RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 ZNF876PQ49A33 203 aa17.34■□□□□ 0.37
HOXC9-201ENST00000303450 MUC4Q99102 2169 aa17.34■□□□□ 0.37
HOXC9-201ENST00000303450 RPL23P62829 140 aaKnown RBP17.33■□□□□ 0.37
HOXC9-201ENST00000303450 ADIRFQ15847 76 aa17.33■□□□□ 0.37
HOXC9-201ENST00000303450 CEMP1Q6PRD7 247 aaPredicted RBP17.33■□□□□ 0.37
HOXC9-201ENST00000303450 FAM231DQ6ZW35 169 aa17.33■□□□□ 0.37
HOXC9-201ENST00000303450 C18orf15Q96N68 181 aa17.32■□□□□ 0.36
HOXC9-201ENST00000303450 RPP21Q9H633 154 aaKnown RBP17.32■□□□□ 0.36
HOXC9-201ENST00000303450 PHLDA3Q9Y5J5 127 aa17.32■□□□□ 0.36
HOXC9-201ENST00000303450 CSMD3Q7Z407 3707 aa17.32■□□□□ 0.36
HOXC9-201ENST00000303450 GATCO43716 136 aaKnown RBP17.31■□□□□ 0.36
HOXC9-201ENST00000303450 CASC10Q5T4H9 136 aa17.31■□□□□ 0.36
HOXC9-201ENST00000303450 MED14OSP0DP75 135 aa17.31■□□□□ 0.36
HOXC9-201ENST00000303450 GZMBP10144 247 aa17.31■□□□□ 0.36
HOXC9-201ENST00000303450 PTH2Q96A98 100 aa17.31■□□□□ 0.36
HOXC9-201ENST00000303450 SCRT2Q9NQ03 307 aa17.31■□□□□ 0.36
HOXC9-201ENST00000303450 KLK5Q9Y337 293 aaPredicted RBP17.31■□□□□ 0.36
HOXC9-201ENST00000303450 F5H768 121 aa17.3■□□□□ 0.36
HOXC9-201ENST00000303450 ISOC2Q96AB3 205 aa17.3■□□□□ 0.36
HOXC9-201ENST00000303450 SYT8Q8NBV8 401 aa17.29■□□□□ 0.36
HOXC9-201ENST00000303450 OSTCQ9NRP0 149 aa17.29■□□□□ 0.36
HOXC9-201ENST00000303450 C15orf54Q8N8G6 183 aa17.28■□□□□ 0.36
HOXC9-201ENST00000303450 NDUFAF3Q9BU61 184 aa17.28■□□□□ 0.36
HOXC9-201ENST00000303450 TPPP3Q9BW30 176 aa17.28■□□□□ 0.36
HOXC9-201ENST00000303450 TMEM218A2RU14 115 aa17.27■□□□□ 0.36
HOXC9-201ENST00000303450 IGHV3-53P01767 116 aa17.27■□□□□ 0.36
HOXC9-201ENST00000303450 OR5AL1P0C617 328 aa17.27■□□□□ 0.36
HOXC9-201ENST00000303450 FER1L6-AS1Q8NA97 138 aa17.27■□□□□ 0.36
HOXC9-201ENST00000303450 SFRP2Q96HF1 295 aa17.27■□□□□ 0.36
HOXC9-201ENST00000303450 SSBP4Q9BWG4 385 aaPredicted RBP17.27■□□□□ 0.36
HOXC9-201ENST00000303450 M0R381 172 aa17.26■□□□□ 0.35
HOXC9-201ENST00000303450 SNAI2O43623 268 aa17.26■□□□□ 0.35
HOXC9-201ENST00000303450 PIK3CD-AS1Q5SR53 167 aa17.26■□□□□ 0.35
HOXC9-201ENST00000303450 DMRTA1Q5VZB9 504 aa17.26■□□□□ 0.35
HOXC9-201ENST00000303450 ZFP82Q8N141 532 aa17.26■□□□□ 0.35
HOXC9-201ENST00000303450 OR4C5Q8NGB2 326 aa17.26■□□□□ 0.35
HOXC9-201ENST00000303450 TRAV4A0A0B4J268 109 aa17.26■□□□□ 0.35
HOXC9-201ENST00000303450 IGLL5B9A064 214 aa17.26■□□□□ 0.35
HOXC9-201ENST00000303450 IGLC6P0CF74 106 aa17.26■□□□□ 0.35
HOXC9-201ENST00000303450 STARD9Q9P2P6 4700 aa17.25■□□□□ 0.35
HOXC9-201ENST00000303450 A0A1W2PPQ1 181 aa17.25■□□□□ 0.35
HOXC9-201ENST00000303450 A8MWL6 223 aa17.25■□□□□ 0.35
HOXC9-201ENST00000303450 F8W036 122 aa17.25■□□□□ 0.35
HOXC9-201ENST00000303450 CT83Q5H943 113 aa17.25■□□□□ 0.35
HOXC9-201ENST00000303450 OR10AG1Q8NH19 301 aa17.25■□□□□ 0.35
HOXC9-201ENST00000303450 MUC21A0A0G2JKD1 596 aa17.24■□□□□ 0.35
HOXC9-201ENST00000303450 MUC21A0A140T8X8 626 aa17.24■□□□□ 0.35
HOXC9-201ENST00000303450 HOXA5P20719 270 aa17.24■□□□□ 0.35
HOXC9-201ENST00000303450 SPANXN1Q5VSR9 72 aa17.24■□□□□ 0.35
HOXC9-201ENST00000303450 POM121L12Q8N7R1 296 aa17.24■□□□□ 0.35
HOXC9-201ENST00000303450 OR10G8Q8NGN5 311 aa17.24■□□□□ 0.35
HOXC9-201ENST00000303450 ZNF479Q96JC4 524 aa17.24■□□□□ 0.35
HOXC9-201ENST00000303450 SSTP61278 116 aa17.23■□□□□ 0.35
HOXC9-201ENST00000303450 PNRC1Q12796 327 aaPredicted RBP17.23■□□□□ 0.35
HOXC9-201ENST00000303450 A8MWV9 139 aa17.22■□□□□ 0.35
HOXC9-201ENST00000303450 F2Z2F3 143 aa17.22■□□□□ 0.35
HOXC9-201ENST00000303450 RS1O15537 224 aa17.22■□□□□ 0.35
HOXC9-201ENST00000303450 CFAP126Q5VTH2 177 aa17.22■□□□□ 0.35
HOXC9-201ENST00000303450 FAM210BQ96KR6 192 aa17.22■□□□□ 0.35
HOXC9-201ENST00000303450 IGHV4-4A0A075B6R2 117 aa17.21■□□□□ 0.35
HOXC9-201ENST00000303450 TRGV4A0A0C4DH28 118 aa17.21■□□□□ 0.35
HOXC9-201ENST00000303450 ADCYAP1P18509 176 aa17.21■□□□□ 0.35
HOXC9-201ENST00000303450 LYZL1Q6UWQ5 148 aa17.21■□□□□ 0.35
HOXC9-201ENST00000303450 V9GYV3 84 aa17.21■□□□□ 0.35
HOXC9-201ENST00000303450 TMEM88Q6PEY1 159 aa17.21■□□□□ 0.34
HOXC9-201ENST00000303450 SEC11CQ9BY50 192 aa17.21■□□□□ 0.34
HOXC9-201ENST00000303450 NACAE9PAV3 2078 aa17.2■□□□□ 0.34
HOXC9-201ENST00000303450 NXPH4O95158 308 aa17.2■□□□□ 0.34
HOXC9-201ENST00000303450 FHL2Q14192 279 aa17.2■□□□□ 0.34
HOXC9-201ENST00000303450 TSKUQ8WUA8 353 aa17.2■□□□□ 0.34
HOXC9-201ENST00000303450 GTSF1Q8WW33 167 aa17.2■□□□□ 0.34
HOXC9-201ENST00000303450 JPT2Q9H910 190 aa17.2■□□□□ 0.34
HOXC9-201ENST00000303450 CIDEAO60543 219 aa17.19■□□□□ 0.34
HOXC9-201ENST00000303450 CACNG7P62955 275 aa17.19■□□□□ 0.34
HOXC9-201ENST00000303450 TENM2Q9NT68 2774 aa17.19■□□□□ 0.34
HOXC9-201ENST00000303450 DYNC2H1Q8NCM8 4307 aaKnown RBP17.18■□□□□ 0.34
HOXC9-201ENST00000303450 TRAV26-1A0A087WT03 109 aa17.18■□□□□ 0.34
HOXC9-201ENST00000303450 IGHV3-73A0A0B4J1V6 119 aa17.18■□□□□ 0.34
HOXC9-201ENST00000303450 CTRLP40313 264 aa17.18■□□□□ 0.34
HOXC9-201ENST00000303450 SLAQ13239 276 aa17.18■□□□□ 0.34
HOXC9-201ENST00000303450 GFRA4Q9GZZ7 299 aa17.18■□□□□ 0.34
HOXC9-201ENST00000303450 HHLA3Q9XRX5 114 aa17.18■□□□□ 0.34
HOXC9-201ENST00000303450 TCTAP57738 103 aa17.17■□□□□ 0.34
HOXC9-201ENST00000303450 PRO0255Q9UI72 69 aa17.17■□□□□ 0.34
HOXC9-201ENST00000303450 A0A0J9YY99 117 aa17.16■□□□□ 0.34
HOXC9-201ENST00000303450 SAMD10Q9BYL1 202 aa17.16■□□□□ 0.34
HOXC9-201ENST00000303450 FAM231BA6NCW3 169 aa17.16■□□□□ 0.34
HOXC9-201ENST00000303450 FOXA3P55318 350 aaPredicted RBP17.16■□□□□ 0.34
HOXC9-201ENST00000303450 FAM74A4Q5TZK3 123 aa17.16■□□□□ 0.34
HOXC9-201ENST00000303450 WDR73Q6P4I2 378 aa17.16■□□□□ 0.34
HOXC9-201ENST00000303450 ZFP2Q6ZN57 461 aa17.16■□□□□ 0.34
HOXC9-201ENST00000303450 PGLYRP4Q96LB8 373 aa17.16■□□□□ 0.34
HOXC9-201ENST00000303450 A0A087WWL8 130 aa17.15■□□□□ 0.34
HOXC9-201ENST00000303450 HIGD1CA8MV81 97 aa17.15■□□□□ 0.34
HOXC9-201ENST00000303450 PPP1R2P9O14990 202 aa17.15■□□□□ 0.34
HOXC9-201ENST00000303450 APLNQ9ULZ1 77 aa17.15■□□□□ 0.34
HOXC9-201ENST00000303450 RHODO00212 210 aa17.14■□□□□ 0.33
HOXC9-201ENST00000303450 PAX4O43316 350 aa17.14■□□□□ 0.33
HOXC9-201ENST00000303450 MT-ND4LP03901 98 aa17.14■□□□□ 0.33
HOXC9-201ENST00000303450 NTF3P20783 257 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms