RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 C6orf226Q5I0X4 101 aa4.45□□□□□ -1.7
SMG1-201ENST00000330588 PQLC2Q6ZP29 291 aa4.45□□□□□ -1.7
SMG1-201ENST00000330588 THAP6Q8TBB0 222 aa4.45□□□□□ -1.7
SMG1-201ENST00000330588 SCGB1C1Q8TD33 95 aa4.45□□□□□ -1.7
SMG1-201ENST00000330588 ORAOV1Q8WV07 137 aa4.45□□□□□ -1.7
SMG1-201ENST00000330588 FXYD5Q96DB9 178 aa4.45□□□□□ -1.7
SMG1-201ENST00000330588 PAXXQ9BUH6 204 aa4.45□□□□□ -1.7
SMG1-201ENST00000330588 TP53TG3Q9ULZ0 132 aa4.45□□□□□ -1.7
SMG1-201ENST00000330588 KMT2CQ8NEZ4 4911 aaKnown RBP4.45□□□□□ -1.7
SMG1-201ENST00000330588 C1orf196B1AJZ1 125 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 ZNF324O75467 553 aaPredicted RBP4.44□□□□□ -1.7
SMG1-201ENST00000330588 PYYP10082 97 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 AZU1P20160 251 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 CSN1S1P47710 185 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 CAMPP49913 170 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 SNRPEP62304 92 aaKnown RBP4.44□□□□□ -1.7
SMG1-201ENST00000330588 ACOT6Q3I5F7 207 aaPredicted RBP4.44□□□□□ -1.7
SMG1-201ENST00000330588 TMEM78Q5T7P6 136 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 Q6ZR54 194 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 LINC01551Q86U37 167 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 OR2G3Q8NGZ4 309 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 RXFP4Q8TDU9 374 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 HYLS1Q96M11 299 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 AQP10Q96PS8 301 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 PSMG3Q9BT73 122 aaPredicted RBP4.44□□□□□ -1.7
SMG1-201ENST00000330588 AGPAT4-IT1Q9H0P7 198 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 ZNF492Q9P255 531 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 CSDC2Q9Y534 153 aaKnown RBP4.44□□□□□ -1.7
SMG1-201ENST00000330588 DYNC2H1Q8NCM8 4307 aaKnown RBP4.44□□□□□ -1.7
SMG1-201ENST00000330588 A0A0U1RRA0 63 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 SNURFLB1AK76 121 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 M0R3E3 92 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 GIPP09681 153 aaPredicted RBP4.44□□□□□ -1.7
SMG1-201ENST00000330588 ZNF138P52744 262 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 TCL1AP56279 114 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 SUMO2P61956 95 aaKnown RBP4.44□□□□□ -1.7
SMG1-201ENST00000330588 SERF2P84101 59 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 OCIAD2Q56VL3 154 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 FFAR4Q5NUL3 377 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 FAM74A1Q5RGS3 127 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 MIR17HGQ75NE6 70 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 ZFAND2AQ8N6M9 145 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 C11orf72Q8NBR9 251 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 SNHG12Q9BXW3 62 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 NKX6-2Q9C056 277 aaPredicted RBP4.44□□□□□ -1.7
SMG1-201ENST00000330588 OTORQ9NRC9 128 aa4.44□□□□□ -1.7
SMG1-201ENST00000330588 TGIF2-C20orf24A0A0A6YYL0 155 aa4.43□□□□□ -1.7
SMG1-201ENST00000330588 H3BTX0 84 aa4.43□□□□□ -1.7
SMG1-201ENST00000330588 OR7C2O60412 319 aa4.43□□□□□ -1.7
SMG1-201ENST00000330588 GPX1P07203 203 aa4.43□□□□□ -1.7
SMG1-201ENST00000330588 UBE2L3P68036 154 aaKnown RBP4.43□□□□□ -1.7
SMG1-201ENST00000330588 PYY3Q5JQD4 70 aa4.43□□□□□ -1.7
SMG1-201ENST00000330588 Q6AWC8 147 aa4.43□□□□□ -1.7
SMG1-201ENST00000330588 UBE2DNLQ8IWF7 75 aa4.43□□□□□ -1.7
SMG1-201ENST00000330588 EXOC3-AS1Q8N2X6 119 aa4.43□□□□□ -1.7
SMG1-201ENST00000330588 BLNKQ8WV28 456 aa4.43□□□□□ -1.7
SMG1-201ENST00000330588 PHYHIPLQ96FC7 376 aa4.43□□□□□ -1.7
SMG1-201ENST00000330588 ATG101Q9BSB4 218 aa4.43□□□□□ -1.7
SMG1-201ENST00000330588 MED28Q9H204 178 aa4.43□□□□□ -1.7
SMG1-201ENST00000330588 Q9H3A6 140 aa4.43□□□□□ -1.7
SMG1-201ENST00000330588 NOP10Q9NPE3 64 aaKnown RBP4.43□□□□□ -1.7
SMG1-201ENST00000330588 LYSTQ99698 3801 aa4.43□□□□□ -1.7
SMG1-201ENST00000330588 ALMS1Q8TCU4 4167 aa4.42□□□□□ -1.7
SMG1-201ENST00000330588 TRAV12-3A0A0B4J271 114 aa4.42□□□□□ -1.7
SMG1-201ENST00000330588 FAM74A7A6NL05 159 aa4.42□□□□□ -1.7
SMG1-201ENST00000330588 F5H768 121 aa4.42□□□□□ -1.7
SMG1-201ENST00000330588 F6UZH7 168 aa4.42□□□□□ -1.7
SMG1-201ENST00000330588 PPP1R2P9O14990 202 aa4.42□□□□□ -1.7
SMG1-201ENST00000330588 DEFB130BP0DP73 79 aa4.42□□□□□ -1.7
SMG1-201ENST00000330588 DEFB130AP0DP74 79 aa4.42□□□□□ -1.7
SMG1-201ENST00000330588 HTN3P15516 51 aa4.42□□□□□ -1.7
SMG1-201ENST00000330588 CCL18P55774 89 aa4.42□□□□□ -1.7
SMG1-201ENST00000330588 UBE2V1Q13404 147 aa4.42□□□□□ -1.7
SMG1-201ENST00000330588 TDRG1Q3Y452 100 aa4.42□□□□□ -1.7
SMG1-201ENST00000330588 FAM74A3Q4VXF1 159 aa4.42□□□□□ -1.7
SMG1-201ENST00000330588 PDZD11Q5EBL8 140 aa4.42□□□□□ -1.7
SMG1-201ENST00000330588 SOHLH1Q5JUK2 328 aa4.42□□□□□ -1.7
SMG1-201ENST00000330588 GNPNAT1Q96EK6 184 aaPredicted RBP4.42□□□□□ -1.7
SMG1-201ENST00000330588 UPK3BQ9BT76 320 aa4.42□□□□□ -1.7
SMG1-201ENST00000330588 IGHV1OR15-1A0A075B7D0 117 aa4.41□□□□□ -1.7
SMG1-201ENST00000330588 IGKV2-40A0A087WW87 121 aaPredicted RBP4.41□□□□□ -1.7
SMG1-201ENST00000330588 PDE6DO43924 150 aa4.41□□□□□ -1.7
SMG1-201ENST00000330588 SPINK4O60575 86 aa4.41□□□□□ -1.7
SMG1-201ENST00000330588 IGKV2D-40P01614 121 aaPredicted RBP4.41□□□□□ -1.7
SMG1-201ENST00000330588 PRM2P04554 102 aa4.41□□□□□ -1.7
SMG1-201ENST00000330588 SNRPCP09234 159 aaKnown RBP4.41□□□□□ -1.7
SMG1-201ENST00000330588 CKS1BP61024 79 aa4.41□□□□□ -1.7
SMG1-201ENST00000330588 FABP9Q0Z7S8 132 aa4.41□□□□□ -1.7
SMG1-201ENST00000330588 ERCC8Q13216 396 aa4.41□□□□□ -1.7
SMG1-201ENST00000330588 FAM159AQ6UWV7 190 aa4.41□□□□□ -1.7
SMG1-201ENST00000330588 ISOC2Q96AB3 205 aa4.41□□□□□ -1.7
SMG1-201ENST00000330588 VGLL1Q99990 258 aa4.41□□□□□ -1.7
SMG1-201ENST00000330588 TNFSF18Q9UNG2 199 aa4.41□□□□□ -1.7
SMG1-201ENST00000330588 KLF12Q9Y4X4 402 aa4.41□□□□□ -1.7
SMG1-201ENST00000330588 BORCS7-ASMTA0A0B4J1R7 106 aa4.4□□□□□ -1.7
SMG1-201ENST00000330588 A0A1B0GVY2 172 aa4.4□□□□□ -1.7
SMG1-201ENST00000330588 TAAR5O14804 337 aa4.4□□□□□ -1.7
SMG1-201ENST00000330588 HTN1P15515 57 aa4.4□□□□□ -1.7
SMG1-201ENST00000330588 S100A2P29034 98 aa4.4□□□□□ -1.7
SMG1-201ENST00000330588 RNASE4P34096 147 aaKnown RBP4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms