RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 MED13LQ71F56 2210 aa12.87□□□□□ -0.35
SNAPC4-201ENST00000298532 LHBP01229 141 aa12.86□□□□□ -0.35
SNAPC4-201ENST00000298532 NXPH4O95158 308 aa12.86□□□□□ -0.35
SNAPC4-201ENST00000298532 DAZAP2Q15038 168 aaPredicted RBP12.86□□□□□ -0.35
SNAPC4-201ENST00000298532 K7EIM0 57 aa12.86□□□□□ -0.35
SNAPC4-201ENST00000298532 SPATA12Q7Z6I5 190 aa12.86□□□□□ -0.35
SNAPC4-201ENST00000298532 RPL39LQ96EH5 51 aaKnown RBP12.86□□□□□ -0.35
SNAPC4-201ENST00000298532 DSCR8Q96T75 97 aa12.86□□□□□ -0.35
SNAPC4-201ENST00000298532 IGKV1OR2-108A0A075B7D4 117 aa12.85□□□□□ -0.35
SNAPC4-201ENST00000298532 DEFB113Q30KQ7 82 aa12.85□□□□□ -0.35
SNAPC4-201ENST00000298532 ATP6V0E2Q8NHE4 81 aa12.85□□□□□ -0.35
SNAPC4-201ENST00000298532 Q9H8V8 135 aa12.85□□□□□ -0.35
SNAPC4-201ENST00000298532 CTSZQ9UBR2 303 aa12.85□□□□□ -0.35
SNAPC4-201ENST00000298532 TCTEX1D4Q5JR98 221 aa12.85□□□□□ -0.35
SNAPC4-201ENST00000298532 MUSTN1Q8IVN3 82 aa12.85□□□□□ -0.35
SNAPC4-201ENST00000298532 C2orf16Q68DN1 1984 aa12.84□□□□□ -0.35
SNAPC4-201ENST00000298532 F6UB75 175 aa12.84□□□□□ -0.35
SNAPC4-201ENST00000298532 ODF1Q14990 250 aa12.84□□□□□ -0.35
SNAPC4-201ENST00000298532 E9PLD3 99 aa12.83□□□□□ -0.35
SNAPC4-201ENST00000298532 LINC01619G3V211 115 aa12.83□□□□□ -0.35
SNAPC4-201ENST00000298532 GTF3C1Q12789 2109 aa12.83□□□□□ -0.36
SNAPC4-201ENST00000298532 RS1O15537 224 aa12.83□□□□□ -0.36
SNAPC4-201ENST00000298532 ZFP2Q6ZN57 461 aa12.83□□□□□ -0.36
SNAPC4-201ENST00000298532 ICOSQ9Y6W8 199 aa12.83□□□□□ -0.36
SNAPC4-201ENST00000298532 PLCE1Q9P212 2302 aa12.83□□□□□ -0.36
SNAPC4-201ENST00000298532 CTRLP40313 264 aa12.83□□□□□ -0.36
SNAPC4-201ENST00000298532 TRBV6-1A0A0K0K1D8 114 aa12.83□□□□□ -0.36
SNAPC4-201ENST00000298532 MED13Q9UHV7 2174 aa12.83□□□□□ -0.36
SNAPC4-201ENST00000298532 C19orf71A6NCJ1 209 aa12.82□□□□□ -0.36
SNAPC4-201ENST00000298532 H3BUA1 57 aa12.82□□□□□ -0.36
SNAPC4-201ENST00000298532 HERV-K104P63124 156 aa12.82□□□□□ -0.36
SNAPC4-201ENST00000298532 CFHR3Q02985 330 aa12.82□□□□□ -0.36
SNAPC4-201ENST00000298532 YPEL4Q96NS1 127 aa12.82□□□□□ -0.36
SNAPC4-201ENST00000298532 TRAV26-1A0A087WT03 109 aa12.82□□□□□ -0.36
SNAPC4-201ENST00000298532 COL4A4P53420 1690 aaPredicted RBP12.82□□□□□ -0.36
SNAPC4-201ENST00000298532 DENND4CQ5VZ89 1909 aa12.82□□□□□ -0.36
SNAPC4-201ENST00000298532 A0A1B0GXF2 115 aa12.81□□□□□ -0.36
SNAPC4-201ENST00000298532 SUMO4Q6EEV6 95 aa12.81□□□□□ -0.36
SNAPC4-201ENST00000298532 A0A0J9YXV3 536 aa12.81□□□□□ -0.36
SNAPC4-201ENST00000298532 ORMDL1Q9P0S3 153 aa12.81□□□□□ -0.36
SNAPC4-201ENST00000298532 ATOX1O00244 68 aa12.81□□□□□ -0.36
SNAPC4-201ENST00000298532 CDK2AP2O75956 126 aa12.81□□□□□ -0.36
SNAPC4-201ENST00000298532 ODF3L1Q8IXM7 274 aa12.81□□□□□ -0.36
SNAPC4-201ENST00000298532 IGLV11-55A0A075B6I3 123 aa12.81□□□□□ -0.36
SNAPC4-201ENST00000298532 RBM3P98179 157 aaKnown RBP12.81□□□□□ -0.36
SNAPC4-201ENST00000298532 A0A0B4J2C4 111 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 ZNF561-AS1K7EIQ3 104 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 SPRY2O43597 315 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 TMEM258P61165 79 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 PRB1P04280 392 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 PLXNB3Q9ULL4 1909 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 FAM236AA0A1B0GUQ0 79 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 FAM236BA0A1B0GV22 79 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 P0C879 139 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 SLC25A29Q8N8R3 303 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 FBXL19-AS1Q494R0 122 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 MRAPQ8TCY5 172 aa12.79□□□□□ -0.36
SNAPC4-201ENST00000298532 TOMM6Q96B49 74 aa12.79□□□□□ -0.36
SNAPC4-201ENST00000298532 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.79□□□□□ -0.36
SNAPC4-201ENST00000298532 IGKV2-29A2NJV5 120 aaPredicted RBP12.79□□□□□ -0.36
SNAPC4-201ENST00000298532 CTSGP08311 255 aa12.79□□□□□ -0.36
SNAPC4-201ENST00000298532 SPRNQ5BIV9 151 aa12.79□□□□□ -0.36
SNAPC4-201ENST00000298532 NPBQ8NG41 125 aa12.79□□□□□ -0.36
SNAPC4-201ENST00000298532 A0A1W2PNU3 283 aaPredicted RBP12.79□□□□□ -0.36
SNAPC4-201ENST00000298532 BAALCQ8WXS3 180 aa12.78□□□□□ -0.36
SNAPC4-201ENST00000298532 TNRC6AQ8NDV7 1962 aaKnown RBP12.78□□□□□ -0.36
SNAPC4-201ENST00000298532 TRBV10-2A0A0K0K1G8 114 aa12.78□□□□□ -0.36
SNAPC4-201ENST00000298532 BUB3O43684 328 aa12.78□□□□□ -0.36
SNAPC4-201ENST00000298532 WI2-2373I1.2A0A1W2PRP0 233 aa12.78□□□□□ -0.36
SNAPC4-201ENST00000298532 H0YGX0 51 aa12.78□□□□□ -0.36
SNAPC4-201ENST00000298532 H3BT86 120 aa12.78□□□□□ -0.36
SNAPC4-201ENST00000298532 IGFBPL1Q8WX77 278 aa12.78□□□□□ -0.36
SNAPC4-201ENST00000298532 ZNF503Q96F45 646 aa12.78□□□□□ -0.36
SNAPC4-201ENST00000298532 TRAV25A0A0B4J276 109 aa12.77□□□□□ -0.36
SNAPC4-201ENST00000298532 IGLV2-8P01709 118 aa12.77□□□□□ -0.37
SNAPC4-201ENST00000298532 RITA1Q96K30 269 aa12.77□□□□□ -0.37
SNAPC4-201ENST00000298532 TIMM17AQ99595 171 aa12.77□□□□□ -0.37
SNAPC4-201ENST00000298532 J3KT08 172 aa12.77□□□□□ -0.37
SNAPC4-201ENST00000298532 PIFOQ8TCI5 191 aa12.77□□□□□ -0.37
SNAPC4-201ENST00000298532 ADORA2A-AS1P86434 159 aa12.76□□□□□ -0.37
SNAPC4-201ENST00000298532 ARHGAP21Q5T5U3 1957 aa12.76□□□□□ -0.37
SNAPC4-201ENST00000298532 MRPL36Q9P0J6 103 aaKnown RBP12.76□□□□□ -0.37
SNAPC4-201ENST00000298532 CITED2Q99967 270 aaPredicted RBP12.76□□□□□ -0.37
SNAPC4-201ENST00000298532 COL4A3Q01955 1670 aa12.76□□□□□ -0.37
SNAPC4-201ENST00000298532 KIF26AQ9ULI4 1882 aaPredicted RBP12.76□□□□□ -0.37
SNAPC4-201ENST00000298532 CRYGCP07315 174 aa12.76□□□□□ -0.37
SNAPC4-201ENST00000298532 IGHV7-81A0A0B4J1V7 117 aa12.75□□□□□ -0.37
SNAPC4-201ENST00000298532 A0A1B0GX51 115 aa12.75□□□□□ -0.37
SNAPC4-201ENST00000298532 ELANEP08246 267 aa12.75□□□□□ -0.37
SNAPC4-201ENST00000298532 ZNF295-AS1Q8N0V1 137 aa12.75□□□□□ -0.37
SNAPC4-201ENST00000298532 C11orf86A6NJI1 115 aa12.75□□□□□ -0.37
SNAPC4-201ENST00000298532 IGLV2-23P01705 113 aa12.75□□□□□ -0.37
SNAPC4-201ENST00000298532 NKAPP1Q8N9T2 125 aa12.74□□□□□ -0.37
SNAPC4-201ENST00000298532 HOXB4P17483 251 aaPredicted RBP12.74□□□□□ -0.37
SNAPC4-201ENST00000298532 PRAC2D3DTV9 90 aa12.74□□□□□ -0.37
SNAPC4-201ENST00000298532 BDP1A6H8Y1 2624 aa12.74□□□□□ -0.37
SNAPC4-201ENST00000298532 TEX22C9J3V5 150 aa12.73□□□□□ -0.37
SNAPC4-201ENST00000298532 RPL39P62891 51 aaKnown RBP12.73□□□□□ -0.37
SNAPC4-201ENST00000298532 GDF5OSQ5U4N7 250 aa12.73□□□□□ -0.37
SNAPC4-201ENST00000298532 C9orf47Q6ZRZ4 202 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms