RNA–Protein interactions for RNA: ENST00000310483.10

SLC39A1-201, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-201ENST00000310483 SCGB1A1P11684 91 aa11.91□□□□□ -0.5
SLC39A1-201ENST00000310483 MUC4Q99102 2169 aa11.91□□□□□ -0.5
SLC39A1-201ENST00000310483 TRBV7-1A0A0A6YYK4 115 aa11.91□□□□□ -0.5
SLC39A1-201ENST00000310483 A0A1W2PPR1 153 aa11.91□□□□□ -0.5
SLC39A1-201ENST00000310483 LINC01619G3V211 115 aa11.91□□□□□ -0.5
SLC39A1-201ENST00000310483 RNASE4P34096 147 aaKnown RBP11.91□□□□□ -0.5
SLC39A1-201ENST00000310483 MAP1AP78559 2803 aaPredicted RBP11.91□□□□□ -0.5
SLC39A1-201ENST00000310483 IGHV3OR16-10A0A075B7F0 116 aa11.9□□□□□ -0.5
SLC39A1-201ENST00000310483 LOC107984156A0A0G2JMH3 177 aa11.9□□□□□ -0.5
SLC39A1-201ENST00000310483 CRYGDP07320 174 aa11.9□□□□□ -0.5
SLC39A1-201ENST00000310483 KLK9Q2XQG4 91 aa11.9□□□□□ -0.5
SLC39A1-201ENST00000310483 FBXL19-AS1Q494R0 122 aa11.9□□□□□ -0.5
SLC39A1-201ENST00000310483 ARL17AQ8IVW1 177 aa11.9□□□□□ -0.5
SLC39A1-201ENST00000310483 PTH2Q96A98 100 aa11.9□□□□□ -0.5
SLC39A1-201ENST00000310483 KLK9Q9UKQ9 250 aa11.9□□□□□ -0.5
SLC39A1-201ENST00000310483 CENPVL3A0A0U1RRI6 287 aa11.9□□□□□ -0.5
SLC39A1-201ENST00000310483 TSPAN13O95857 204 aa11.9□□□□□ -0.5
SLC39A1-201ENST00000310483 COX6B1P14854 86 aa11.9□□□□□ -0.5
SLC39A1-201ENST00000310483 PSMB2P49721 201 aa11.9□□□□□ -0.5
SLC39A1-201ENST00000310483 ADORA2A-AS1P86434 159 aa11.9□□□□□ -0.5
SLC39A1-201ENST00000310483 TCF15Q12870 199 aa11.9□□□□□ -0.5
SLC39A1-201ENST00000310483 SRSF9Q13242 221 aaKnown RBP eCLIP11.9□□□□□ -0.5
SLC39A1-201ENST00000310483 NFE4Q86UQ8 179 aa11.9□□□□□ -0.5
SLC39A1-201ENST00000310483 WFDC12Q8WWY7 111 aa11.9□□□□□ -0.5
SLC39A1-201ENST00000310483 ASIPP42127 132 aa11.89□□□□□ -0.51
SLC39A1-201ENST00000310483 UBE2E1P51965 193 aa11.89□□□□□ -0.51
SLC39A1-201ENST00000310483 MUC6Q6W4X9 2439 aa11.89□□□□□ -0.51
SLC39A1-201ENST00000310483 COL6A6A6NMZ7 2263 aa11.89□□□□□ -0.51
SLC39A1-201ENST00000310483 TSHBP01222 138 aa11.89□□□□□ -0.51
SLC39A1-201ENST00000310483 CFAP126Q5VTH2 177 aa11.89□□□□□ -0.51
SLC39A1-201ENST00000310483 ZNF418Q8TF45 676 aaPredicted RBP11.89□□□□□ -0.51
SLC39A1-201ENST00000310483 JPT2Q9H910 190 aa11.89□□□□□ -0.51
SLC39A1-201ENST00000310483 TRAV21A0A0B4J279 112 aa11.88□□□□□ -0.51
SLC39A1-201ENST00000310483 C11orf86A6NJI1 115 aa11.88□□□□□ -0.51
SLC39A1-201ENST00000310483 FOXI1Q12951 378 aa11.88□□□□□ -0.51
SLC39A1-201ENST00000310483 C9orf139Q6ZV77 190 aa11.88□□□□□ -0.51
SLC39A1-201ENST00000310483 C5orf56Q8N8D9 126 aa11.88□□□□□ -0.51
SLC39A1-201ENST00000310483 ATP6V0BQ99437 205 aa11.88□□□□□ -0.51
SLC39A1-201ENST00000310483 RNASE3P12724 160 aaKnown RBP11.88□□□□□ -0.51
SLC39A1-201ENST00000310483 RPL11P62913 178 aaKnown RBP11.88□□□□□ -0.51
SLC39A1-201ENST00000310483 OR10J6PQ8NGY7 276 aa11.88□□□□□ -0.51
SLC39A1-201ENST00000310483 IGLV4-69A0A075B6H9 119 aa11.87□□□□□ -0.51
SLC39A1-201ENST00000310483 TGFAP01135 160 aa11.87□□□□□ -0.51
SLC39A1-201ENST00000310483 ARL3P36405 182 aa11.87□□□□□ -0.51
SLC39A1-201ENST00000310483 UBE2D1P51668 147 aa11.87□□□□□ -0.51
SLC39A1-201ENST00000310483 RPL39P62891 51 aaKnown RBP11.87□□□□□ -0.51
SLC39A1-201ENST00000310483 FHL3Q13643 280 aa11.87□□□□□ -0.51
SLC39A1-201ENST00000310483 Q6ZS46 218 aa11.87□□□□□ -0.51
SLC39A1-201ENST00000310483 SYT8Q8NBV8 401 aa11.87□□□□□ -0.51
SLC39A1-201ENST00000310483 FOXC1Q12948 553 aa11.87□□□□□ -0.51
SLC39A1-201ENST00000310483 DLX4Q92988 240 aaPredicted RBP11.87□□□□□ -0.51
SLC39A1-201ENST00000310483 LINC00477Q96M19 166 aa11.87□□□□□ -0.51
SLC39A1-201ENST00000310483 TP53TG1Q9Y2A0 90 aa11.87□□□□□ -0.51
SLC39A1-201ENST00000310483 IGF2RP11717 2491 aa11.86□□□□□ -0.51
SLC39A1-201ENST00000310483 SOCS3O14543 225 aa11.86□□□□□ -0.51
SLC39A1-201ENST00000310483 TSPEAR-AS2P59090 65 aa11.86□□□□□ -0.51
SLC39A1-201ENST00000310483 C1QTNF4Q9BXJ3 329 aa11.86□□□□□ -0.51
SLC39A1-201ENST00000310483 SPTAN1Q13813 2472 aaKnown RBP11.86□□□□□ -0.51
SLC39A1-201ENST00000310483 TRAV41A0A0B4J266 112 aa11.86□□□□□ -0.51
SLC39A1-201ENST00000310483 K7ENP7 123 aa11.86□□□□□ -0.51
SLC39A1-201ENST00000310483 IGHV3-11P01762 117 aa11.86□□□□□ -0.51
SLC39A1-201ENST00000310483 CDIP1Q9H305 208 aa11.86□□□□□ -0.51
SLC39A1-201ENST00000310483 CRYBG3Q68DQ2 2970 aa11.85□□□□□ -0.51
SLC39A1-201ENST00000310483 CD7P09564 240 aa11.85□□□□□ -0.51
SLC39A1-201ENST00000310483 SRD5A1P18405 259 aa11.85□□□□□ -0.51
SLC39A1-201ENST00000310483 LENEPQ9Y5L5 61 aa11.85□□□□□ -0.51
SLC39A1-201ENST00000310483 A0A0J9YY99 117 aa11.84□□□□□ -0.51
SLC39A1-201ENST00000310483 NPFFO15130 113 aa11.84□□□□□ -0.51
SLC39A1-201ENST00000310483 A0A087WWL8 130 aa11.84□□□□□ -0.51
SLC39A1-201ENST00000310483 A0A1B0GV72 72 aa11.84□□□□□ -0.51
SLC39A1-201ENST00000310483 TMEM238LA0A1B0GVL6 79 aa11.84□□□□□ -0.51
SLC39A1-201ENST00000310483 A6NJY4 79 aa11.84□□□□□ -0.51
SLC39A1-201ENST00000310483 EDN2P20800 178 aa11.84□□□□□ -0.51
SLC39A1-201ENST00000310483 LINC00315P59091 139 aa11.84□□□□□ -0.51
SLC39A1-201ENST00000310483 CKS1BP61024 79 aa11.84□□□□□ -0.51
SLC39A1-201ENST00000310483 NDUFA11Q86Y39 141 aa11.83□□□□□ -0.52
SLC39A1-201ENST00000310483 CARD19Q96LW7 228 aa11.83□□□□□ -0.52
SLC39A1-201ENST00000310483 BPESC1Q9GZL8 116 aa11.83□□□□□ -0.52
SLC39A1-201ENST00000310483 OVOL1O14753 267 aa11.82□□□□□ -0.52
SLC39A1-201ENST00000310483 TCL1BO95988 128 aa11.82□□□□□ -0.52
SLC39A1-201ENST00000310483 UBE2D3P61077 147 aa11.82□□□□□ -0.52
SLC39A1-201ENST00000310483 UBE2D2P62837 147 aa11.82□□□□□ -0.52
SLC39A1-201ENST00000310483 FAM19A4Q96LR4 140 aa11.82□□□□□ -0.52
SLC39A1-201ENST00000310483 KIF25-AS1Q9Y6Z4 181 aa11.82□□□□□ -0.52
SLC39A1-201ENST00000310483 IGIPA6NJ69 53 aa11.82□□□□□ -0.52
SLC39A1-201ENST00000310483 MT-ATP8P03928 68 aa11.82□□□□□ -0.52
SLC39A1-201ENST00000310483 CLUHP3Q96NS8 147 aa11.82□□□□□ -0.52
SLC39A1-201ENST00000310483 C19orf54Q5BKX5 351 aa11.81□□□□□ -0.52
SLC39A1-201ENST00000310483 SUMO4Q6EEV6 95 aa11.81□□□□□ -0.52
SLC39A1-201ENST00000310483 BRD3OSQ6XYD6 125 aa11.81□□□□□ -0.52
SLC39A1-201ENST00000310483 ZNRF2Q8NHG8 242 aa11.81□□□□□ -0.52
SLC39A1-201ENST00000310483 UBTD1Q9HAC8 227 aa11.81□□□□□ -0.52
SLC39A1-201ENST00000310483 ABCA2Q9BZC7 2435 aa11.81□□□□□ -0.52
SLC39A1-201ENST00000310483 CFC1BP0CG36 223 aa11.81□□□□□ -0.52
SLC39A1-201ENST00000310483 CFC1P0CG37 223 aa11.81□□□□□ -0.52
SLC39A1-201ENST00000310483 LMO4P61968 165 aa11.81□□□□□ -0.52
SLC39A1-201ENST00000310483 Q5PR19 223 aa11.81□□□□□ -0.52
SLC39A1-201ENST00000310483 TMEM170BQ5T4T1 132 aa11.81□□□□□ -0.52
SLC39A1-201ENST00000310483 OPRPNQ99935 248 aaPredicted RBP11.8□□□□□ -0.52
SLC39A1-201ENST00000310483 FAM223BA6NKX1 122 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms