RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 U3KQE9 123 aa11.91□□□□□ -0.5
SHROOM4-201ENST00000289292 DOCK10Q96BY6 2186 aa11.91□□□□□ -0.5
SHROOM4-201ENST00000289292 ZNF503Q96F45 646 aa11.91□□□□□ -0.5
SHROOM4-201ENST00000289292 Q96MF0 132 aa11.91□□□□□ -0.5
SHROOM4-201ENST00000289292 SPATA12Q7Z6I5 190 aa11.91□□□□□ -0.5
SHROOM4-201ENST00000289292 BAALCQ8WXS3 180 aa11.91□□□□□ -0.5
SHROOM4-201ENST00000289292 HOXD3P31249 432 aaPredicted RBP11.91□□□□□ -0.5
SHROOM4-201ENST00000289292 ZFP2Q6ZN57 461 aa11.91□□□□□ -0.5
SHROOM4-201ENST00000289292 ICOSQ9Y6W8 199 aa11.91□□□□□ -0.5
SHROOM4-201ENST00000289292 IGHV7-81A0A0B4J1V7 117 aa11.9□□□□□ -0.5
SHROOM4-201ENST00000289292 CDK2AP2O75956 126 aa11.9□□□□□ -0.5
SHROOM4-201ENST00000289292 DAD1P61803 113 aa11.9□□□□□ -0.5
SHROOM4-201ENST00000289292 CRYGCP07315 174 aa11.9□□□□□ -0.5
SHROOM4-201ENST00000289292 C8orf31Q8N9H6 132 aa11.9□□□□□ -0.5
SHROOM4-201ENST00000289292 PSCAO43653 123 aa11.9□□□□□ -0.5
SHROOM4-201ENST00000289292 DEFB121Q5J5C9 76 aa11.9□□□□□ -0.5
SHROOM4-201ENST00000289292 GDF5OSQ5U4N7 250 aa11.9□□□□□ -0.5
SHROOM4-201ENST00000289292 A0A0J9YXV3 536 aa11.89□□□□□ -0.51
SHROOM4-201ENST00000289292 WISP2O76076 250 aa11.89□□□□□ -0.51
SHROOM4-201ENST00000289292 IGLV11-55A0A075B6I3 123 aa11.89□□□□□ -0.51
SHROOM4-201ENST00000289292 CTSGP08311 255 aa11.89□□□□□ -0.51
SHROOM4-201ENST00000289292 Q6ZQT7 251 aa11.89□□□□□ -0.51
SHROOM4-201ENST00000289292 SPTA1P02549 2419 aa11.89□□□□□ -0.51
SHROOM4-201ENST00000289292 TEX22C9J3V5 150 aa11.89□□□□□ -0.51
SHROOM4-201ENST00000289292 TEN1Q86WV5 123 aa11.89□□□□□ -0.51
SHROOM4-201ENST00000289292 IGHV4-59P01825 116 aa11.89□□□□□ -0.51
SHROOM4-201ENST00000289292 IGHV4-4A0A075B6R2 117 aa11.88□□□□□ -0.51
SHROOM4-201ENST00000289292 LINC00322Q6ZN03 302 aaPredicted RBP11.88□□□□□ -0.51
SHROOM4-201ENST00000289292 ZNF295-AS1Q8N0V1 137 aa11.88□□□□□ -0.51
SHROOM4-201ENST00000289292 INTS1Q8N201 2190 aaKnown RBP11.88□□□□□ -0.51
SHROOM4-201ENST00000289292 PRB2P02812 416 aaPredicted RBP11.88□□□□□ -0.51
SHROOM4-201ENST00000289292 RHOHQ15669 191 aa11.88□□□□□ -0.51
SHROOM4-201ENST00000289292 PLA2G2CQ5R387 149 aa11.88□□□□□ -0.51
SHROOM4-201ENST00000289292 SP5Q6BEB4 398 aaPredicted RBP11.88□□□□□ -0.51
SHROOM4-201ENST00000289292 A0A0J9YY99 117 aa11.88□□□□□ -0.51
SHROOM4-201ENST00000289292 NPBQ8NG41 125 aa11.88□□□□□ -0.51
SHROOM4-201ENST00000289292 ROS1P08922 2347 aa11.88□□□□□ -0.51
SHROOM4-201ENST00000289292 PKDREJQ9NTG1 2253 aa11.87□□□□□ -0.51
SHROOM4-201ENST00000289292 TNRC6BQ9UPQ9 1833 aaKnown RBP11.87□□□□□ -0.51
SHROOM4-201ENST00000289292 ANGP03950 147 aaKnown RBP11.87□□□□□ -0.51
SHROOM4-201ENST00000289292 CLEC2BQ92478 149 aa11.87□□□□□ -0.51
SHROOM4-201ENST00000289292 WI2-2373I1.2A0A1W2PRP0 233 aa11.87□□□□□ -0.51
SHROOM4-201ENST00000289292 Q71RC1 249 aaPredicted RBP11.87□□□□□ -0.51
SHROOM4-201ENST00000289292 SLURP1P55000 103 aa11.87□□□□□ -0.51
SHROOM4-201ENST00000289292 CRIP3Q6Q6R5 217 aa11.87□□□□□ -0.51
SHROOM4-201ENST00000289292 DKK4Q9UBT3 224 aa11.87□□□□□ -0.51
SHROOM4-201ENST00000289292 IGHV4-38-2P0DP08 117 aa11.87□□□□□ -0.51
SHROOM4-201ENST00000289292 TNRC6AQ8NDV7 1962 aaKnown RBP11.86□□□□□ -0.51
SHROOM4-201ENST00000289292 DEFB112Q30KQ8 113 aa11.86□□□□□ -0.51
SHROOM4-201ENST00000289292 C5orf38Q86SI9 138 aa11.86□□□□□ -0.51
SHROOM4-201ENST00000289292 LINC01620Q4KN68 170 aa11.86□□□□□ -0.51
SHROOM4-201ENST00000289292 C1orf43Q9BWL3 253 aa11.86□□□□□ -0.51
SHROOM4-201ENST00000289292 C2orf70A6NJV1 201 aa11.86□□□□□ -0.51
SHROOM4-201ENST00000289292 C2orf16Q68DN1 1984 aa11.86□□□□□ -0.51
SHROOM4-201ENST00000289292 NUP210LQ5VU65 1888 aa11.85□□□□□ -0.51
SHROOM4-201ENST00000289292 NKAPP1Q8N9T2 125 aa11.85□□□□□ -0.51
SHROOM4-201ENST00000289292 DEFB105AQ8NG35 78 aa11.85□□□□□ -0.51
SHROOM4-201ENST00000289292 RNF183Q96D59 192 aa11.85□□□□□ -0.51
SHROOM4-201ENST00000289292 SPANXDQ9BXN6 97 aa11.85□□□□□ -0.51
SHROOM4-201ENST00000289292 CENPVL3A0A0U1RRI6 287 aa11.85□□□□□ -0.51
SHROOM4-201ENST00000289292 ODF1Q14990 250 aa11.85□□□□□ -0.51
SHROOM4-201ENST00000289292 MSMPQ1L6U9 139 aa11.85□□□□□ -0.51
SHROOM4-201ENST00000289292 TOMM6Q96B49 74 aa11.85□□□□□ -0.51
SHROOM4-201ENST00000289292 ARFGEF3Q5TH69 2177 aa11.85□□□□□ -0.51
SHROOM4-201ENST00000289292 A0A1B0GX51 115 aa11.85□□□□□ -0.51
SHROOM4-201ENST00000289292 IGLV2-8P01709 118 aa11.85□□□□□ -0.51
SHROOM4-201ENST00000289292 AJUBAQ96IF1 538 aa11.85□□□□□ -0.51
SHROOM4-201ENST00000289292 OPRPNQ99935 248 aaPredicted RBP11.85□□□□□ -0.51
SHROOM4-201ENST00000289292 BUB3O43684 328 aa11.84□□□□□ -0.51
SHROOM4-201ENST00000289292 RPL32P62910 135 aaKnown RBP11.84□□□□□ -0.51
SHROOM4-201ENST00000289292 ORMDL1Q9P0S3 153 aa11.84□□□□□ -0.51
SHROOM4-201ENST00000289292 HIGD1BQ9P298 99 aa11.84□□□□□ -0.51
SHROOM4-201ENST00000289292 BLCAPP62952 87 aa11.84□□□□□ -0.51
SHROOM4-201ENST00000289292 BRWD1-AS2P59051 145 aa11.84□□□□□ -0.51
SHROOM4-201ENST00000289292 C1orf229Q6ZS94 237 aaPredicted RBP11.84□□□□□ -0.51
SHROOM4-201ENST00000289292 TMEM131Q92545 1883 aa11.84□□□□□ -0.51
SHROOM4-201ENST00000289292 C19orf71A6NCJ1 209 aa11.83□□□□□ -0.52
SHROOM4-201ENST00000289292 GATA3P23771 443 aa11.83□□□□□ -0.52
SHROOM4-201ENST00000289292 IGKV1D-37A0A075B6S9 117 aa11.83□□□□□ -0.52
SHROOM4-201ENST00000289292 C16orf54Q6UWD8 224 aa11.83□□□□□ -0.52
SHROOM4-201ENST00000289292 SLC25A29Q8N8R3 303 aa11.83□□□□□ -0.52
SHROOM4-201ENST00000289292 A0A0B4J2C4 111 aa11.82□□□□□ -0.52
SHROOM4-201ENST00000289292 hADV29S1A0JD25 119 aa11.82□□□□□ -0.52
SHROOM4-201ENST00000289292 SHANK1Q9Y566 2161 aa11.82□□□□□ -0.52
SHROOM4-201ENST00000289292 ADAMTS9Q9P2N4 1935 aa11.82□□□□□ -0.52
SHROOM4-201ENST00000289292 C11orf86A6NJI1 115 aa11.82□□□□□ -0.52
SHROOM4-201ENST00000289292 MT-ATP8P03928 68 aa11.82□□□□□ -0.52
SHROOM4-201ENST00000289292 Q8N1Y9 231 aa11.82□□□□□ -0.52
SHROOM4-201ENST00000289292 YPEL4Q96NS1 127 aa11.82□□□□□ -0.52
SHROOM4-201ENST00000289292 Q8N9W7 124 aa11.82□□□□□ -0.52
SHROOM4-201ENST00000289292 DYSFO75923 2080 aa11.81□□□□□ -0.52
SHROOM4-201ENST00000289292 ACYP1P07311 99 aa11.81□□□□□ -0.52
SHROOM4-201ENST00000289292 SRSF2Q01130 221 aaKnown RBP11.81□□□□□ -0.52
SHROOM4-201ENST00000289292 USF3Q68DE3 2245 aa11.81□□□□□ -0.52
SHROOM4-201ENST00000289292 ZNF80P51504 273 aaPredicted RBP11.81□□□□□ -0.52
SHROOM4-201ENST00000289292 IGLV10-54A0A075B6I4 117 aa11.81□□□□□ -0.52
SHROOM4-201ENST00000289292 TRAV4A0A0B4J268 109 aa11.81□□□□□ -0.52
SHROOM4-201ENST00000289292 CTRLP40313 264 aa11.81□□□□□ -0.52
SHROOM4-201ENST00000289292 SEM1Q6ZVN7 128 aa11.81□□□□□ -0.52
SHROOM4-201ENST00000289292 TP53TG3Q9ULZ0 132 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms