RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 DEC1Q9P2X7 70 aa6.5□□□□□ -1.37
TDP1-201ENST00000335725 GOLGB1Q14789 3259 aaKnown RBP6.5□□□□□ -1.37
TDP1-201ENST00000335725 NXPH4O95158 308 aa6.5□□□□□ -1.37
TDP1-201ENST00000335725 CCL4L1Q8NHW4 92 aa6.5□□□□□ -1.37
TDP1-201ENST00000335725 KLKP1Q107X0 134 aa6.5□□□□□ -1.37
TDP1-201ENST00000335725 TMEM141Q96I45 108 aa6.5□□□□□ -1.37
TDP1-201ENST00000335725 IGHV3OR16-10A0A075B7F0 116 aa6.49□□□□□ -1.37
TDP1-201ENST00000335725 A0A087WVE0 104 aa6.49□□□□□ -1.37
TDP1-201ENST00000335725 TSPEAR-AS2P59090 65 aa6.49□□□□□ -1.37
TDP1-201ENST00000335725 HES7Q9BYE0 225 aa6.49□□□□□ -1.37
TDP1-201ENST00000335725 LINC00474Q9P2X8 69 aa6.49□□□□□ -1.37
TDP1-201ENST00000335725 ZNF491Q8N8L2 437 aa6.49□□□□□ -1.37
TDP1-201ENST00000335725 NDUFA4L2Q9NRX3 87 aa6.49□□□□□ -1.37
TDP1-201ENST00000335725 IGLV4-69A0A075B6H9 119 aa6.49□□□□□ -1.37
TDP1-201ENST00000335725 IGHV1-58A0A0C4DH39 117 aa6.49□□□□□ -1.37
TDP1-201ENST00000335725 PPP1R17O96001 155 aa6.49□□□□□ -1.37
TDP1-201ENST00000335725 LOXP28300 417 aaPredicted RBP6.49□□□□□ -1.37
TDP1-201ENST00000335725 MED12Q93074 2177 aa6.48□□□□□ -1.37
TDP1-201ENST00000335725 TRAV7A0A075B6U4 112 aa6.48□□□□□ -1.37
TDP1-201ENST00000335725 COX7A2LO14548 114 aa6.48□□□□□ -1.37
TDP1-201ENST00000335725 SUMO2P61956 95 aaKnown RBP6.48□□□□□ -1.37
TDP1-201ENST00000335725 LYPD5Q6UWN5 251 aa6.48□□□□□ -1.37
TDP1-201ENST00000335725 IMMP1LQ96LU5 166 aa6.48□□□□□ -1.37
TDP1-201ENST00000335725 Q9UF83 564 aa6.48□□□□□ -1.37
TDP1-201ENST00000335725 A0A1W2PP55 124 aa6.48□□□□□ -1.37
TDP1-201ENST00000335725 DAD1P61803 113 aa6.48□□□□□ -1.37
TDP1-201ENST00000335725 M0R1W7 72 aa6.47□□□□□ -1.37
TDP1-201ENST00000335725 LYZP61626 148 aa6.47□□□□□ -1.37
TDP1-201ENST00000335725 PDE6HQ13956 83 aa6.47□□□□□ -1.37
TDP1-201ENST00000335725 ZNF826PQ6ZT77 177 aa6.47□□□□□ -1.37
TDP1-201ENST00000335725 PCNTO95613 3336 aa6.47□□□□□ -1.37
TDP1-201ENST00000335725 C17orf82Q86X59 251 aaPredicted RBP6.47□□□□□ -1.37
TDP1-201ENST00000335725 DEFB118Q96PH6 123 aa6.47□□□□□ -1.37
TDP1-201ENST00000335725 TRAV12-3A0A0B4J271 114 aa6.47□□□□□ -1.37
TDP1-201ENST00000335725 NDUFB3O43676 98 aa6.47□□□□□ -1.37
TDP1-201ENST00000335725 IGHV1OR21-1A0A087WYE8 117 aa6.46□□□□□ -1.38
TDP1-201ENST00000335725 A0A0J9YXY3 114 aa6.46□□□□□ -1.38
TDP1-201ENST00000335725 TMEM61Q8N0U2 210 aa6.46□□□□□ -1.38
TDP1-201ENST00000335725 TRAV13-2A0A0B4J235 113 aa6.46□□□□□ -1.38
TDP1-201ENST00000335725 TEX22C9J3V5 150 aa6.46□□□□□ -1.38
TDP1-201ENST00000335725 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.46□□□□□ -1.38
TDP1-201ENST00000335725 DGAT2L7PQ6IED9 249 aa6.46□□□□□ -1.38
TDP1-201ENST00000335725 MPLKIPQ8TAP9 179 aa6.46□□□□□ -1.38
TDP1-201ENST00000335725 FER1L5A0AVI2 2057 aa6.45□□□□□ -1.38
TDP1-201ENST00000335725 PATE1Q8WXA2 126 aa6.45□□□□□ -1.38
TDP1-201ENST00000335725 F8WEM9 126 aa6.45□□□□□ -1.38
TDP1-201ENST00000335725 SAA1P0DJI8 122 aaPredicted RBP6.45□□□□□ -1.38
TDP1-201ENST00000335725 PMS2CLQ68D20 193 aa6.45□□□□□ -1.38
TDP1-201ENST00000335725 MRPL53Q96EL3 112 aaKnown RBP6.45□□□□□ -1.38
TDP1-201ENST00000335725 TIMM17AQ99595 171 aa6.45□□□□□ -1.38
TDP1-201ENST00000335725 TRBV10-3A0A0K0K1G6 114 aa6.45□□□□□ -1.38
TDP1-201ENST00000335725 IGHV3-48P01763 117 aa6.45□□□□□ -1.38
TDP1-201ENST00000335725 SPINK2P20155 84 aa6.45□□□□□ -1.38
TDP1-201ENST00000335725 LY6G5BQ8NDX9 201 aa6.45□□□□□ -1.38
TDP1-201ENST00000335725 OVOL2Q9BRP0 275 aa6.45□□□□□ -1.38
TDP1-201ENST00000335725 SAA2P0DJI9 122 aaPredicted RBP6.44□□□□□ -1.38
TDP1-201ENST00000335725 MSMPQ1L6U9 139 aa6.44□□□□□ -1.38
TDP1-201ENST00000335725 M0R1B8 84 aa6.44□□□□□ -1.38
TDP1-201ENST00000335725 GRPP07492 148 aa6.44□□□□□ -1.38
TDP1-201ENST00000335725 MIAQ16674 131 aa6.44□□□□□ -1.38
TDP1-201ENST00000335725 SPANXN1Q5VSR9 72 aa6.44□□□□□ -1.38
TDP1-201ENST00000335725 TRAV23DV6A0A075B6W5 121 aa6.43□□□□□ -1.38
TDP1-201ENST00000335725 IGIPA6NJ69 53 aa6.43□□□□□ -1.38
TDP1-201ENST00000335725 BLCAPP62952 87 aa6.43□□□□□ -1.38
TDP1-201ENST00000335725 ZNF876PQ49A33 203 aa6.43□□□□□ -1.38
TDP1-201ENST00000335725 M0R381 172 aa6.43□□□□□ -1.38
TDP1-201ENST00000335725 WDR86Q86TI4 376 aa6.43□□□□□ -1.38
TDP1-201ENST00000335725 MRPL36Q9P0J6 103 aaKnown RBP6.43□□□□□ -1.38
TDP1-201ENST00000335725 DSCAML1Q8TD84 2053 aa6.43□□□□□ -1.38
TDP1-201ENST00000335725 IGHV4-4A0A075B6R2 117 aa6.42□□□□□ -1.38
TDP1-201ENST00000335725 IBA57-AS1B1ANH7 110 aa6.42□□□□□ -1.38
TDP1-201ENST00000335725 TRGV3P03979 118 aa6.42□□□□□ -1.38
TDP1-201ENST00000335725 DCTN5Q9BTE1 182 aa6.42□□□□□ -1.38
TDP1-201ENST00000335725 LINC00846Q9NV44 126 aa6.42□□□□□ -1.38
TDP1-201ENST00000335725 RBM12B-AS1Q9P1G2 102 aa6.42□□□□□ -1.38
TDP1-201ENST00000335725 PRRC2BQ5JSZ5 2229 aaKnown RBP6.42□□□□□ -1.38
TDP1-201ENST00000335725 C2orf16Q68DN1 1984 aa6.42□□□□□ -1.38
TDP1-201ENST00000335725 NTN3O00634 580 aaPredicted RBP6.42□□□□□ -1.38
TDP1-201ENST00000335725 WT1-ASQ06250 92 aa6.42□□□□□ -1.38
TDP1-201ENST00000335725 E7EUB6 86 aa6.42□□□□□ -1.38
TDP1-201ENST00000335725 ADAMTSL4-AS1Q5T5F5 129 aa6.42□□□□□ -1.38
TDP1-201ENST00000335725 SOCS3O14543 225 aa6.41□□□□□ -1.38
TDP1-201ENST00000335725 TMEM167AQ8TBQ9 72 aa6.41□□□□□ -1.38
TDP1-201ENST00000335725 H3BRN7 92 aa6.41□□□□□ -1.38
TDP1-201ENST00000335725 TRBV12-3P01733 135 aa6.41□□□□□ -1.38
TDP1-201ENST00000335725 RPL28P46779 137 aaKnown RBP6.41□□□□□ -1.38
TDP1-201ENST00000335725 OXLD1Q5BKU9 147 aa6.41□□□□□ -1.38
TDP1-201ENST00000335725 KTN1-AS1Q86SY8 53 aa6.41□□□□□ -1.38
TDP1-201ENST00000335725 APOC4P55056 127 aa6.41□□□□□ -1.38
TDP1-201ENST00000335725 ESRGQ1W209 222 aa6.41□□□□□ -1.38
TDP1-201ENST00000335725 DYNLRB2Q8TF09 96 aa6.41□□□□□ -1.38
TDP1-201ENST00000335725 TM2D3Q9BRN9 247 aa6.41□□□□□ -1.38
TDP1-201ENST00000335725 IGHV3-20A0A0C4DH32 117 aa6.4□□□□□ -1.38
TDP1-201ENST00000335725 LYRM9A8MSI8 78 aa6.4□□□□□ -1.38
TDP1-201ENST00000335725 ZNF80P51504 273 aaPredicted RBP6.4□□□□□ -1.38
TDP1-201ENST00000335725 BEAN1Q3B7T3 259 aa6.4□□□□□ -1.38
TDP1-201ENST00000335725 UBE2E2Q96LR5 201 aa6.4□□□□□ -1.38
TDP1-201ENST00000335725 C11orf68Q9H3H3 251 aaKnown RBP6.4□□□□□ -1.38
TDP1-201ENST00000335725 NACAE9PAV3 2078 aa6.4□□□□□ -1.38
TDP1-201ENST00000335725 MRPL33O75394 65 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms