RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 TRIOO75962 3097 aa6.56□□□□□ -1.36
PDLIM5-201ENST00000317968 MRGPRG-AS1Q2M3A8 158 aa6.56□□□□□ -1.36
PDLIM5-201ENST00000317968 Q8TAT8 98 aa6.56□□□□□ -1.36
PDLIM5-201ENST00000317968 DSCAML1Q8TD84 2053 aa6.56□□□□□ -1.36
PDLIM5-201ENST00000317968 DNAJC30Q96LL9 226 aa6.55□□□□□ -1.36
PDLIM5-201ENST00000317968 DNLZQ5SXM8 178 aa6.55□□□□□ -1.36
PDLIM5-201ENST00000317968 ARMS2P0C7Q2 107 aa6.55□□□□□ -1.36
PDLIM5-201ENST00000317968 MRPL16Q9NX20 251 aaKnown RBP6.55□□□□□ -1.36
PDLIM5-201ENST00000317968 PGPEP1LA6NFU8 196 aa6.55□□□□□ -1.36
PDLIM5-201ENST00000317968 HBDP02042 147 aa6.55□□□□□ -1.36
PDLIM5-201ENST00000317968 DEFB135Q30KP9 77 aa6.55□□□□□ -1.36
PDLIM5-201ENST00000317968 C9orf47Q6ZRZ4 202 aa6.55□□□□□ -1.36
PDLIM5-201ENST00000317968 NFE4Q86UQ8 179 aa6.55□□□□□ -1.36
PDLIM5-201ENST00000317968 ZNF503Q96F45 646 aa6.55□□□□□ -1.36
PDLIM5-201ENST00000317968 V9GYV3 84 aa6.55□□□□□ -1.36
PDLIM5-201ENST00000317968 IGFL4Q6B9Z1 124 aa6.55□□□□□ -1.36
PDLIM5-201ENST00000317968 APRG1Q8IVJ8 170 aa6.55□□□□□ -1.36
PDLIM5-201ENST00000317968 C8orf49Q96NF6 230 aa6.55□□□□□ -1.36
PDLIM5-201ENST00000317968 CHTOPQ9Y3Y2 248 aaKnown RBP6.55□□□□□ -1.36
PDLIM5-201ENST00000317968 ANGP03950 147 aaKnown RBP6.54□□□□□ -1.36
PDLIM5-201ENST00000317968 NHLRC4P0CG21 123 aaPredicted RBP6.54□□□□□ -1.36
PDLIM5-201ENST00000317968 LYZL1Q6UWQ5 148 aa6.54□□□□□ -1.36
PDLIM5-201ENST00000317968 Q8N2B8 174 aa6.54□□□□□ -1.36
PDLIM5-201ENST00000317968 ZNRF2Q8NHG8 242 aa6.54□□□□□ -1.36
PDLIM5-201ENST00000317968 U3KQE9 123 aa6.54□□□□□ -1.36
PDLIM5-201ENST00000317968 IGKV3D-20A0A0C4DH25 116 aa6.54□□□□□ -1.36
PDLIM5-201ENST00000317968 C14orf178Q8N769 122 aaPredicted RBP6.54□□□□□ -1.36
PDLIM5-201ENST00000317968 C16orf95Q9H693 158 aa6.54□□□□□ -1.36
PDLIM5-201ENST00000317968 TRAV10A0A0B4J240 114 aa6.54□□□□□ -1.36
PDLIM5-201ENST00000317968 A0A0J9YY99 117 aa6.54□□□□□ -1.36
PDLIM5-201ENST00000317968 SMIM27A0A1W2PRY6 76 aa6.54□□□□□ -1.36
PDLIM5-201ENST00000317968 LYRM9A8MSI8 78 aa6.54□□□□□ -1.36
PDLIM5-201ENST00000317968 ZNF747Q9BV97 191 aa6.54□□□□□ -1.36
PDLIM5-201ENST00000317968 MED14OSP0DP75 135 aa6.54□□□□□ -1.36
PDLIM5-201ENST00000317968 PLNP26678 52 aa6.54□□□□□ -1.36
PDLIM5-201ENST00000317968 OR10D4PQ8NGN7 298 aa6.54□□□□□ -1.36
PDLIM5-201ENST00000317968 TRAV12-2A0A075B6T6 113 aa6.53□□□□□ -1.36
PDLIM5-201ENST00000317968 NUPR2A6NF83 97 aa6.53□□□□□ -1.36
PDLIM5-201ENST00000317968 MIFP14174 115 aa6.53□□□□□ -1.36
PDLIM5-201ENST00000317968 LINC01006Q8NI28 216 aa6.53□□□□□ -1.36
PDLIM5-201ENST00000317968 A0A087WWL8 130 aa6.53□□□□□ -1.36
PDLIM5-201ENST00000317968 LINC01548A6NM66 108 aa6.53□□□□□ -1.36
PDLIM5-201ENST00000317968 GTF2H5Q6ZYL4 71 aa6.53□□□□□ -1.36
PDLIM5-201ENST00000317968 TRAV8-1A0A0A6YYK1 113 aa6.53□□□□□ -1.36
PDLIM5-201ENST00000317968 PRRC2AP48634 2157 aaKnown RBP6.53□□□□□ -1.36
PDLIM5-201ENST00000317968 MORN5Q5VZ52 161 aa6.53□□□□□ -1.36
PDLIM5-201ENST00000317968 PRUNE2Q8WUY3 3088 aa6.53□□□□□ -1.36
PDLIM5-201ENST00000317968 ANXA2RQ3ZCQ2 193 aa6.53□□□□□ -1.36
PDLIM5-201ENST00000317968 NUP35Q8NFH5 326 aa6.53□□□□□ -1.36
PDLIM5-201ENST00000317968 CHCHD1Q96BP2 118 aaKnown RBP6.53□□□□□ -1.36
PDLIM5-201ENST00000317968 ARHGAP32A7KAX9 2087 aa6.53□□□□□ -1.36
PDLIM5-201ENST00000317968 FASNP49327 2511 aaKnown RBP6.53□□□□□ -1.36
PDLIM5-201ENST00000317968 A0A096LNT2 108 aa6.53□□□□□ -1.36
PDLIM5-201ENST00000317968 ATP6V0E2Q8NHE4 81 aa6.53□□□□□ -1.36
PDLIM5-201ENST00000317968 AGPAT4-IT1Q9H0P7 198 aa6.53□□□□□ -1.36
PDLIM5-201ENST00000317968 USP24Q9UPU5 2620 aa6.52□□□□□ -1.37
PDLIM5-201ENST00000317968 Q0VG73 95 aa6.52□□□□□ -1.37
PDLIM5-201ENST00000317968 NEGR1Q7Z3B1 354 aa6.52□□□□□ -1.37
PDLIM5-201ENST00000317968 TMEM141Q96I45 108 aa6.52□□□□□ -1.37
PDLIM5-201ENST00000317968 PGPEP1Q9NXJ5 209 aa6.52□□□□□ -1.37
PDLIM5-201ENST00000317968 H7C2G1 150 aa6.52□□□□□ -1.37
PDLIM5-201ENST00000317968 C18orf15Q96N68 181 aa6.52□□□□□ -1.37
PDLIM5-201ENST00000317968 DMRT1Q9Y5R6 373 aa6.52□□□□□ -1.37
PDLIM5-201ENST00000317968 MYMXA0A1B0GTQ4 84 aa6.52□□□□□ -1.37
PDLIM5-201ENST00000317968 UBE2BP63146 152 aa6.52□□□□□ -1.37
PDLIM5-201ENST00000317968 KLF5Q13887 457 aaPredicted RBP6.52□□□□□ -1.37
PDLIM5-201ENST00000317968 LINC00479Q96M42 142 aa6.52□□□□□ -1.37
PDLIM5-201ENST00000317968 C11orf68Q9H3H3 251 aaKnown RBP6.52□□□□□ -1.37
PDLIM5-201ENST00000317968 PLXNB1O43157 2135 aa6.52□□□□□ -1.37
PDLIM5-201ENST00000317968 IGHV3-16A0A0C4DH30 117 aa6.52□□□□□ -1.37
PDLIM5-201ENST00000317968 DPM2O94777 84 aa6.52□□□□□ -1.37
PDLIM5-201ENST00000317968 GAGE6Q13070 117 aa6.52□□□□□ -1.37
PDLIM5-201ENST00000317968 SFTA2Q6UW10 78 aa6.52□□□□□ -1.37
PDLIM5-201ENST00000317968 PRRC2CQ9Y520 2896 aaKnown RBP6.52□□□□□ -1.37
PDLIM5-201ENST00000317968 GYPEP15421 78 aa6.51□□□□□ -1.37
PDLIM5-201ENST00000317968 MYO9AB2RTY4 2548 aa6.51□□□□□ -1.37
PDLIM5-201ENST00000317968 FOXA3P55318 350 aaPredicted RBP6.51□□□□□ -1.37
PDLIM5-201ENST00000317968 TRAV13-1A0A0B4J241 112 aa6.51□□□□□ -1.37
PDLIM5-201ENST00000317968 NIT2Q9NQR4 276 aa6.51□□□□□ -1.37
PDLIM5-201ENST00000317968 K7EQD1 137 aa6.51□□□□□ -1.37
PDLIM5-201ENST00000317968 RPL24P83731 157 aaKnown RBP6.51□□□□□ -1.37
PDLIM5-201ENST00000317968 OVOL2Q9BRP0 275 aa6.51□□□□□ -1.37
PDLIM5-201ENST00000317968 HIST1H2BKO60814 126 aa6.51□□□□□ -1.37
PDLIM5-201ENST00000317968 HIST1H2BJP06899 126 aa6.51□□□□□ -1.37
PDLIM5-201ENST00000317968 HIST1H2BOP23527 126 aa6.51□□□□□ -1.37
PDLIM5-201ENST00000317968 HIST1H2BBP33778 126 aa6.51□□□□□ -1.37
PDLIM5-201ENST00000317968 HIST1H2BDP58876 126 aa6.51□□□□□ -1.37
PDLIM5-201ENST00000317968 HIST1H2BCP62807 126 aa6.51□□□□□ -1.37
PDLIM5-201ENST00000317968 HIST2H2BEQ16778 126 aa6.51□□□□□ -1.37
PDLIM5-201ENST00000317968 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.51□□□□□ -1.37
PDLIM5-201ENST00000317968 HIST1H2BHQ93079 126 aa6.51□□□□□ -1.37
PDLIM5-201ENST00000317968 HIST1H2BNQ99877 126 aa6.51□□□□□ -1.37
PDLIM5-201ENST00000317968 HIST1H2BMQ99879 126 aa6.51□□□□□ -1.37
PDLIM5-201ENST00000317968 Q9HAA7 133 aa6.51□□□□□ -1.37
PDLIM5-201ENST00000317968 GSN-AS1Q9NRJ2 163 aa6.51□□□□□ -1.37
PDLIM5-201ENST00000317968 KIR2DL5BA0A0G2JN68 375 aa6.5□□□□□ -1.37
PDLIM5-201ENST00000317968 KIR2DL5BA0A0G2JPC4 375 aa6.5□□□□□ -1.37
PDLIM5-201ENST00000317968 KIR2DL5AQ8N109 375 aa6.5□□□□□ -1.37
PDLIM5-201ENST00000317968 DEFB125Q8N687 156 aa6.5□□□□□ -1.37
PDLIM5-201ENST00000317968 KIR2DL5BQ8NHK3 375 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms