RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 CD7P09564 240 aa13.26□□□□□ -0.29
PRKCD-201ENST00000330452 KLRB1Q12918 225 aa13.26□□□□□ -0.29
PRKCD-201ENST00000330452 TMEM219Q86XT9 240 aa13.26□□□□□ -0.29
PRKCD-201ENST00000330452 Q8N1Y9 231 aa13.26□□□□□ -0.29
PRKCD-201ENST00000330452 U3KQK5 164 aa13.26□□□□□ -0.29
PRKCD-201ENST00000330452 UBE2D1P51668 147 aa13.25□□□□□ -0.29
PRKCD-201ENST00000330452 EXOC3-AS1Q8N2X6 119 aa13.25□□□□□ -0.29
PRKCD-201ENST00000330452 C3orf22Q8N5N4 141 aa13.25□□□□□ -0.29
PRKCD-201ENST00000330452 TRAV2A0A0B4J234 112 aa13.25□□□□□ -0.29
PRKCD-201ENST00000330452 TRAV8-4A0A0B4J246 113 aa13.25□□□□□ -0.29
PRKCD-201ENST00000330452 ZNF462Q96JM2 2506 aa13.24□□□□□ -0.29
PRKCD-201ENST00000330452 I3L2K1 104 aa13.24□□□□□ -0.29
PRKCD-201ENST00000330452 SRSF9Q13242 221 aaKnown RBP eCLIP13.24□□□□□ -0.29
PRKCD-201ENST00000330452 TWIST1Q15672 202 aa13.24□□□□□ -0.29
PRKCD-201ENST00000330452 FOXC2Q99958 501 aa13.24□□□□□ -0.29
PRKCD-201ENST00000330452 SLC25A39Q9BZJ4 359 aaPredicted RBP13.24□□□□□ -0.29
PRKCD-201ENST00000330452 TMEM160Q9NX00 188 aa13.24□□□□□ -0.29
PRKCD-201ENST00000330452 TRAV40A0A0B4J280 105 aa13.24□□□□□ -0.29
PRKCD-201ENST00000330452 FMC1Q96HJ9 113 aa13.24□□□□□ -0.29
PRKCD-201ENST00000330452 ASCL2Q99929 193 aa13.24□□□□□ -0.29
PRKCD-201ENST00000330452 TIMM23O14925 209 aa13.23□□□□□ -0.29
PRKCD-201ENST00000330452 ZNF672Q499Z4 452 aaPredicted RBP13.23□□□□□ -0.29
PRKCD-201ENST00000330452 ORMDL3Q8N138 153 aa13.23□□□□□ -0.29
PRKCD-201ENST00000330452 NTN5Q8WTR8 489 aaPredicted RBP13.23□□□□□ -0.29
PRKCD-201ENST00000330452 AAMDCQ9H7C9 122 aa13.23□□□□□ -0.29
PRKCD-201ENST00000330452 IGKV1-17P01599 117 aa13.22□□□□□ -0.29
PRKCD-201ENST00000330452 GOLT1AQ6ZVE7 132 aa13.22□□□□□ -0.29
PRKCD-201ENST00000330452 TRPT1Q86TN4 253 aaKnown RBP13.22□□□□□ -0.29
PRKCD-201ENST00000330452 ZNRF2Q8NHG8 242 aa13.22□□□□□ -0.29
PRKCD-201ENST00000330452 C17orf77Q96MU5 243 aa13.22□□□□□ -0.29
PRKCD-201ENST00000330452 S4R3C0 116 aa13.22□□□□□ -0.29
PRKCD-201ENST00000330452 RBAKDNA6NC62 111 aa13.22□□□□□ -0.29
PRKCD-201ENST00000330452 LY6LH3BQJ8 138 aa13.21□□□□□ -0.29
PRKCD-201ENST00000330452 PRNTQ86SH4 94 aa13.21□□□□□ -0.29
PRKCD-201ENST00000330452 C4orf26Q17RF5 130 aa13.21□□□□□ -0.3
PRKCD-201ENST00000330452 AMN1Q8IY45 258 aa13.21□□□□□ -0.3
PRKCD-201ENST00000330452 A0A1W2PPR1 153 aa13.2□□□□□ -0.3
PRKCD-201ENST00000330452 NCBP2LA6PVI3 153 aaKnown RBP13.2□□□□□ -0.3
PRKCD-201ENST00000330452 CRIP2P52943 208 aaPredicted RBP13.2□□□□□ -0.3
PRKCD-201ENST00000330452 Q86TA4 180 aa13.2□□□□□ -0.3
PRKCD-201ENST00000330452 CFHR4Q92496 578 aa13.2□□□□□ -0.3
PRKCD-201ENST00000330452 OTORQ9NRC9 128 aa13.2□□□□□ -0.3
PRKCD-201ENST00000330452 K7EIM0 57 aa13.2□□□□□ -0.3
PRKCD-201ENST00000330452 IGLV2-11P01706 119 aa13.2□□□□□ -0.3
PRKCD-201ENST00000330452 LINC00526Q96FQ7 95 aa13.2□□□□□ -0.3
PRKCD-201ENST00000330452 TRBV7-7A0A0K0K1E9 115 aa13.19□□□□□ -0.3
PRKCD-201ENST00000330452 UQCRQO14949 82 aa13.19□□□□□ -0.3
PRKCD-201ENST00000330452 FAM104BQ5XKR9 115 aa13.19□□□□□ -0.3
PRKCD-201ENST00000330452 DUX3Q96PT4 197 aa13.19□□□□□ -0.3
PRKCD-201ENST00000330452 MRPL35Q9NZE8 188 aaKnown RBP13.19□□□□□ -0.3
PRKCD-201ENST00000330452 FAM236AA0A1B0GUQ0 79 aa13.19□□□□□ -0.3
PRKCD-201ENST00000330452 FAM236BA0A1B0GV22 79 aa13.19□□□□□ -0.3
PRKCD-201ENST00000330452 HRCT1Q6UXD1 115 aa13.19□□□□□ -0.3
PRKCD-201ENST00000330452 LEPP41159 167 aa13.18□□□□□ -0.3
PRKCD-201ENST00000330452 SMKR1H3BMG3 65 aa13.18□□□□□ -0.3
PRKCD-201ENST00000330452 ATP5LO75964 103 aa13.18□□□□□ -0.3
PRKCD-201ENST00000330452 MRPL51Q4U2R6 128 aaKnown RBP13.18□□□□□ -0.3
PRKCD-201ENST00000330452 TMEM14CQ9P0S9 112 aa13.18□□□□□ -0.3
PRKCD-201ENST00000330452 ZNF785A8K8V0 405 aa13.17□□□□□ -0.3
PRKCD-201ENST00000330452 EFNA4P52798 201 aa13.17□□□□□ -0.3
PRKCD-201ENST00000330452 USP9YO00507 2555 aaPredicted RBP13.17□□□□□ -0.3
PRKCD-201ENST00000330452 SRSF2Q01130 221 aaKnown RBP13.17□□□□□ -0.3
PRKCD-201ENST00000330452 POM121L12Q8N7R1 296 aa13.17□□□□□ -0.3
PRKCD-201ENST00000330452 TIMD4Q96H15 378 aa13.17□□□□□ -0.3
PRKCD-201ENST00000330452 TEX49A0A1B0GTD5 131 aa13.16□□□□□ -0.3
PRKCD-201ENST00000330452 LGALS1P09382 135 aaKnown RBP13.16□□□□□ -0.3
PRKCD-201ENST00000330452 NDUFA11Q86Y39 141 aa13.16□□□□□ -0.3
PRKCD-201ENST00000330452 TRGV11A0A075B6L2 103 aa13.16□□□□□ -0.3
PRKCD-201ENST00000330452 TRBV19A0A075B6N1 114 aa13.16□□□□□ -0.3
PRKCD-201ENST00000330452 CEMP1Q6PRD7 247 aaPredicted RBP13.16□□□□□ -0.3
PRKCD-201ENST00000330452 RNF5Q99942 180 aa13.16□□□□□ -0.3
PRKCD-201ENST00000330452 SHANK2-AS3Q9BTD1 123 aa13.16□□□□□ -0.3
PRKCD-201ENST00000330452 ABCA12Q86UK0 2595 aa13.16□□□□□ -0.3
PRKCD-201ENST00000330452 J3QLI3 93 aa13.16□□□□□ -0.3
PRKCD-201ENST00000330452 NBR2O15453 112 aa13.16□□□□□ -0.3
PRKCD-201ENST00000330452 GNLYP22749 145 aa13.16□□□□□ -0.3
PRKCD-201ENST00000330452 ZNF56Q15929 161 aa13.16□□□□□ -0.3
PRKCD-201ENST00000330452 ZNF491Q8N8L2 437 aa13.16□□□□□ -0.3
PRKCD-201ENST00000330452 LY6G5BQ8NDX9 201 aa13.16□□□□□ -0.3
PRKCD-201ENST00000330452 DPM3Q9P2X0 92 aa13.16□□□□□ -0.3
PRKCD-201ENST00000330452 ZANQ9Y493 2812 aa13.15□□□□□ -0.3
PRKCD-201ENST00000330452 H3BRN7 92 aa13.15□□□□□ -0.31
PRKCD-201ENST00000330452 RPL13AP40429 203 aaKnown RBP13.15□□□□□ -0.31
PRKCD-201ENST00000330452 C19orf84I3L1E1 186 aa13.14□□□□□ -0.31
PRKCD-201ENST00000330452 M0R3E3 92 aa13.14□□□□□ -0.31
PRKCD-201ENST00000330452 LGALS9O00182 355 aa13.14□□□□□ -0.31
PRKCD-201ENST00000330452 ORM1P02763 201 aa13.14□□□□□ -0.31
PRKCD-201ENST00000330452 HOXB4P17483 251 aaPredicted RBP13.14□□□□□ -0.31
PRKCD-201ENST00000330452 PMVKQ15126 192 aa13.14□□□□□ -0.31
PRKCD-201ENST00000330452 SIGLEC15Q6ZMC9 328 aa13.14□□□□□ -0.31
PRKCD-201ENST00000330452 RNF125Q96EQ8 232 aa13.14□□□□□ -0.31
PRKCD-201ENST00000330452 CKS2P33552 79 aa13.14□□□□□ -0.31
PRKCD-201ENST00000330452 EBI3Q14213 229 aa13.13□□□□□ -0.31
PRKCD-201ENST00000330452 MRPS12O15235 138 aaKnown RBP13.13□□□□□ -0.31
PRKCD-201ENST00000330452 Q5XG85 94 aa13.13□□□□□ -0.31
PRKCD-201ENST00000330452 NDUFA3O95167 84 aa13.12□□□□□ -0.31
PRKCD-201ENST00000330452 LINC01559Q495D7 138 aa13.12□□□□□ -0.31
PRKCD-201ENST00000330452 GAGE2AQ6NT46 116 aa13.12□□□□□ -0.31
PRKCD-201ENST00000330452 SPANXCQ9NY87 97 aa13.12□□□□□ -0.31
PRKCD-201ENST00000330452 LINC00477Q96M19 166 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms