RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 SCGB1A1P11684 91 aa12.83□□□□□ -0.36
CLIP4-201ENST00000320081 OR5A1Q8NGJ0 315 aa12.83□□□□□ -0.36
CLIP4-201ENST00000320081 IGLV11-55A0A075B6I3 123 aa12.82□□□□□ -0.36
CLIP4-201ENST00000320081 BVES-AS1Q5T3Y7 98 aa12.82□□□□□ -0.36
CLIP4-201ENST00000320081 LINC01356Q8N9X3 169 aa12.82□□□□□ -0.36
CLIP4-201ENST00000320081 C10orf142B7Z368 130 aa12.82□□□□□ -0.36
CLIP4-201ENST00000320081 PRADC1Q9BSG0 188 aa12.82□□□□□ -0.36
CLIP4-201ENST00000320081 ERG28Q9UKR5 140 aa12.82□□□□□ -0.36
CLIP4-201ENST00000320081 OCIAD2Q56VL3 154 aa12.82□□□□□ -0.36
CLIP4-201ENST00000320081 SAMD13Q5VXD3 122 aa12.82□□□□□ -0.36
CLIP4-201ENST00000320081 GAGE12JA6NER3 117 aa12.82□□□□□ -0.36
CLIP4-201ENST00000320081 LINC01549A6NIU2 74 aa12.82□□□□□ -0.36
CLIP4-201ENST00000320081 LINC00158P58513 81 aa12.82□□□□□ -0.36
CLIP4-201ENST00000320081 GAGE4Q13068 117 aa12.82□□□□□ -0.36
CLIP4-201ENST00000320081 GAGE5Q13069 117 aa12.82□□□□□ -0.36
CLIP4-201ENST00000320081 GDF5OSQ5U4N7 250 aa12.82□□□□□ -0.36
CLIP4-201ENST00000320081 SMPXQ9UHP9 88 aa12.82□□□□□ -0.36
CLIP4-201ENST00000320081 COL6A3P12111 3177 aa12.82□□□□□ -0.36
CLIP4-201ENST00000320081 OR11H6Q8NGC7 330 aa12.81□□□□□ -0.36
CLIP4-201ENST00000320081 FANCD2OSQ96PS1 177 aa12.81□□□□□ -0.36
CLIP4-201ENST00000320081 SMIM2Q9BVW6 85 aa12.81□□□□□ -0.36
CLIP4-201ENST00000320081 A0A096LPF7 62 aa12.81□□□□□ -0.36
CLIP4-201ENST00000320081 COX8AP10176 69 aa12.81□□□□□ -0.36
CLIP4-201ENST00000320081 TSPAN13O95857 204 aa12.81□□□□□ -0.36
CLIP4-201ENST00000320081 UNQ9165/PRO28630Q6UXU0 137 aa12.81□□□□□ -0.36
CLIP4-201ENST00000320081 ADAMTSL5Q6ZMM2 481 aa12.81□□□□□ -0.36
CLIP4-201ENST00000320081 MRPL52Q86TS9 123 aaKnown RBP12.81□□□□□ -0.36
CLIP4-201ENST00000320081 H3BMG7 143 aa12.8□□□□□ -0.36
CLIP4-201ENST00000320081 VWC2LB2RUY7 222 aa12.8□□□□□ -0.36
CLIP4-201ENST00000320081 BUB3O43684 328 aa12.8□□□□□ -0.36
CLIP4-201ENST00000320081 AJUBAQ96IF1 538 aa12.8□□□□□ -0.36
CLIP4-201ENST00000320081 Q8N8P6 123 aa12.8□□□□□ -0.36
CLIP4-201ENST00000320081 IGLV2-8P01709 118 aa12.79□□□□□ -0.36
CLIP4-201ENST00000320081 APRG1Q8IVJ8 170 aa12.79□□□□□ -0.36
CLIP4-201ENST00000320081 HECTD1Q9ULT8 2610 aa12.79□□□□□ -0.36
CLIP4-201ENST00000320081 A8MWV9 139 aa12.78□□□□□ -0.36
CLIP4-201ENST00000320081 JPT2Q9H910 190 aa12.78□□□□□ -0.36
CLIP4-201ENST00000320081 NBEAQ8NFP9 2946 aa12.78□□□□□ -0.36
CLIP4-201ENST00000320081 ZNF80P51504 273 aaPredicted RBP12.78□□□□□ -0.36
CLIP4-201ENST00000320081 RPL36AP83881 106 aaKnown RBP12.78□□□□□ -0.36
CLIP4-201ENST00000320081 RPL36ALQ969Q0 106 aaKnown RBP12.78□□□□□ -0.36
CLIP4-201ENST00000320081 NDUFA4O00483 81 aa12.77□□□□□ -0.36
CLIP4-201ENST00000320081 C9JAW5 83 aa12.77□□□□□ -0.37
CLIP4-201ENST00000320081 HLA-DRB4P13762 266 aa12.77□□□□□ -0.37
CLIP4-201ENST00000320081 CDKN1BP46527 198 aa12.77□□□□□ -0.37
CLIP4-201ENST00000320081 HLA-DRB4X5D2U9 266 aa12.77□□□□□ -0.37
CLIP4-201ENST00000320081 DSPP15924 2871 aaKnown RBP12.77□□□□□ -0.37
CLIP4-201ENST00000320081 ANKRD17O75179 2603 aaKnown RBP12.77□□□□□ -0.37
CLIP4-201ENST00000320081 PRIMA1Q86XR5 153 aa12.77□□□□□ -0.37
CLIP4-201ENST00000320081 ZNRF2Q8NHG8 242 aa12.77□□□□□ -0.37
CLIP4-201ENST00000320081 GAGE7O76087 117 aa12.76□□□□□ -0.37
CLIP4-201ENST00000320081 GAGE12FP0CL80 117 aa12.76□□□□□ -0.37
CLIP4-201ENST00000320081 GAGE12GP0CL81 117 aa12.76□□□□□ -0.37
CLIP4-201ENST00000320081 GAGE12IP0CL82 117 aa12.76□□□□□ -0.37
CLIP4-201ENST00000320081 CDSNQ15517 529 aa12.76□□□□□ -0.37
CLIP4-201ENST00000320081 IGHV1OR15-1A0A075B7D0 117 aa12.76□□□□□ -0.37
CLIP4-201ENST00000320081 M0R2P5 195 aa12.76□□□□□ -0.37
CLIP4-201ENST00000320081 A0A087WX48 190 aa12.76□□□□□ -0.37
CLIP4-201ENST00000320081 TRAV8-3A0A0A6YYJ7 113 aa12.76□□□□□ -0.37
CLIP4-201ENST00000320081 IGHV7-4-1A0A0J9YVY3 117 aa12.76□□□□□ -0.37
CLIP4-201ENST00000320081 TIMM21Q9BVV7 248 aa12.76□□□□□ -0.37
CLIP4-201ENST00000320081 PRSS29PA6NIE9 313 aa12.76□□□□□ -0.37
CLIP4-201ENST00000320081 PAX4O43316 350 aa12.76□□□□□ -0.37
CLIP4-201ENST00000320081 SLURP1P55000 103 aa12.76□□□□□ -0.37
CLIP4-201ENST00000320081 EIF4EBP1Q13541 118 aaPredicted RBP12.76□□□□□ -0.37
CLIP4-201ENST00000320081 C19orf84I3L1E1 186 aa12.75□□□□□ -0.37
CLIP4-201ENST00000320081 LGALS9BQ3B8N2 356 aa12.75□□□□□ -0.37
CLIP4-201ENST00000320081 LGALS9CQ6DKI2 356 aa12.75□□□□□ -0.37
CLIP4-201ENST00000320081 RNF114Q9Y508 228 aa12.75□□□□□ -0.37
CLIP4-201ENST00000320081 IGF1P05019 195 aa12.75□□□□□ -0.37
CLIP4-201ENST00000320081 DPH3Q96FX2 82 aa12.75□□□□□ -0.37
CLIP4-201ENST00000320081 K7EP13 123 aa12.74□□□□□ -0.37
CLIP4-201ENST00000320081 HOXD3P31249 432 aaPredicted RBP12.74□□□□□ -0.37
CLIP4-201ENST00000320081 RPL39P62891 51 aaKnown RBP12.74□□□□□ -0.37
CLIP4-201ENST00000320081 SIGMAR1Q99720 223 aa12.74□□□□□ -0.37
CLIP4-201ENST00000320081 F8VRH5 84 aa12.74□□□□□ -0.37
CLIP4-201ENST00000320081 MALP21145 153 aa12.74□□□□□ -0.37
CLIP4-201ENST00000320081 CLPSL2Q6UWE3 100 aa12.74□□□□□ -0.37
CLIP4-201ENST00000320081 GATD1Q8NB37 220 aa12.74□□□□□ -0.37
CLIP4-201ENST00000320081 TP53TG3Q9ULZ0 132 aa12.74□□□□□ -0.37
CLIP4-201ENST00000320081 PFN2P35080 140 aa12.73□□□□□ -0.37
CLIP4-201ENST00000320081 TMEM238C9JI98 176 aa12.73□□□□□ -0.37
CLIP4-201ENST00000320081 INSP01308 110 aa12.73□□□□□ -0.37
CLIP4-201ENST00000320081 C8orf31Q8N9H6 132 aa12.73□□□□□ -0.37
CLIP4-201ENST00000320081 USP34Q70CQ2 3546 aa12.72□□□□□ -0.37
CLIP4-201ENST00000320081 DSCR9P59020 149 aa12.72□□□□□ -0.37
CLIP4-201ENST00000320081 LY6G5BQ8NDX9 201 aa12.72□□□□□ -0.37
CLIP4-201ENST00000320081 DLX4Q92988 240 aaPredicted RBP12.71□□□□□ -0.37
CLIP4-201ENST00000320081 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.71□□□□□ -0.37
CLIP4-201ENST00000320081 IGKV2-29A2NJV5 120 aaPredicted RBP12.71□□□□□ -0.37
CLIP4-201ENST00000320081 KLF5Q13887 457 aaPredicted RBP12.71□□□□□ -0.37
CLIP4-201ENST00000320081 PMVKQ15126 192 aa12.71□□□□□ -0.37
CLIP4-201ENST00000320081 TRBV25-1A0A075B6N4 114 aa12.71□□□□□ -0.38
CLIP4-201ENST00000320081 C9orf118A6NHY6 69 aa12.71□□□□□ -0.38
CLIP4-201ENST00000320081 CFAP161Q6P656 301 aa12.71□□□□□ -0.38
CLIP4-201ENST00000320081 CRYGCP07315 174 aa12.71□□□□□ -0.38
CLIP4-201ENST00000320081 SH2D6Q7Z4S9 175 aa12.71□□□□□ -0.38
CLIP4-201ENST00000320081 KLF12Q9Y4X4 402 aa12.71□□□□□ -0.38
CLIP4-201ENST00000320081 MAST4O15021 2626 aa12.7□□□□□ -0.38
CLIP4-201ENST00000320081 NDUFS8O00217 210 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms