RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 KLK9Q2XQG4 91 aa17.92■□□□□ 0.46
TSKU-201ENST00000333090 C9orf139Q6ZV77 190 aa17.92■□□□□ 0.46
TSKU-201ENST00000333090 ZFAND2AQ8N6M9 145 aa17.92■□□□□ 0.46
TSKU-201ENST00000333090 AJUBAQ96IF1 538 aa17.92■□□□□ 0.46
TSKU-201ENST00000333090 KLK9Q9UKQ9 250 aa17.92■□□□□ 0.46
TSKU-201ENST00000333090 LINC00527Q9UJ94 153 aa17.91■□□□□ 0.46
TSKU-201ENST00000333090 TRAV21A0A0B4J279 112 aa17.91■□□□□ 0.46
TSKU-201ENST00000333090 LOC107984156A0A0G2JMH3 177 aa17.9■□□□□ 0.46
TSKU-201ENST00000333090 ARL17AQ8IVW1 177 aa17.9■□□□□ 0.46
TSKU-201ENST00000333090 KLHL30-AS1Q8NEE0 82 aa17.9■□□□□ 0.46
TSKU-201ENST00000333090 ATP6V0BQ99437 205 aa17.9■□□□□ 0.46
TSKU-201ENST00000333090 SPOCK3Q9BQ16 436 aa17.9■□□□□ 0.46
TSKU-201ENST00000333090 A0A1B0GV72 72 aa17.9■□□□□ 0.46
TSKU-201ENST00000333090 TMEM238LA0A1B0GVL6 79 aa17.9■□□□□ 0.46
TSKU-201ENST00000333090 A6NJY4 79 aa17.9■□□□□ 0.46
TSKU-201ENST00000333090 ANXA2RQ3ZCQ2 193 aa17.9■□□□□ 0.46
TSKU-201ENST00000333090 DEFB104AQ8WTQ1 72 aa17.9■□□□□ 0.46
TSKU-201ENST00000333090 GLMPQ8WWB7 406 aa17.9■□□□□ 0.46
TSKU-201ENST00000333090 ITLN2Q8WWU7 325 aaPredicted RBP17.9■□□□□ 0.46
TSKU-201ENST00000333090 LENEPQ9Y5L5 61 aa17.9■□□□□ 0.46
TSKU-201ENST00000333090 RNF223E7ERA6 249 aa17.89■□□□□ 0.45
TSKU-201ENST00000333090 UBE2E1P51965 193 aa17.89■□□□□ 0.45
TSKU-201ENST00000333090 OR10J6PQ8NGY7 276 aa17.89■□□□□ 0.45
TSKU-201ENST00000333090 DLX4Q92988 240 aaPredicted RBP17.89■□□□□ 0.45
TSKU-201ENST00000333090 LINC00477Q96M19 166 aa17.89■□□□□ 0.45
TSKU-201ENST00000333090 EMP1P54849 157 aa17.88■□□□□ 0.45
TSKU-201ENST00000333090 A0A1W2PPR1 153 aa17.87■□□□□ 0.45
TSKU-201ENST00000333090 DUSP14O95147 198 aaKnown RBP17.87■□□□□ 0.45
TSKU-201ENST00000333090 PSMB2P49721 201 aa17.87■□□□□ 0.45
TSKU-201ENST00000333090 CFAP126Q5VTH2 177 aa17.87■□□□□ 0.45
TSKU-201ENST00000333090 TMEM219Q86XT9 240 aa17.87■□□□□ 0.45
TSKU-201ENST00000333090 CENPVL3A0A0U1RRI6 287 aa17.87■□□□□ 0.45
TSKU-201ENST00000333090 GNRH2O43555 120 aa17.87■□□□□ 0.45
TSKU-201ENST00000333090 RNASE4P34096 147 aaKnown RBP17.87■□□□□ 0.45
TSKU-201ENST00000333090 SMCPP49901 116 aaPredicted RBP17.87■□□□□ 0.45
TSKU-201ENST00000333090 FOXI1Q12951 378 aa17.87■□□□□ 0.45
TSKU-201ENST00000333090 C1QTNF4Q9BXJ3 329 aa17.86■□□□□ 0.45
TSKU-201ENST00000333090 TSPAN13O95857 204 aa17.86■□□□□ 0.45
TSKU-201ENST00000333090 COX6B1P14854 86 aa17.86■□□□□ 0.45
TSKU-201ENST00000333090 UNQ9165/PRO28630Q6UXU0 137 aa17.86■□□□□ 0.45
TSKU-201ENST00000333090 ZFP2Q6ZN57 461 aa17.86■□□□□ 0.45
TSKU-201ENST00000333090 GPHB5Q86YW7 130 aa17.85■□□□□ 0.45
TSKU-201ENST00000333090 UBE2D1P51668 147 aa17.85■□□□□ 0.45
TSKU-201ENST00000333090 ZNF418Q8TF45 676 aaPredicted RBP17.85■□□□□ 0.45
TSKU-201ENST00000333090 F6UB75 175 aa17.85■□□□□ 0.45
TSKU-201ENST00000333090 ARL3P36405 182 aa17.85■□□□□ 0.45
TSKU-201ENST00000333090 RPL11P62913 178 aaKnown RBP17.85■□□□□ 0.45
TSKU-201ENST00000333090 SYT8Q8NBV8 401 aa17.85■□□□□ 0.45
TSKU-201ENST00000333090 IGKV3-7A0A075B6H7 116 aa17.84■□□□□ 0.45
TSKU-201ENST00000333090 C5orf56Q8N8D9 126 aa17.84■□□□□ 0.45
TSKU-201ENST00000333090 C11orf86A6NJI1 115 aa17.84■□□□□ 0.45
TSKU-201ENST00000333090 CRYGDP07320 174 aa17.84■□□□□ 0.45
TSKU-201ENST00000333090 TRBV12-3P01733 135 aa17.83■□□□□ 0.45
TSKU-201ENST00000333090 NFE4Q86UQ8 179 aa17.83■□□□□ 0.45
TSKU-201ENST00000333090 CSMD2Q7Z408 3487 aa17.82■□□□□ 0.44
TSKU-201ENST00000333090 TRAV41A0A0B4J266 112 aa17.82■□□□□ 0.44
TSKU-201ENST00000333090 OVOL1O14753 267 aa17.82■□□□□ 0.44
TSKU-201ENST00000333090 LY6DQ14210 128 aa17.82■□□□□ 0.44
TSKU-201ENST00000333090 TP53TG1Q9Y2A0 90 aa17.82■□□□□ 0.44
TSKU-201ENST00000333090 RNASE3P12724 160 aaKnown RBP17.82■□□□□ 0.44
TSKU-201ENST00000333090 PTH2Q96A98 100 aa17.82■□□□□ 0.44
TSKU-201ENST00000333090 CKS1BP61024 79 aa17.81■□□□□ 0.44
TSKU-201ENST00000333090 CD7P09564 240 aa17.81■□□□□ 0.44
TSKU-201ENST00000333090 IGLV4-69A0A075B6H9 119 aa17.8■□□□□ 0.44
TSKU-201ENST00000333090 TSHBP01222 138 aa17.8■□□□□ 0.44
TSKU-201ENST00000333090 PPP1R17O96001 155 aa17.8■□□□□ 0.44
TSKU-201ENST00000333090 ATP6V0E2Q8NHE4 81 aa17.8■□□□□ 0.44
TSKU-201ENST00000333090 MUC4Q99102 2169 aa17.79■□□□□ 0.44
TSKU-201ENST00000333090 SOCS3O14543 225 aa17.79■□□□□ 0.44
TSKU-201ENST00000333090 NPFFO15130 113 aa17.79■□□□□ 0.44
TSKU-201ENST00000333090 HERVK_113P61574 105 aa17.79■□□□□ 0.44
TSKU-201ENST00000333090 CELSR2Q9HCU4 2923 aa17.79■□□□□ 0.44
TSKU-201ENST00000333090 A0A0J9YY99 117 aa17.78■□□□□ 0.44
TSKU-201ENST00000333090 UBE2D3P61077 147 aa17.78■□□□□ 0.44
TSKU-201ENST00000333090 UBE2D2P62837 147 aa17.78■□□□□ 0.44
TSKU-201ENST00000333090 RPL39P62891 51 aaKnown RBP17.78■□□□□ 0.44
TSKU-201ENST00000333090 FAM223BA6NKX1 122 aa17.78■□□□□ 0.44
TSKU-201ENST00000333090 KLRB1Q12918 225 aa17.78■□□□□ 0.44
TSKU-201ENST00000333090 NDUFA11Q86Y39 141 aa17.78■□□□□ 0.44
TSKU-201ENST00000333090 FAM223AQ8IWN6 122 aa17.78■□□□□ 0.44
TSKU-201ENST00000333090 CDIP1Q9H305 208 aa17.78■□□□□ 0.44
TSKU-201ENST00000333090 IGHV3OR16-10A0A075B7F0 116 aa17.78■□□□□ 0.44
TSKU-201ENST00000333090 MED14OSP0DP75 135 aa17.78■□□□□ 0.44
TSKU-201ENST00000333090 JPT2Q9H910 190 aa17.78■□□□□ 0.44
TSKU-201ENST00000333090 Q6ZS46 218 aa17.77■□□□□ 0.44
TSKU-201ENST00000333090 WFDC12Q8WWY7 111 aa17.77■□□□□ 0.44
TSKU-201ENST00000333090 CRYBG3Q68DQ2 2970 aa17.77■□□□□ 0.43
TSKU-201ENST00000333090 TGFAP01135 160 aa17.76■□□□□ 0.43
TSKU-201ENST00000333090 TCTEX1D4Q5JR98 221 aa17.76■□□□□ 0.43
TSKU-201ENST00000333090 TMEM170BQ5T4T1 132 aa17.76■□□□□ 0.43
TSKU-201ENST00000333090 IGIPA6NJ69 53 aa17.76■□□□□ 0.43
TSKU-201ENST00000333090 IGHV3-11P01762 117 aa17.76■□□□□ 0.43
TSKU-201ENST00000333090 PMVKQ15126 192 aa17.76■□□□□ 0.43
TSKU-201ENST00000333090 TSPEAR-AS2P59090 65 aa17.75■□□□□ 0.43
TSKU-201ENST00000333090 FHL3Q13643 280 aa17.75■□□□□ 0.43
TSKU-201ENST00000333090 PAPPA-AS1Q5QFB9 102 aa17.75■□□□□ 0.43
TSKU-201ENST00000333090 LYRM7Q5U5X0 104 aa17.75■□□□□ 0.43
TSKU-201ENST00000333090 SPG11Q96JI7 2443 aa17.75■□□□□ 0.43
TSKU-201ENST00000333090 IGHV1-69DA0A0B4J2H0 117 aa17.75■□□□□ 0.43
TSKU-201ENST00000333090 LINC00315P59091 139 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms