RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 RAB4BP61018 213 aa13.15□□□□□ -0.3
SYNE4-201ENST00000324444 ZNF415Q09FC8 603 aa13.15□□□□□ -0.3
SYNE4-201ENST00000324444 SYT8Q8NBV8 401 aa13.15□□□□□ -0.3
SYNE4-201ENST00000324444 SNURFLB1AK76 121 aa13.14□□□□□ -0.31
SYNE4-201ENST00000324444 H3BVH4 76 aa13.14□□□□□ -0.31
SYNE4-201ENST00000324444 GNRH2O43555 120 aa13.14□□□□□ -0.31
SYNE4-201ENST00000324444 TWIST1Q15672 202 aa13.14□□□□□ -0.31
SYNE4-201ENST00000324444 Q6ZQT7 251 aa13.14□□□□□ -0.31
SYNE4-201ENST00000324444 ZNF575Q86XF7 245 aa13.14□□□□□ -0.31
SYNE4-201ENST00000324444 ZFP82Q8N141 532 aa13.14□□□□□ -0.31
SYNE4-201ENST00000324444 SCRT2Q9NQ03 307 aa13.14□□□□□ -0.31
SYNE4-201ENST00000324444 DNAH9Q9NYC9 4486 aa13.13□□□□□ -0.31
SYNE4-201ENST00000324444 IGHV3-16A0A0C4DH30 117 aa13.13□□□□□ -0.31
SYNE4-201ENST00000324444 TRGC1P0CF51 173 aa13.13□□□□□ -0.31
SYNE4-201ENST00000324444 NTF3P20783 257 aa13.13□□□□□ -0.31
SYNE4-201ENST00000324444 CAMPP49913 170 aa13.13□□□□□ -0.31
SYNE4-201ENST00000324444 RAB5BP61020 215 aa13.13□□□□□ -0.31
SYNE4-201ENST00000324444 GATD1Q8NB37 220 aa13.13□□□□□ -0.31
SYNE4-201ENST00000324444 FRZBQ92765 325 aa13.13□□□□□ -0.31
SYNE4-201ENST00000324444 SPXQ9BT56 116 aa13.13□□□□□ -0.31
SYNE4-201ENST00000324444 RBMY1A1P0DJD3 496 aaKnown RBP13.12□□□□□ -0.31
SYNE4-201ENST00000324444 RBMY1CP0DJD4 496 aa13.12□□□□□ -0.31
SYNE4-201ENST00000324444 RBMY1FQ15415 496 aaKnown RBP13.12□□□□□ -0.31
SYNE4-201ENST00000324444 ZNF493Q6ZR52 646 aa13.12□□□□□ -0.31
SYNE4-201ENST00000324444 TMEM136Q6ZRR5 245 aa13.12□□□□□ -0.31
SYNE4-201ENST00000324444 C1orf158Q8N1D5 194 aa13.12□□□□□ -0.31
SYNE4-201ENST00000324444 NDUFAF3Q9BU61 184 aa13.12□□□□□ -0.31
SYNE4-201ENST00000324444 SMIM9A6NGZ8 99 aa13.11□□□□□ -0.31
SYNE4-201ENST00000324444 GIG44P09565 113 aaPredicted RBP13.11□□□□□ -0.31
SYNE4-201ENST00000324444 IGHV4-30-4P0DP06 118 aa13.11□□□□□ -0.31
SYNE4-201ENST00000324444 RNASE3P12724 160 aaKnown RBP13.11□□□□□ -0.31
SYNE4-201ENST00000324444 PIK3CD-AS1Q5SR53 167 aa13.11□□□□□ -0.31
SYNE4-201ENST00000324444 PTH2Q96A98 100 aa13.11□□□□□ -0.31
SYNE4-201ENST00000324444 C9orf85Q96MD7 179 aa13.11□□□□□ -0.31
SYNE4-201ENST00000324444 B9D2Q9BPU9 175 aa13.11□□□□□ -0.31
SYNE4-201ENST00000324444 APCSP02743 223 aa13.1□□□□□ -0.31
SYNE4-201ENST00000324444 TRGC2P03986 189 aa13.1□□□□□ -0.31
SYNE4-201ENST00000324444 HTN1P15515 57 aa13.1□□□□□ -0.31
SYNE4-201ENST00000324444 ZNF705AQ6ZN79 300 aaPredicted RBP13.1□□□□□ -0.31
SYNE4-201ENST00000324444 CSNK1G2-AS1Q8NCQ2 148 aa13.1□□□□□ -0.31
SYNE4-201ENST00000324444 TMEM191AQ9H0A3 160 aa13.1□□□□□ -0.31
SYNE4-201ENST00000324444 MRPL18Q9H0U6 180 aaKnown RBP13.1□□□□□ -0.31
SYNE4-201ENST00000324444 TIMM8BQ9Y5J9 83 aaPredicted RBP13.1□□□□□ -0.31
SYNE4-201ENST00000324444 IGHV3OR16-12A0A075B7B8 117 aa13.09□□□□□ -0.31
SYNE4-201ENST00000324444 FABP9Q0Z7S8 132 aa13.09□□□□□ -0.31
SYNE4-201ENST00000324444 RRN3P1Q2M238 152 aa13.09□□□□□ -0.31
SYNE4-201ENST00000324444 OR10AG1Q8NH19 301 aa13.09□□□□□ -0.31
SYNE4-201ENST00000324444 TMEM263Q8WUH6 116 aaKnown RBP13.09□□□□□ -0.31
SYNE4-201ENST00000324444 C16orf74Q96GX8 76 aa13.09□□□□□ -0.31
SYNE4-201ENST00000324444 NXPH4O95158 308 aa13.08□□□□□ -0.31
SYNE4-201ENST00000324444 AP1S3Q96PC3 154 aa13.08□□□□□ -0.31
SYNE4-201ENST00000324444 M0R381 172 aa13.07□□□□□ -0.32
SYNE4-201ENST00000324444 Q6ZWC4 215 aa13.07□□□□□ -0.32
SYNE4-201ENST00000324444 RCHY1Q96PM5 261 aa13.07□□□□□ -0.32
SYNE4-201ENST00000324444 MDFICQ9P1T7 246 aa13.07□□□□□ -0.32
SYNE4-201ENST00000324444 M0R2P5 195 aa13.07□□□□□ -0.32
SYNE4-201ENST00000324444 SMIM17P0DL12 118 aa13.07□□□□□ -0.32
SYNE4-201ENST00000324444 DMRTA1Q5VZB9 504 aa13.06□□□□□ -0.32
SYNE4-201ENST00000324444 MUC21A0A0G2JKD1 596 aa13.05□□□□□ -0.32
SYNE4-201ENST00000324444 MUC21A0A140T8X8 626 aa13.05□□□□□ -0.32
SYNE4-201ENST00000324444 PPBPP02775 128 aa13.05□□□□□ -0.32
SYNE4-201ENST00000324444 SSTP61278 116 aa13.05□□□□□ -0.32
SYNE4-201ENST00000324444 ZNF876PQ49A33 203 aa13.05□□□□□ -0.32
SYNE4-201ENST00000324444 FAM104BQ5XKR9 115 aa13.05□□□□□ -0.32
SYNE4-201ENST00000324444 RNASE8Q8TDE3 154 aaKnown RBP13.05□□□□□ -0.32
SYNE4-201ENST00000324444 TENM3Q9P273 2699 aa13.04□□□□□ -0.32
SYNE4-201ENST00000324444 DAZ2Q13117 558 aaKnown RBP13.04□□□□□ -0.32
SYNE4-201ENST00000324444 LGALS9BQ3B8N2 356 aa13.04□□□□□ -0.32
SYNE4-201ENST00000324444 C11orf72Q8NBR9 251 aa13.04□□□□□ -0.32
SYNE4-201ENST00000324444 DPH3P1Q9H4G8 78 aa13.04□□□□□ -0.32
SYNE4-201ENST00000324444 GSN-AS1Q9NRJ2 163 aa13.04□□□□□ -0.32
SYNE4-201ENST00000324444 TP53TG1Q9Y2A0 90 aa13.04□□□□□ -0.32
SYNE4-201ENST00000324444 A8MWV9 139 aa13.03□□□□□ -0.32
SYNE4-201ENST00000324444 FRMD6-AS1P0C7T7 363 aa13.03□□□□□ -0.32
SYNE4-201ENST00000324444 NHLRC4P0CG21 123 aaPredicted RBP13.03□□□□□ -0.32
SYNE4-201ENST00000324444 SLAQ13239 276 aa13.02□□□□□ -0.33
SYNE4-201ENST00000324444 MSRB1Q9NZV6 116 aa13.02□□□□□ -0.33
SYNE4-201ENST00000324444 PHOX2AO14813 284 aa13.01□□□□□ -0.33
SYNE4-201ENST00000324444 CIDEAO60543 219 aa13.01□□□□□ -0.33
SYNE4-201ENST00000324444 S100A6P06703 90 aa13.01□□□□□ -0.33
SYNE4-201ENST00000324444 RNF183Q96D59 192 aa13.01□□□□□ -0.33
SYNE4-201ENST00000324444 LAMTOR2Q9Y2Q5 125 aa13.01□□□□□ -0.33
SYNE4-201ENST00000324444 TMA7Q9Y2S6 64 aaKnown RBP13.01□□□□□ -0.33
SYNE4-201ENST00000324444 PPP1R17O96001 155 aa13□□□□□ -0.33
SYNE4-201ENST00000324444 MIFP14174 115 aa13□□□□□ -0.33
SYNE4-201ENST00000324444 AZU1P20160 251 aa13□□□□□ -0.33
SYNE4-201ENST00000324444 EVI2AP22794 236 aa13□□□□□ -0.33
SYNE4-201ENST00000324444 AMN1Q8IY45 258 aa13□□□□□ -0.33
SYNE4-201ENST00000324444 ORMDL3Q8N138 153 aa13□□□□□ -0.33
SYNE4-201ENST00000324444 IL17DQ8TAD2 202 aa13□□□□□ -0.33
SYNE4-201ENST00000324444 RASL10AQ92737 203 aa13□□□□□ -0.33
SYNE4-201ENST00000324444 MRAP2Q96G30 205 aa13□□□□□ -0.33
SYNE4-201ENST00000324444 STAB2Q8WWQ8 2551 aa12.99□□□□□ -0.33
SYNE4-201ENST00000324444 RHODO00212 210 aa12.99□□□□□ -0.33
SYNE4-201ENST00000324444 SPRY2O43597 315 aa12.99□□□□□ -0.33
SYNE4-201ENST00000324444 HIST1H2BKO60814 126 aa12.99□□□□□ -0.33
SYNE4-201ENST00000324444 HIST1H2BJP06899 126 aa12.99□□□□□ -0.33
SYNE4-201ENST00000324444 RAB4AP20338 218 aa12.99□□□□□ -0.33
SYNE4-201ENST00000324444 HIST1H2BOP23527 126 aa12.99□□□□□ -0.33
SYNE4-201ENST00000324444 CKS2P33552 79 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms