RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 A0A087WWL8 130 aa8.7□□□□□ -1.02
PTPN2-201ENST00000309660 GATA3P23771 443 aa8.7□□□□□ -1.02
PTPN2-201ENST00000309660 PSMB8P28062 276 aa8.7□□□□□ -1.02
PTPN2-201ENST00000309660 ORAOV1Q8WV07 137 aa8.7□□□□□ -1.02
PTPN2-201ENST00000309660 HOXA3O43365 443 aaPredicted RBP8.69□□□□□ -1.02
PTPN2-201ENST00000309660 ODF1Q14990 250 aa8.69□□□□□ -1.02
PTPN2-201ENST00000309660 TMEM97Q5BJF2 176 aa8.69□□□□□ -1.02
PTPN2-201ENST00000309660 ZC2HC1BQ5TFG8 222 aa8.69□□□□□ -1.02
PTPN2-201ENST00000309660 OR4C5Q8NGB2 326 aa8.69□□□□□ -1.02
PTPN2-201ENST00000309660 DPF1Q92782 380 aa8.69□□□□□ -1.02
PTPN2-201ENST00000309660 RAB37Q96AX2 223 aa8.69□□□□□ -1.02
PTPN2-201ENST00000309660 DPH3P1Q9H4G8 78 aa8.69□□□□□ -1.02
PTPN2-201ENST00000309660 MRPL35Q9NZE8 188 aaKnown RBP8.69□□□□□ -1.02
PTPN2-201ENST00000309660 IGKV2D-26A0A0A0MRZ7 120 aa8.68□□□□□ -1.02
PTPN2-201ENST00000309660 IGKCP01834 107 aa8.68□□□□□ -1.02
PTPN2-201ENST00000309660 SRSF1Q07955 248 aaKnown RBP eCLIP8.68□□□□□ -1.02
PTPN2-201ENST00000309660 DUX3Q96PT4 197 aa8.68□□□□□ -1.02
PTPN2-201ENST00000309660 TRAV8-6A0A0B4J262 113 aa8.68□□□□□ -1.02
PTPN2-201ENST00000309660 TAX1BP3O14907 124 aa8.68□□□□□ -1.02
PTPN2-201ENST00000309660 SUMO2P61956 95 aaKnown RBP8.68□□□□□ -1.02
PTPN2-201ENST00000309660 SMIM2Q9BVW6 85 aa8.68□□□□□ -1.02
PTPN2-201ENST00000309660 CFHR3Q02985 330 aa8.68□□□□□ -1.02
PTPN2-201ENST00000309660 SPINK13Q1W4C9 94 aa8.68□□□□□ -1.02
PTPN2-201ENST00000309660 AP1S3Q96PC3 154 aa8.68□□□□□ -1.02
PTPN2-201ENST00000309660 ACANP16112 2415 aa8.68□□□□□ -1.02
PTPN2-201ENST00000309660 IGLV2-18A0A075B6J9 118 aa8.67□□□□□ -1.02
PTPN2-201ENST00000309660 FGF6P10767 208 aa8.67□□□□□ -1.02
PTPN2-201ENST00000309660 AMMECR1LQ6DCA0 310 aa8.67□□□□□ -1.02
PTPN2-201ENST00000309660 DCANP1Q8TF63 244 aa8.67□□□□□ -1.02
PTPN2-201ENST00000309660 MTORP42345 2549 aa8.67□□□□□ -1.02
PTPN2-201ENST00000309660 IGHV4OR15-8A0A075B7B6 117 aa8.67□□□□□ -1.02
PTPN2-201ENST00000309660 A0A087WW49 117 aa8.67□□□□□ -1.02
PTPN2-201ENST00000309660 ATP5LO75964 103 aa8.67□□□□□ -1.02
PTPN2-201ENST00000309660 RNASE3P12724 160 aaKnown RBP8.67□□□□□ -1.02
PTPN2-201ENST00000309660 UBE2V1Q13404 147 aa8.67□□□□□ -1.02
PTPN2-201ENST00000309660 DEFB125Q8N687 156 aa8.67□□□□□ -1.02
PTPN2-201ENST00000309660 RASL10AQ92737 203 aa8.67□□□□□ -1.02
PTPN2-201ENST00000309660 DPM2O94777 84 aa8.67□□□□□ -1.02
PTPN2-201ENST00000309660 SNRPD3P62318 126 aaKnown RBP8.67□□□□□ -1.02
PTPN2-201ENST00000309660 Q5PR19 223 aa8.67□□□□□ -1.02
PTPN2-201ENST00000309660 SCGB3A1Q96QR1 104 aa8.67□□□□□ -1.02
PTPN2-201ENST00000309660 VPREB3Q9UKI3 123 aa8.67□□□□□ -1.02
PTPN2-201ENST00000309660 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.66□□□□□ -1.02
PTPN2-201ENST00000309660 GCSHP23434 173 aa8.66□□□□□ -1.02
PTPN2-201ENST00000309660 BOD1L2Q8IYS8 172 aa8.66□□□□□ -1.02
PTPN2-201ENST00000309660 OR1N2Q8NGR9 330 aa8.66□□□□□ -1.02
PTPN2-201ENST00000309660 MRAP2Q96G30 205 aa8.66□□□□□ -1.02
PTPN2-201ENST00000309660 HOXD3P31249 432 aaPredicted RBP8.66□□□□□ -1.02
PTPN2-201ENST00000309660 C18orf65Q6ZTR6 163 aa8.66□□□□□ -1.02
PTPN2-201ENST00000309660 CSTL1Q9H114 145 aa8.66□□□□□ -1.02
PTPN2-201ENST00000309660 MUC4Q99102 2169 aa8.65□□□□□ -1.02
PTPN2-201ENST00000309660 IGHV4-4A0A075B6R2 117 aa8.65□□□□□ -1.02
PTPN2-201ENST00000309660 K7EMI3 77 aa8.65□□□□□ -1.02
PTPN2-201ENST00000309660 K7EP13 123 aa8.65□□□□□ -1.02
PTPN2-201ENST00000309660 C11orf44Q8N8P7 122 aa8.65□□□□□ -1.02
PTPN2-201ENST00000309660 Q96MF0 132 aa8.65□□□□□ -1.02
PTPN2-201ENST00000309660 ZNF843Q8N446 348 aa8.65□□□□□ -1.03
PTPN2-201ENST00000309660 K7EMT4 169 aa8.64□□□□□ -1.03
PTPN2-201ENST00000309660 IGHV4-31P0DP07 118 aa8.64□□□□□ -1.03
PTPN2-201ENST00000309660 HHLA3Q9XRX5 114 aa8.64□□□□□ -1.03
PTPN2-201ENST00000309660 EMP1P54849 157 aa8.64□□□□□ -1.03
PTPN2-201ENST00000309660 SLURP1P55000 103 aa8.64□□□□□ -1.03
PTPN2-201ENST00000309660 MDFICQ9P1T7 246 aa8.64□□□□□ -1.03
PTPN2-201ENST00000309660 BRI3O95415 125 aa8.64□□□□□ -1.03
PTPN2-201ENST00000309660 NF1P21359 2839 aa8.63□□□□□ -1.03
PTPN2-201ENST00000309660 ZNF56Q15929 161 aa8.63□□□□□ -1.03
PTPN2-201ENST00000309660 C2orf66Q6UXQ4 117 aa8.63□□□□□ -1.03
PTPN2-201ENST00000309660 ZNF256Q9Y2P7 627 aaPredicted RBP8.63□□□□□ -1.03
PTPN2-201ENST00000309660 A0A096LNT2 108 aa8.63□□□□□ -1.03
PTPN2-201ENST00000309660 H3BUT2 72 aa8.63□□□□□ -1.03
PTPN2-201ENST00000309660 J3QLI3 93 aa8.63□□□□□ -1.03
PTPN2-201ENST00000309660 TCTEX1D4Q5JR98 221 aa8.63□□□□□ -1.03
PTPN2-201ENST00000309660 OR9G4Q8NGQ1 327 aa8.63□□□□□ -1.03
PTPN2-201ENST00000309660 LGALS1P09382 135 aaKnown RBP8.63□□□□□ -1.03
PTPN2-201ENST00000309660 ORMDL2Q53FV1 153 aa8.63□□□□□ -1.03
PTPN2-201ENST00000309660 HIST2H2BCQ6DN03 193 aa8.63□□□□□ -1.03
PTPN2-201ENST00000309660 FAM19A4Q96LR4 140 aa8.63□□□□□ -1.03
PTPN2-201ENST00000309660 FLNAP21333 2647 aaKnown RBP8.63□□□□□ -1.03
PTPN2-201ENST00000309660 A6NDN8 102 aa8.62□□□□□ -1.03
PTPN2-201ENST00000309660 KNCNA6PVL3 124 aa8.62□□□□□ -1.03
PTPN2-201ENST00000309660 KLLNB2CW77 178 aa8.62□□□□□ -1.03
PTPN2-201ENST00000309660 HSD52Q0P140 79 aa8.62□□□□□ -1.03
PTPN2-201ENST00000309660 NOTCH2Q04721 2471 aa8.62□□□□□ -1.03
PTPN2-201ENST00000309660 ZNF702PQ9H963 129 aa8.62□□□□□ -1.03
PTPN2-201ENST00000309660 A0A0J9YX75 114 aa8.61□□□□□ -1.03
PTPN2-201ENST00000309660 SEC11AP67812 179 aa8.61□□□□□ -1.03
PTPN2-201ENST00000309660 Q8N1Y9 231 aa8.61□□□□□ -1.03
PTPN2-201ENST00000309660 ITPR3Q14573 2671 aa8.61□□□□□ -1.03
PTPN2-201ENST00000309660 APCP25054 2843 aa8.61□□□□□ -1.03
PTPN2-201ENST00000309660 UBR5O95071 2799 aaPredicted RBP8.61□□□□□ -1.03
PTPN2-201ENST00000309660 A0A087WX48 190 aa8.61□□□□□ -1.03
PTPN2-201ENST00000309660 PRM2P04554 102 aa8.61□□□□□ -1.03
PTPN2-201ENST00000309660 DEFB113Q30KQ7 82 aa8.61□□□□□ -1.03
PTPN2-201ENST00000309660 Q6YL49 198 aa8.61□□□□□ -1.03
PTPN2-201ENST00000309660 CHTOPQ9Y3Y2 248 aaKnown RBP8.61□□□□□ -1.03
PTPN2-201ENST00000309660 CHD6Q8TD26 2715 aa8.61□□□□□ -1.03
PTPN2-201ENST00000309660 IGHV3-73A0A0B4J1V6 119 aa8.61□□□□□ -1.03
PTPN2-201ENST00000309660 LINC01546A6NGU7 62 aa8.61□□□□□ -1.03
PTPN2-201ENST00000309660 CDKN1BP46527 198 aa8.61□□□□□ -1.03
PTPN2-201ENST00000309660 SUMO4Q6EEV6 95 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms