RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 A0A1W2PRE2 83 aa3.72□□□□□ -1.81
CAST-201ENST00000309190 TMEM213A2RRL7 107 aa3.72□□□□□ -1.81
CAST-201ENST00000309190 LTAP01374 205 aa3.72□□□□□ -1.81
CAST-201ENST00000309190 IGHG4P01861 327 aa3.72□□□□□ -1.81
CAST-201ENST00000309190 GNG4P50150 75 aa3.72□□□□□ -1.81
CAST-201ENST00000309190 CENPWQ5EE01 88 aa3.72□□□□□ -1.81
CAST-201ENST00000309190 LCN12Q6JVE5 192 aa3.72□□□□□ -1.81
CAST-201ENST00000309190 TMEM158Q8WZ71 300 aa3.72□□□□□ -1.81
CAST-201ENST00000309190 GRAMD2BQ96HH9 432 aa3.72□□□□□ -1.81
CAST-201ENST00000309190 LINC01587Q99440 93 aa3.72□□□□□ -1.81
CAST-201ENST00000309190 MT-ND6P03923 174 aa3.71□□□□□ -1.82
CAST-201ENST00000309190 LGALS1P09382 135 aaKnown RBP3.71□□□□□ -1.82
CAST-201ENST00000309190 TMEM183BQ1AE95 376 aa3.71□□□□□ -1.82
CAST-201ENST00000309190 C8orf31Q8N9H6 132 aa3.71□□□□□ -1.82
CAST-201ENST00000309190 PGLYRP4Q96LB8 373 aa3.71□□□□□ -1.82
CAST-201ENST00000309190 LOC389332A0A1B0GUA5 103 aa3.71□□□□□ -1.82
CAST-201ENST00000309190 C20orf202A1L168 122 aa3.71□□□□□ -1.82
CAST-201ENST00000309190 RNASE1P07998 156 aaKnown RBP3.71□□□□□ -1.82
CAST-201ENST00000309190 CT45A10P0DMU9 189 aa3.71□□□□□ -1.82
CAST-201ENST00000309190 GP9P14770 177 aa3.71□□□□□ -1.82
CAST-201ENST00000309190 RPL7P18124 248 aaKnown RBP3.71□□□□□ -1.82
CAST-201ENST00000309190 PROK1P58294 105 aa3.71□□□□□ -1.82
CAST-201ENST00000309190 PLP1P60201 277 aa3.71□□□□□ -1.82
CAST-201ENST00000309190 TMEM78Q5T7P6 136 aa3.71□□□□□ -1.82
CAST-201ENST00000309190 Q8N1Y9 231 aa3.71□□□□□ -1.82
CAST-201ENST00000309190 CBY3A6NI87 242 aa3.71□□□□□ -1.82
CAST-201ENST00000309190 GNRH2O43555 120 aa3.71□□□□□ -1.82
CAST-201ENST00000309190 MGPP08493 103 aa3.71□□□□□ -1.82
CAST-201ENST00000309190 Q6ZVH6 145 aa3.71□□□□□ -1.82
CAST-201ENST00000309190 C20orf173Q96LM9 149 aa3.71□□□□□ -1.82
CAST-201ENST00000309190 CHEK1O14757 476 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 VN1R17PQ8TDU5 208 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 TRBV7-1A0A0A6YYK4 115 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 BUB3O43684 328 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 ZNF253O75346 499 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 SNRPD3P62318 126 aaKnown RBP3.7□□□□□ -1.82
CAST-201ENST00000309190 EBI3Q14213 229 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 ATP5L2Q7Z4Y8 100 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 NUP35Q8NFH5 326 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 OR10J6PQ8NGY7 276 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 JPT2Q9H910 190 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 SMPXQ9UHP9 88 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 LAMTOR2Q9Y2Q5 125 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 A0A0J9YY99 117 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 PMCHP20382 165 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 ID1P41134 155 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 LINC01545Q5VT33 79 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 PHLDA1Q8WV24 401 aaPredicted RBP3.7□□□□□ -1.82
CAST-201ENST00000309190 C18orf15Q96N68 181 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 RNF5Q99942 180 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 IGHV1-24A0A0C4DH33 117 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 H3BVH4 76 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 ELANEP08246 267 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 ZNF493Q6ZR52 646 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 GFRA4Q9GZZ7 299 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 ZNF492Q9P255 531 aa3.7□□□□□ -1.82
CAST-201ENST00000309190 IGHV7-4-1A0A0J9YVY3 117 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 CRISP2P16562 243 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 ZNF138P52744 262 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 COL5A1-AS1Q5SY13 56 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 BVES-AS1Q5T3Y7 98 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 NEGR1Q7Z3B1 354 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 GTSCR1Q86UQ5 136 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 USMG5Q96IX5 58 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 MSRB1Q9NZV6 116 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 UQCR10Q9UDW1 63 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 SMAD5-AS1Q9Y6J3 95 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 SMKR1H3BMG3 65 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 HERV-K104P63124 156 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 SAPCD1Q5SSQ6 148 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 ADAMTSL5Q6ZMM2 481 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 LINC00173Q6ZV60 143 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 MRPL53Q96EL3 112 aaKnown RBP3.69□□□□□ -1.82
CAST-201ENST00000309190 NDFIP1Q9BT67 221 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 SHANK2-AS3Q9BTD1 123 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 AGPAT4-IT1Q9H0P7 198 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 TRAV25A0A0B4J276 109 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 NCR2O95944 276 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 HIST1H1EP10412 219 aaKnown RBP3.69□□□□□ -1.82
CAST-201ENST00000309190 COX19Q49B96 90 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 SPATA45Q537H7 98 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 TRGV9Q99603 122 aa3.69□□□□□ -1.82
CAST-201ENST00000309190 MEGF8Q7Z7M0 2845 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 TRAV30A0A087WSZ9 112 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 TRAV9-2A0A087WT02 112 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 FAM231BA6NCW3 169 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 PEX7O00628 323 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 HLA-DQA1P01909 254 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 EVI2AP22794 236 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 TMEM190Q8WZ59 177 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 TRAV26-2A0A0B4J265 109 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 IGHV3-38A0A0C4DH36 116 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 WI2-2373I1.2A0A1W2PRP0 233 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 FAM223BA6NKX1 122 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 CRIP1P50238 77 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 FAM223AQ8IWN6 122 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 MCRIP2Q9BUT9 160 aaKnown RBP3.68□□□□□ -1.82
CAST-201ENST00000309190 EPDR1Q9UM22 224 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 PAM16Q9Y3D7 125 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 TRGV2A0A075B6R0 118 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms