RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 TRAV12-3A0A0B4J271 114 aa11.05□□□□□ -0.64
CLK4-201ENST00000316308 Q8N8P6 123 aa11.05□□□□□ -0.64
CLK4-201ENST00000316308 RASL10AQ92737 203 aa11.05□□□□□ -0.64
CLK4-201ENST00000316308 MS4A6AQ9H2W1 248 aa11.05□□□□□ -0.64
CLK4-201ENST00000316308 LINC01546A6NGU7 62 aa11.05□□□□□ -0.64
CLK4-201ENST00000316308 CCL25O15444 150 aa11.05□□□□□ -0.64
CLK4-201ENST00000316308 SMIM17P0DL12 118 aa11.05□□□□□ -0.64
CLK4-201ENST00000316308 NMUP48645 174 aa11.05□□□□□ -0.64
CLK4-201ENST00000316308 ODF1Q14990 250 aa11.05□□□□□ -0.64
CLK4-201ENST00000316308 PSMG4Q5JS54 123 aa11.05□□□□□ -0.64
CLK4-201ENST00000316308 PRSS1P07477 247 aa11.04□□□□□ -0.64
CLK4-201ENST00000316308 FOXC2Q99958 501 aa11.04□□□□□ -0.64
CLK4-201ENST00000316308 PHLDA3Q9Y5J5 127 aa11.04□□□□□ -0.64
CLK4-201ENST00000316308 COX11Q9Y6N1 276 aa11.04□□□□□ -0.64
CLK4-201ENST00000316308 NOTCH3Q9UM47 2321 aa11.04□□□□□ -0.64
CLK4-201ENST00000316308 MGPP08493 103 aa11.04□□□□□ -0.64
CLK4-201ENST00000316308 GATA3P23771 443 aa11.04□□□□□ -0.64
CLK4-201ENST00000316308 DSCR9P59020 149 aa11.04□□□□□ -0.64
CLK4-201ENST00000316308 ZNF702PQ9H963 129 aa11.04□□□□□ -0.64
CLK4-201ENST00000316308 NXT2Q9NPJ8 142 aaKnown RBP11.04□□□□□ -0.64
CLK4-201ENST00000316308 HHLA3Q9XRX5 114 aa11.04□□□□□ -0.64
CLK4-201ENST00000316308 LENEPQ9Y5L5 61 aa11.04□□□□□ -0.64
CLK4-201ENST00000316308 TAX1BP3O14907 124 aa11.03□□□□□ -0.64
CLK4-201ENST00000316308 ASIPP42127 132 aa11.03□□□□□ -0.64
CLK4-201ENST00000316308 HELZ2Q9BYK8 2649 aaKnown RBP11.02□□□□□ -0.64
CLK4-201ENST00000316308 C7orf71A4D174 169 aa11.02□□□□□ -0.65
CLK4-201ENST00000316308 CBY3A6NI87 242 aa11.02□□□□□ -0.65
CLK4-201ENST00000316308 PRM2P04554 102 aa11.02□□□□□ -0.65
CLK4-201ENST00000316308 Q5PR19 223 aa11.02□□□□□ -0.65
CLK4-201ENST00000316308 ADAMTSL5Q6ZMM2 481 aa11.02□□□□□ -0.65
CLK4-201ENST00000316308 SMIM15Q7Z3B0 74 aa11.02□□□□□ -0.65
CLK4-201ENST00000316308 VPREB3Q9UKI3 123 aa11.02□□□□□ -0.65
CLK4-201ENST00000316308 GAGE1Q13065 139 aa11.02□□□□□ -0.65
CLK4-201ENST00000316308 DPF1Q92782 380 aa11.02□□□□□ -0.65
CLK4-201ENST00000316308 JMJD1CQ15652 2540 aa11.01□□□□□ -0.65
CLK4-201ENST00000316308 A0A087WWL8 130 aa11.01□□□□□ -0.65
CLK4-201ENST00000316308 KLLNB2CW77 178 aa11.01□□□□□ -0.65
CLK4-201ENST00000316308 K7EP13 123 aa11.01□□□□□ -0.65
CLK4-201ENST00000316308 Q6YL49 198 aa11.01□□□□□ -0.65
CLK4-201ENST00000316308 GTSCR1Q86UQ5 136 aa11.01□□□□□ -0.65
CLK4-201ENST00000316308 APRG1Q8IVJ8 170 aa11.01□□□□□ -0.65
CLK4-201ENST00000316308 FSHBP01225 129 aa11.01□□□□□ -0.65
CLK4-201ENST00000316308 HOXD3P31249 432 aaPredicted RBP11.01□□□□□ -0.65
CLK4-201ENST00000316308 LAGE3Q14657 143 aa11.01□□□□□ -0.65
CLK4-201ENST00000316308 Q96MF0 132 aa11.01□□□□□ -0.65
CLK4-201ENST00000316308 MRPL35Q9NZE8 188 aaKnown RBP11.01□□□□□ -0.65
CLK4-201ENST00000316308 MDFICQ9P1T7 246 aa11.01□□□□□ -0.65
CLK4-201ENST00000316308 K7EMT4 169 aa11□□□□□ -0.65
CLK4-201ENST00000316308 SLURP1P55000 103 aa11□□□□□ -0.65
CLK4-201ENST00000316308 BOD1L2Q8IYS8 172 aa11□□□□□ -0.65
CLK4-201ENST00000316308 NAA38Q9BRA0 125 aaKnown RBP11□□□□□ -0.65
CLK4-201ENST00000316308 ZNF580Q9UK33 172 aa11□□□□□ -0.65
CLK4-201ENST00000316308 PDZD2O15018 2839 aa11□□□□□ -0.65
CLK4-201ENST00000316308 K7EMI3 77 aa11□□□□□ -0.65
CLK4-201ENST00000316308 LINC00315P59091 139 aa11□□□□□ -0.65
CLK4-201ENST00000316308 SPINK13Q1W4C9 94 aa11□□□□□ -0.65
CLK4-201ENST00000316308 TMEM160Q9NX00 188 aa11□□□□□ -0.65
CLK4-201ENST00000316308 CD7P09564 240 aa10.99□□□□□ -0.65
CLK4-201ENST00000316308 KRTAP1-3Q8IUG1 177 aa10.99□□□□□ -0.65
CLK4-201ENST00000316308 SMIM2Q9BVW6 85 aa10.99□□□□□ -0.65
CLK4-201ENST00000316308 ZMAT4Q9H898 229 aa10.99□□□□□ -0.65
CLK4-201ENST00000316308 SUMO2P61956 95 aaKnown RBP10.98□□□□□ -0.65
CLK4-201ENST00000316308 DEFB113Q30KQ7 82 aa10.98□□□□□ -0.65
CLK4-201ENST00000316308 DEFB125Q8N687 156 aa10.98□□□□□ -0.65
CLK4-201ENST00000316308 DPH3P1Q9H4G8 78 aa10.98□□□□□ -0.65
CLK4-201ENST00000316308 ANK3Q12955 4377 aaKnown RBP10.98□□□□□ -0.65
CLK4-201ENST00000316308 ZC2HC1BQ5TFG8 222 aa10.98□□□□□ -0.65
CLK4-201ENST00000316308 ORAOV1Q8WV07 137 aa10.98□□□□□ -0.65
CLK4-201ENST00000316308 KIF25-AS1Q9Y6Z4 181 aa10.98□□□□□ -0.65
CLK4-201ENST00000316308 PRSS47A8MTI9 375 aa10.97□□□□□ -0.65
CLK4-201ENST00000316308 FAM159AQ6UWV7 190 aa10.97□□□□□ -0.65
CLK4-201ENST00000316308 A0A0J9YX75 114 aa10.97□□□□□ -0.65
CLK4-201ENST00000316308 K7EQG2 157 aa10.97□□□□□ -0.65
CLK4-201ENST00000316308 LGALS1P09382 135 aaKnown RBP10.97□□□□□ -0.65
CLK4-201ENST00000316308 PTTG1IPP53801 180 aa10.97□□□□□ -0.65
CLK4-201ENST00000316308 TCTEX1D4Q5JR98 221 aa10.97□□□□□ -0.65
CLK4-201ENST00000316308 J3QLI3 93 aa10.96□□□□□ -0.65
CLK4-201ENST00000316308 IGKCP01834 107 aa10.96□□□□□ -0.65
CLK4-201ENST00000316308 TMEM97Q5BJF2 176 aa10.96□□□□□ -0.65
CLK4-201ENST00000316308 FAM74A4Q5TZK3 123 aa10.96□□□□□ -0.65
CLK4-201ENST00000316308 C12orf54Q6X4T0 127 aa10.96□□□□□ -0.65
CLK4-201ENST00000316308 SETXQ7Z333 2677 aaKnown RBP10.96□□□□□ -0.66
CLK4-201ENST00000316308 TRAV8-6A0A0B4J262 113 aa10.96□□□□□ -0.66
CLK4-201ENST00000316308 RBMY1A1P0DJD3 496 aaKnown RBP10.96□□□□□ -0.66
CLK4-201ENST00000316308 RBMY1CP0DJD4 496 aa10.96□□□□□ -0.66
CLK4-201ENST00000316308 ID1P41134 155 aa10.96□□□□□ -0.66
CLK4-201ENST00000316308 RBMY1FQ15415 496 aaKnown RBP10.96□□□□□ -0.66
CLK4-201ENST00000316308 C11orf44Q8N8P7 122 aa10.96□□□□□ -0.66
CLK4-201ENST00000316308 WFDC11Q8NEX6 87 aa10.96□□□□□ -0.66
CLK4-201ENST00000316308 MYOZ3Q8TDC0 251 aa10.96□□□□□ -0.66
CLK4-201ENST00000316308 MRAP2Q96G30 205 aa10.96□□□□□ -0.66
CLK4-201ENST00000316308 KNCNA6PVL3 124 aa10.95□□□□□ -0.66
CLK4-201ENST00000316308 HTN1P15515 57 aa10.95□□□□□ -0.66
CLK4-201ENST00000316308 Q8N1Y9 231 aa10.95□□□□□ -0.66
CLK4-201ENST00000316308 MAPKAPK5-AS1Q8N8E1 139 aa10.95□□□□□ -0.66
CLK4-201ENST00000316308 OR1N2Q8NGR9 330 aa10.95□□□□□ -0.66
CLK4-201ENST00000316308 CSTL1Q9H114 145 aa10.95□□□□□ -0.66
CLK4-201ENST00000316308 VAMP3Q15836 100 aa10.94□□□□□ -0.66
CLK4-201ENST00000316308 UBE2V1Q13404 147 aa10.94□□□□□ -0.66
CLK4-201ENST00000316308 AMMECR1LQ6DCA0 310 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms