9H9H5 199 aa7.1□□□□□ -1.27
FNDC3B-201ENST00000336824 A0A0J9YX75 114 aa7.1□□□□□ -1.27
FNDC3B-201ENST00000336824 SH2D6Q7Z4S9 175 aa7.1□□□□□ -1.27
FNDC3B-201ENST00000336824 TOMM7Q9P0U1 55 aa7.1□□□□□ -1.27
FNDC3B-201ENST00000336824 U3KQE9 123 aa7.1□□□□□ -1.27
FNDC3B-201ENST00000336824 SMR3AQ99954 134 aa7.1□□□□□ -1.27
FNDC3B-201ENST00000336824 BRI3O95415 125 aa7.09□□□□□ -1.27
FNDC3B-201ENST00000336824 DNLZQ5SXM8 178 aa7.09□□□□□ -1.27
FNDC3B-201ENST00000336824 CRXO43186 299 aaPredicted RBP7.09□□□□□ -1.27
FNDC3B-201ENST00000336824 TCTAP57738 103 aa7.09□□□□□ -1.27
FNDC3B-201ENST00000336824 K7EN84 100 aa7.09□□□□□ -1.27
FNDC3B-201ENST00000336824 TYMSP04818 313 aa7.09□□□□□ -1.27
FNDC3B-201ENST00000336824 SS18Q15532 418 aa7.09□□□□□ -1.27
FNDC3B-201ENST00000336824 VPS25Q9BRG1 176 aa7.09□□□□□ -1.27
FNDC3B-201ENST00000336824 MED14OSP0DP75 135 aa7.09□□□□□ -1.27
FNDC3B-201ENST00000336824 PLNP26678 52 aa7.09□□□□□ -1.27
FNDC3B-201ENST00000336824 TRAV9-2A0A087WT02 112 aa7.09□□□□□ -1.27
FNDC3B-201ENST00000336824 K7EMI3 77 aa7.09□□□□□ -1.27
FNDC3B-201ENST00000336824 PAX4O43316 350 aa7.09□□□□□ -1.27
FNDC3B-201ENST00000336824 C16orf95Q9H693 158 aa7.09□□□□□ -1.27
FNDC3B-201ENST00000336824 COX6CP09669 75 aa7.09□□□□□ -1.27
FNDC3B-201ENST00000336824 KLF5Q13887 457 aaPredicted RBP7.09□□□□□ -1.27
FNDC3B-201ENST00000336824 SMKR1H3BMG3 65 aa7.09□□□□□ -1.28
FNDC3B-201ENST00000336824 K7EQG2 157 aa7.09□□□□□ -1.28
FNDC3B-201ENST00000336824 IGKCP01834 107 aa7.09□□□□□ -1.28
FNDC3B-201ENST00000336824 MRPL51Q4U2R6 128 aaKnown RBP7.09□□□□□ -1.28
FNDC3B-201ENST00000336824 PHLDA1Q8WV24 401 aaPredicted RBP7.09□□□□□ -1.28
FNDC3B-201ENST00000336824 C20orf78Q9BR46 151 aa7.09□□□□□ -1.28
FNDC3B-201ENST00000336824 IGHV3-16A0A0C4DH30 117 aa7.08□□□□□ -1.28
FNDC3B-201ENST00000336824 GNRH2O43555 120 aa7.08□□□□□ -1.28
FNDC3B-201ENST00000336824 PRR31Q5SQ13 230 aa7.08□□□□□ -1.28
FNDC3B-201ENST00000336824 ATOH7Q8N100 152 aa7.08□□□□□ -1.28
FNDC3B-201ENST00000336824 LINC00469Q8N7U9 141 aa7.08□□□□□ -1.28
FNDC3B-201ENST00000336824 POLQO75417 2590 aa7.08□□□□□ -1.28
FNDC3B-201ENST00000336824 LINC00587B1AMM8 73 aa7.08□□□□□ -1.28
FNDC3B-201ENST00000336824 GFI1BQ5VTD9 330 aa7.08□□□□□ -1.28
FNDC3B-201ENST00000336824 TMEM243Q9BU79 118 aa7.08□□□□□ -1.28
FNDC3B-201ENST00000336824 GAGE12JA6NER3 117 aa7.08□□□□□ -1.28
FNDC3B-201ENST00000336824 PSCAO43653 123 aa7.08□□□□□ -1.28
FNDC3B-201ENST00000336824 GAGE1Q13065 139 aa7.08□□□□□ -1.28
FNDC3B-201ENST00000336824 GAGE4Q13068 117 aa7.08□□□□□ -1.28
FNDC3B-201ENST00000336824 GAGE5Q13069 117 aa7.08□□□□□ -1.28
FNDC3B-201ENST00000336824 GAGE13Q4V321 117 aa7.08□□□□□ -1.28
FNDC3B-201ENST00000336824 APOMO95445 188 aa7.08□□□□□ -1.28
FNDC3B-201ENST00000336824 DNAJC30Q96LL9 226 aa7.08□□□□□ -1.28
FNDC3B-201ENST00000336824 Q8N8P6 123 aa7.08□□□□□ -1.28
FNDC3B-201ENST00000336824 MRPL16Q9NX20 251 aaKnown RBP7.08□□□□□ -1.28
FNDC3B-201ENST00000336824 Q0VG73 95 aa7.07□□□□□ -1.28
FNDC3B-201ENST00000336824 TMEM263Q8WUH6 116 aaKnown RBP7.07□□□□□ -1.28
FNDC3B-201ENST00000336824 SETD2Q9BYW2 2564 aaPredicted RBP7.07□□□□□ -1.28
FNDC3B-201ENST00000336824 SDHAF1A6NFY7 115 aa7.07□□□□□ -1.28
FNDC3B-201ENST00000336824 C5orf52A6NGY3 159 aa7.07□□□□□ -1.28
FNDC3B-201ENST00000336824 TMEM141Q96I45 108 aa7.07□□□□□ -1.28
FNDC3B-201ENST00000336824 ZNRF2Q8NHG8 242 aa7.07□□□□□ -1.28
FNDC3B-201ENST00000336824 J3QR89 54 aa7.07□□□□□ -1.28
FNDC3B-201ENST00000336824 CKS1BP61024 79 aa7.07□□□□□ -1.28
FNDC3B-201ENST00000336824 DMRTA1Q5VZB9 504 aa7.07□□□□□ -1.28
FNDC3B-201ENST00000336824 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.07□□□□□ -1.28
FNDC3B-201ENST00000336824 PRAC2D3DTV9 90 aa7.06□□□□□ -1.28
FNDC3B-201ENST00000336824 PLA2G2EQ9NZK7 142 aa7.06□□□□□ -1.28
FNDC3B-201ENST00000336824 LBHQ53QV2 105 aaPredicted RBP7.06□□□□□ -1.28
FNDC3B-201ENST00000336824 RMI2Q96E14 147 aa7.06□□□□□ -1.28
FNDC3B-201ENST00000336824 MTORP42345 2549 aa7.06□□□□□ -1.28
FNDC3B-201ENST00000336824 GTF2H5Q6ZYL4 71 aa7.06□□□□□ -1.28
FNDC3B-201ENST00000336824 ACANP16112 2415 aa7.06□□□□□ -1.28
FNDC3B-201ENST00000336824 C10orf99Q6UWK7 81 aa7.06□□□□□ -1.28
FNDC3B-201ENST00000336824 Q6ZS46 218 aa7.06□□□□□ -1.28
FNDC3B-201ENST00000336824 SMIM9A6NGZ8 99 aa7.06□□□□□ -1.28
FNDC3B-201ENST00000336824 IL17DQ8TAD2 202 aa7.06□□□□□ -1.28
FNDC3B-201ENST00000336824 XIRP2A4UGR9 3374 aa7.06□□□□□ -1.28
FNDC3B-201ENST00000336824 ATP5G1P05496 136 aa7.05□□□□□ -1.28
FNDC3B-201ENST00000336824 HINT1P49773 126 aaPredicted RBP7.05□□□□□ -1.28
FNDC3B-201ENST00000336824 IGHV1-24A0A0C4DH33 117 aa7.05□□□□□ -1.28
FNDC3B-201ENST00000336824 Q8N1Y9 231 aa7.05□□□□□ -1.28
FNDC3B-201ENST00000336824 ZNF503Q96F45 646 aa7.05□□□□□ -1.28
FNDC3B-201ENST00000336824 IGKV3D-20A0A0C4DH25 116 aa7.05□□□□□ -1.28
FNDC3B-201ENST00000336824 DEFB135Q30KP9 77 aa7.05□□□□□ -1.28
FNDC3B-201ENST00000336824 RASL10AQ92737 203 aa7.05□□□□□ -1.28
FNDC3B-201ENST00000336824 SMIM2Q9BVW6 85 aa7.05□□□□□ -1.28
FNDC3B-201ENST00000336824 PLEKHB2Q96CS7 222 aa7.05□□□□□ -1.28
FNDC3B-201ENST00000336824 HIST1H2BLQ99880 126 aa7.05□□□□□ -1.28
FNDC3B-201ENST00000336824 SPRY2O43597 315 aa7.05□□□□□ -1.28
FNDC3B-201ENST00000336824 DAZ2Q13117 558 aaKnown RBP7.04□□□□□ -1.28
FNDC3B-201ENST00000336824 DAZ4Q86SG3 579 aaKnown RBP7.04□□□□□ -1.28
FNDC3B-201ENST00000336824 HIST3H2BBQ8N257 126 aa7.04□□□□□ -1.28
FNDC3B-201ENST00000336824 DEFB125Q8N687 156 aa7.04□□□□□ -1.28
FNDC3B-201ENST00000336824 DAZ3Q9NR90 486 aaKnown RBP7.04□□□□□ -1.28
FNDC3B-201ENST00000336824 COL6A3P12111 3177 aa7.04□□□□□ -1.28
FNDC3B-201ENST00000336824 MRPL23Q16540 153 aaKnown RBP7.04□□□□□ -1.28
FNDC3B-201ENST00000336824 C18orf32Q8TCD1 76 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms