RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 SNURFLB1AK76 121 aa16.17■□□□□ 0.18
CCDC85B-201ENST00000312579 DEFB4AO15263 64 aa16.17■□□□□ 0.18
CCDC85B-201ENST00000312579 FAM159AQ6UWV7 190 aa16.17■□□□□ 0.18
CCDC85B-201ENST00000312579 ZFP82Q8N141 532 aa16.17■□□□□ 0.18
CCDC85B-201ENST00000312579 A0A1B0GUT8 65 aa16.16■□□□□ 0.18
CCDC85B-201ENST00000312579 CBY3A6NI87 242 aa16.16■□□□□ 0.18
CCDC85B-201ENST00000312579 IGLC6P0CF74 106 aa16.16■□□□□ 0.18
CCDC85B-201ENST00000312579 RAB4BP61018 213 aa16.16■□□□□ 0.18
CCDC85B-201ENST00000312579 HBBP68871 147 aa16.16■□□□□ 0.18
CCDC85B-201ENST00000312579 LYZL1Q6UWQ5 148 aa16.16■□□□□ 0.18
CCDC85B-201ENST00000312579 ZNF575Q86XF7 245 aa16.16■□□□□ 0.18
CCDC85B-201ENST00000312579 FRZBQ92765 325 aa16.16■□□□□ 0.18
CCDC85B-201ENST00000312579 GNB1LQ9BYB4 327 aa16.16■□□□□ 0.18
CCDC85B-201ENST00000312579 HUWE1Q7Z6Z7 4374 aaKnown RBP16.16■□□□□ 0.18
CCDC85B-201ENST00000312579 A0A1B0GXF2 115 aa16.15■□□□□ 0.18
CCDC85B-201ENST00000312579 MT-ND6P03923 174 aa16.15■□□□□ 0.18
CCDC85B-201ENST00000312579 RIGQ13278 110 aa16.15■□□□□ 0.18
CCDC85B-201ENST00000312579 COL7A1Q02388 2944 aa16.14■□□□□ 0.18
CCDC85B-201ENST00000312579 ARMS2P0C7Q2 107 aa16.14■□□□□ 0.18
CCDC85B-201ENST00000312579 CTRLP40313 264 aa16.14■□□□□ 0.18
CCDC85B-201ENST00000312579 CAMPP49913 170 aa16.14■□□□□ 0.18
CCDC85B-201ENST00000312579 FABP9Q0Z7S8 132 aa16.14■□□□□ 0.18
CCDC85B-201ENST00000312579 RRN3P1Q2M238 152 aa16.14■□□□□ 0.18
CCDC85B-201ENST00000312579 TMEM136Q6ZRR5 245 aa16.14■□□□□ 0.18
CCDC85B-201ENST00000312579 ZMAT4Q9H898 229 aa16.14■□□□□ 0.18
CCDC85B-201ENST00000312579 IGHV4-28A0A0C4DH34 117 aa16.14■□□□□ 0.17
CCDC85B-201ENST00000312579 MRPL18Q9H0U6 180 aaKnown RBP16.14■□□□□ 0.17
CCDC85B-201ENST00000312579 MDFICQ9P1T7 246 aa16.14■□□□□ 0.17
CCDC85B-201ENST00000312579 A0A1B0GW15 77 aa16.13■□□□□ 0.17
CCDC85B-201ENST00000312579 HLA-DQA1P01909 254 aa16.13■□□□□ 0.17
CCDC85B-201ENST00000312579 TDRG1Q3Y452 100 aa16.13■□□□□ 0.17
CCDC85B-201ENST00000312579 Q8NAQ8 132 aa16.13■□□□□ 0.17
CCDC85B-201ENST00000312579 KCNS1Q96KK3 526 aa16.13■□□□□ 0.17
CCDC85B-201ENST00000312579 LINC00467Q9BRT7 94 aa16.13■□□□□ 0.17
CCDC85B-201ENST00000312579 F2Z2F3 143 aa16.12■□□□□ 0.17
CCDC85B-201ENST00000312579 S100A8P05109 93 aa16.12■□□□□ 0.17
CCDC85B-201ENST00000312579 ASIPP42127 132 aa16.12■□□□□ 0.17
CCDC85B-201ENST00000312579 EMP1P54849 157 aa16.12■□□□□ 0.17
CCDC85B-201ENST00000312579 PHOX2AO14813 284 aa16.11■□□□□ 0.17
CCDC85B-201ENST00000312579 RNASE8Q8TDE3 154 aaKnown RBP16.11■□□□□ 0.17
CCDC85B-201ENST00000312579 PLAC8L1A1L4L8 177 aa16.1■□□□□ 0.17
CCDC85B-201ENST00000312579 SMIM9A6NGZ8 99 aa16.1■□□□□ 0.17
CCDC85B-201ENST00000312579 S100A4P26447 101 aaKnown RBP16.1■□□□□ 0.17
CCDC85B-201ENST00000312579 C11orf72Q8NBR9 251 aa16.1■□□□□ 0.17
CCDC85B-201ENST00000312579 GSN-AS1Q9NRJ2 163 aa16.1■□□□□ 0.17
CCDC85B-201ENST00000312579 TIMM8BQ9Y5J9 83 aaPredicted RBP16.1■□□□□ 0.17
CCDC85B-201ENST00000312579 IGHV3-16A0A0C4DH30 117 aa16.09■□□□□ 0.17
CCDC85B-201ENST00000312579 MUC21A0A0G2JKD1 596 aa16.09■□□□□ 0.17
CCDC85B-201ENST00000312579 MUC21A0A140T8X8 626 aa16.09■□□□□ 0.17
CCDC85B-201ENST00000312579 H3BVH4 76 aa16.09■□□□□ 0.17
CCDC85B-201ENST00000312579 TRGC1P0CF51 173 aa16.09■□□□□ 0.17
CCDC85B-201ENST00000312579 MIFP14174 115 aa16.09■□□□□ 0.17
CCDC85B-201ENST00000312579 TMEM263Q8WUH6 116 aaKnown RBP16.09■□□□□ 0.17
CCDC85B-201ENST00000312579 OR5AL1P0C617 328 aa16.09■□□□□ 0.17
CCDC85B-201ENST00000312579 SSTP61278 116 aa16.09■□□□□ 0.17
CCDC85B-201ENST00000312579 TRGV11A0A075B6L2 103 aa16.08■□□□□ 0.16
CCDC85B-201ENST00000312579 SNAI2O43623 268 aa16.08■□□□□ 0.16
CCDC85B-201ENST00000312579 APCSP02743 223 aa16.08■□□□□ 0.16
CCDC85B-201ENST00000312579 NHLRC4P0CG21 123 aaPredicted RBP16.08■□□□□ 0.16
CCDC85B-201ENST00000312579 DNLZQ5SXM8 178 aa16.08■□□□□ 0.16
CCDC85B-201ENST00000312579 C16orf74Q96GX8 76 aa16.08■□□□□ 0.16
CCDC85B-201ENST00000312579 A0A0J9YWU9 116 aa16.07■□□□□ 0.16
CCDC85B-201ENST00000312579 HIST1H2BKO60814 126 aa16.07■□□□□ 0.16
CCDC85B-201ENST00000312579 HIST1H2BJP06899 126 aa16.07■□□□□ 0.16
CCDC85B-201ENST00000312579 MED14OSP0DP75 135 aa16.07■□□□□ 0.16
CCDC85B-201ENST00000312579 HIST1H2BOP23527 126 aa16.07■□□□□ 0.16
CCDC85B-201ENST00000312579 HIST1H2BBP33778 126 aa16.07■□□□□ 0.16
CCDC85B-201ENST00000312579 HIST1H2BDP58876 126 aa16.07■□□□□ 0.16
CCDC85B-201ENST00000312579 HIST1H2BCP62807 126 aa16.07■□□□□ 0.16
CCDC85B-201ENST00000312579 TWIST1Q15672 202 aa16.07■□□□□ 0.16
CCDC85B-201ENST00000312579 HIST2H2BEQ16778 126 aa16.07■□□□□ 0.16
CCDC85B-201ENST00000312579 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.07■□□□□ 0.16
CCDC85B-201ENST00000312579 HIST1H2BHQ93079 126 aa16.07■□□□□ 0.16
CCDC85B-201ENST00000312579 HIST1H2BNQ99877 126 aa16.07■□□□□ 0.16
CCDC85B-201ENST00000312579 HIST1H2BMQ99879 126 aa16.07■□□□□ 0.16
CCDC85B-201ENST00000312579 SSBP4Q9BWG4 385 aaPredicted RBP16.07■□□□□ 0.16
CCDC85B-201ENST00000312579 CNFNQ9BYD5 112 aa16.07■□□□□ 0.16
CCDC85B-201ENST00000312579 RNASE3P12724 160 aaKnown RBP16.06■□□□□ 0.16
CCDC85B-201ENST00000312579 CACNG7P62955 275 aa16.06■□□□□ 0.16
CCDC85B-201ENST00000312579 S100A6P06703 90 aa16.05■□□□□ 0.16
CCDC85B-201ENST00000312579 NTF3P20783 257 aa16.05■□□□□ 0.16
CCDC85B-201ENST00000312579 ZNF415Q09FC8 603 aa16.05■□□□□ 0.16
CCDC85B-201ENST00000312579 ZNF493Q6ZR52 646 aa16.05■□□□□ 0.16
CCDC85B-201ENST00000312579 GATD1Q8NB37 220 aa16.05■□□□□ 0.16
CCDC85B-201ENST00000312579 OR10AG1Q8NH19 301 aa16.05■□□□□ 0.16
CCDC85B-201ENST00000312579 NOP10Q9NPE3 64 aaKnown RBP16.05■□□□□ 0.16
CCDC85B-201ENST00000312579 SLAQ13239 276 aa16.04■□□□□ 0.16
CCDC85B-201ENST00000312579 SPANXN1Q5VSR9 72 aa16.04■□□□□ 0.16
CCDC85B-201ENST00000312579 IL17DQ8TAD2 202 aa16.04■□□□□ 0.16
CCDC85B-201ENST00000312579 CELA1Q9UNI1 258 aa16.04■□□□□ 0.16
CCDC85B-201ENST00000312579 KIAA1644Q3SXP7 199 aa16.03■□□□□ 0.16
CCDC85B-201ENST00000312579 C9orf85Q96MD7 179 aa16.03■□□□□ 0.16
CCDC85B-201ENST00000312579 PHLDA3Q9Y5J5 127 aa16.03■□□□□ 0.16
CCDC85B-201ENST00000312579 SCRT2Q9NQ03 307 aa16.02■□□□□ 0.15
CCDC85B-201ENST00000312579 IGHV4-4A0A075B6R2 117 aa16.01■□□□□ 0.15
CCDC85B-201ENST00000312579 NDUFA6P56556 154 aa16.01■□□□□ 0.15
CCDC85B-201ENST00000312579 FAM222AQ5U5X8 452 aa16.01■□□□□ 0.15
CCDC85B-201ENST00000312579 C11orf68Q9H3H3 251 aaKnown RBP16.01■□□□□ 0.15
CCDC85B-201ENST00000312579 MRPL16Q9NX20 251 aaKnown RBP16.01■□□□□ 0.15
CCDC85B-201ENST00000312579 MSRB1Q9NZV6 116 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms