RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 HIVEP1P15822 2718 aa15.17■□□□□ 0.02
RIPPLY3-201ENST00000329553 PSMG4Q5JS54 123 aa15.17■□□□□ 0.02
RIPPLY3-201ENST00000329553 ORMDL3Q8N138 153 aa15.17■□□□□ 0.02
RIPPLY3-201ENST00000329553 FAM19A4Q96LR4 140 aa15.17■□□□□ 0.02
RIPPLY3-201ENST00000329553 H0Y8G0 127 aa15.16■□□□□ 0.02
RIPPLY3-201ENST00000329553 CCL24O00175 119 aa15.16■□□□□ 0.02
RIPPLY3-201ENST00000329553 IGLC6P0CF74 106 aa15.16■□□□□ 0.02
RIPPLY3-201ENST00000329553 LINC01559Q495D7 138 aa15.16■□□□□ 0.02
RIPPLY3-201ENST00000329553 PRELID3AQ96N28 172 aa15.16■□□□□ 0.02
RIPPLY3-201ENST00000329553 SETD2Q9BYW2 2564 aaPredicted RBP15.16■□□□□ 0.02
RIPPLY3-201ENST00000329553 IGKV3D-20A0A0C4DH25 116 aa15.16■□□□□ 0.02
RIPPLY3-201ENST00000329553 J3KRW8 73 aa15.16■□□□□ 0.02
RIPPLY3-201ENST00000329553 PROK1P58294 105 aa15.16■□□□□ 0.02
RIPPLY3-201ENST00000329553 SNRPD3P62318 126 aaKnown RBP15.16■□□□□ 0.02
RIPPLY3-201ENST00000329553 FHL3Q13643 280 aa15.16■□□□□ 0.02
RIPPLY3-201ENST00000329553 MRPL51Q4U2R6 128 aaKnown RBP15.16■□□□□ 0.02
RIPPLY3-201ENST00000329553 TIMM8BQ9Y5J9 83 aaPredicted RBP15.16■□□□□ 0.02
RIPPLY3-201ENST00000329553 Q6ZVH6 145 aa15.15■□□□□ 0.02
RIPPLY3-201ENST00000329553 FER1L6-AS1Q8NA97 138 aa15.15■□□□□ 0.02
RIPPLY3-201ENST00000329553 NCR2O95944 276 aa15.15■□□□□ 0.02
RIPPLY3-201ENST00000329553 MPV17L2Q567V2 206 aa15.15■□□□□ 0.02
RIPPLY3-201ENST00000329553 PMCHL2Q9BQD1 86 aa15.15■□□□□ 0.02
RIPPLY3-201ENST00000329553 SORL1Q92673 2214 aa15.14■□□□□ 0.01
RIPPLY3-201ENST00000329553 LOC389332A0A1B0GUA5 103 aa15.13■□□□□ 0.01
RIPPLY3-201ENST00000329553 TCF21O43680 179 aa15.13■□□□□ 0.01
RIPPLY3-201ENST00000329553 MUC21A0A0G2JKD1 596 aa15.13■□□□□ 0.01
RIPPLY3-201ENST00000329553 MUC21A0A140T8X8 626 aa15.13■□□□□ 0.01
RIPPLY3-201ENST00000329553 KIR3DS1Q14943 382 aa15.13■□□□□ 0.01
RIPPLY3-201ENST00000329553 MUC21Q5SSG8 566 aa15.13■□□□□ 0.01
RIPPLY3-201ENST00000329553 FN1P02751 2386 aaKnown RBP15.13■□□□□ 0.01
RIPPLY3-201ENST00000329553 CCL25O15444 150 aa15.12■□□□□ 0.01
RIPPLY3-201ENST00000329553 BVES-AS1Q5T3Y7 98 aa15.12■□□□□ 0.01
RIPPLY3-201ENST00000329553 TMEM61Q8N0U2 210 aa15.12■□□□□ 0.01
RIPPLY3-201ENST00000329553 CNFNQ9BYD5 112 aa15.12■□□□□ 0.01
RIPPLY3-201ENST00000329553 TRBV7-9A0A0J9YWB2 115 aa15.12■□□□□ 0.01
RIPPLY3-201ENST00000329553 TWIST1Q15672 202 aa15.12■□□□□ 0.01
RIPPLY3-201ENST00000329553 A0A0J9YX75 114 aa15.11■□□□□ 0.01
RIPPLY3-201ENST00000329553 NUDT3O95989 172 aa15.11■□□□□ 0.01
RIPPLY3-201ENST00000329553 DEFB114Q30KQ6 69 aa15.11■□□□□ 0.01
RIPPLY3-201ENST00000329553 APRG1Q8IVJ8 170 aa15.11■□□□□ 0.01
RIPPLY3-201ENST00000329553 DYNLRB2Q8TF09 96 aa15.11■□□□□ 0.01
RIPPLY3-201ENST00000329553 WNK1Q9H4A3 2382 aa15.11■□□□□ 0.01
RIPPLY3-201ENST00000329553 SETXQ7Z333 2677 aaKnown RBP15.11■□□□□ 0.01
RIPPLY3-201ENST00000329553 UBE2V1Q13404 147 aa15.11■□□□□ 0.01
RIPPLY3-201ENST00000329553 NSD1Q96L73 2696 aaPredicted RBP15.1■□□□□ 0.01
RIPPLY3-201ENST00000329553 COX8AP10176 69 aa15.1■□□□□ 0.01
RIPPLY3-201ENST00000329553 RNASE4P34096 147 aaKnown RBP15.1■□□□□ 0.01
RIPPLY3-201ENST00000329553 C12orf54Q6X4T0 127 aa15.1■□□□□ 0.01
RIPPLY3-201ENST00000329553 TRAV21A0A0B4J279 112 aa15.09■□□□□ 0.01
RIPPLY3-201ENST00000329553 ADARB2-AS1A8MUL3 147 aa15.09■□□□□ 0.01
RIPPLY3-201ENST00000329553 CRLF1O75462 422 aa15.09■□□□□ 0.01
RIPPLY3-201ENST00000329553 NPYP01303 97 aa15.09■□□□□ 0.01
RIPPLY3-201ENST00000329553 CKS2P33552 79 aa15.09■□□□□ 0.01
RIPPLY3-201ENST00000329553 PTTG1IPP53801 180 aa15.09■□□□□ 0.01
RIPPLY3-201ENST00000329553 AGRNO00468 2067 aa15.09■□□□□ 0.01
RIPPLY3-201ENST00000329553 LGALS9BQ3B8N2 356 aa15.09■□□□□ 0.01
RIPPLY3-201ENST00000329553 LGALS9CQ6DKI2 356 aa15.09■□□□□ 0.01
RIPPLY3-201ENST00000329553 HBDP02042 147 aa15.08■□□□□ 0
RIPPLY3-201ENST00000329553 KRTAP10-3P60369 221 aa15.08■□□□□ 0
RIPPLY3-201ENST00000329553 RNF185Q96GF1 192 aa15.08■□□□□ 0
RIPPLY3-201ENST00000329553 FLNBO75369 2602 aaKnown RBP15.08■□□□□ 0
RIPPLY3-201ENST00000329553 KLLNB2CW77 178 aa15.08■□□□□ 0
RIPPLY3-201ENST00000329553 SMKR1H3BMG3 65 aa15.08■□□□□ 0
RIPPLY3-201ENST00000329553 CD300EQ496F6 205 aaPredicted RBP15.08■□□□□ 0
RIPPLY3-201ENST00000329553 DEFB125Q8N687 156 aa15.08■□□□□ 0
RIPPLY3-201ENST00000329553 IGKV3-20P01619 116 aa15.07■□□□□ 0
RIPPLY3-201ENST00000329553 MSRB1Q9NZV6 116 aa15.07■□□□□ 0
RIPPLY3-201ENST00000329553 TRAV2A0A0B4J234 112 aa15.07■□□□□ 0
RIPPLY3-201ENST00000329553 TAX1BP3O14907 124 aa15.07■□□□□ 0
RIPPLY3-201ENST00000329553 NSUN5P1Q3KNT7 163 aa15.07■□□□□ 0
RIPPLY3-201ENST00000329553 C2orf91Q6ZV80 131 aa15.07■□□□□ 0
RIPPLY3-201ENST00000329553 DEFB131AP59861 70 aa15.06■□□□□ 0
RIPPLY3-201ENST00000329553 LINC01546A6NGU7 62 aa15.05■□□□□ 0
RIPPLY3-201ENST00000329553 PPBPP02775 128 aa15.05■□□□□ 0
RIPPLY3-201ENST00000329553 FOXI2Q6ZQN5 318 aa15.05■□□□□ 0
RIPPLY3-201ENST00000329553 FGF6P10767 208 aa15.05■□□□□ -0
RIPPLY3-201ENST00000329553 ANXA2RQ3ZCQ2 193 aa15.05■□□□□ -0
RIPPLY3-201ENST00000329553 ODF3Q96PU9 254 aa15.05■□□□□ -0
RIPPLY3-201ENST00000329553 FXYD7P58549 80 aa15.04■□□□□ -0
RIPPLY3-201ENST00000329553 DUSP14O95147 198 aaKnown RBP15.04■□□□□ -0
RIPPLY3-201ENST00000329553 ANKRD39Q53RE8 183 aa15.04■□□□□ -0
RIPPLY3-201ENST00000329553 IFI27L1Q96BM0 104 aa15.04■□□□□ -0
RIPPLY3-201ENST00000329553 KNCNA6PVL3 124 aa15.03■□□□□ -0
RIPPLY3-201ENST00000329553 CACNG7P62955 275 aa15.03■□□□□ -0
RIPPLY3-201ENST00000329553 LEPP41159 167 aa15.02■□□□□ -0
RIPPLY3-201ENST00000329553 ZNF256Q9Y2P7 627 aaPredicted RBP15.02■□□□□ -0
RIPPLY3-201ENST00000329553 SPAG8Q99932 426 aaPredicted RBP15.02□□□□□ -0.01
RIPPLY3-201ENST00000329553 MAP1LC3AQ9H492 121 aa15.02□□□□□ -0.01
RIPPLY3-201ENST00000329553 C2CD3Q4AC94 2353 aa15.02□□□□□ -0.01
RIPPLY3-201ENST00000329553 TRAV12-3A0A0B4J271 114 aa15.01□□□□□ -0.01
RIPPLY3-201ENST00000329553 GAS8-AS1O95177 125 aa15.01□□□□□ -0.01
RIPPLY3-201ENST00000329553 AMTNQ6UX39 209 aa15.01□□□□□ -0.01
RIPPLY3-201ENST00000329553 TRAV12-2A0A075B6T6 113 aa15.01□□□□□ -0.01
RIPPLY3-201ENST00000329553 TRAV25A0A0B4J276 109 aa15.01□□□□□ -0.01
RIPPLY3-201ENST00000329553 H3BVH4 76 aa15.01□□□□□ -0.01
RIPPLY3-201ENST00000329553 GNRH2O43555 120 aa15.01□□□□□ -0.01
RIPPLY3-201ENST00000329553 SNAI2O43623 268 aa15.01□□□□□ -0.01
RIPPLY3-201ENST00000329553 MAP6D1Q9H9H5 199 aa15.01□□□□□ -0.01
RIPPLY3-201ENST00000329553 C7orf71A4D174 169 aa15□□□□□ -0.01
RIPPLY3-201ENST00000329553 SPINK13Q1W4C9 94 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms