RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 NDPQ00604 133 aa12.28□□□□□ -0.44
MAP1LC3B-201ENST00000268607 TAL2Q16559 108 aa12.28□□□□□ -0.44
MAP1LC3B-201ENST00000268607 ZNF575Q86XF7 245 aa12.28□□□□□ -0.44
MAP1LC3B-201ENST00000268607 PRR25Q96S07 402 aa12.28□□□□□ -0.44
MAP1LC3B-201ENST00000268607 IGLC6P0CF74 106 aa12.28□□□□□ -0.44
MAP1LC3B-201ENST00000268607 ZFAND6Q6FIF0 208 aa12.28□□□□□ -0.44
MAP1LC3B-201ENST00000268607 SMIM20Q8N5G0 67 aa12.28□□□□□ -0.44
MAP1LC3B-201ENST00000268607 RNF5Q99942 180 aa12.28□□□□□ -0.44
MAP1LC3B-201ENST00000268607 NHLRC4P0CG21 123 aaPredicted RBP12.27□□□□□ -0.44
MAP1LC3B-201ENST00000268607 PSMB2P49721 201 aa12.27□□□□□ -0.44
MAP1LC3B-201ENST00000268607 IGFL4Q6B9Z1 124 aa12.27□□□□□ -0.44
MAP1LC3B-201ENST00000268607 NXT2Q9NPJ8 142 aaKnown RBP12.27□□□□□ -0.44
MAP1LC3B-201ENST00000268607 MYO9AB2RTY4 2548 aa12.27□□□□□ -0.45
MAP1LC3B-201ENST00000268607 LINC01546A6NGU7 62 aa12.27□□□□□ -0.45
MAP1LC3B-201ENST00000268607 ORM1P02763 201 aa12.27□□□□□ -0.45
MAP1LC3B-201ENST00000268607 ZFP2Q6ZN57 461 aa12.27□□□□□ -0.45
MAP1LC3B-201ENST00000268607 DLX4Q92988 240 aaPredicted RBP12.27□□□□□ -0.45
MAP1LC3B-201ENST00000268607 MTORP42345 2549 aa12.27□□□□□ -0.45
MAP1LC3B-201ENST00000268607 TRBV7-3A0A075B6L6 115 aa12.26□□□□□ -0.45
MAP1LC3B-201ENST00000268607 HOXA3O43365 443 aaPredicted RBP12.26□□□□□ -0.45
MAP1LC3B-201ENST00000268607 ATP5LO75964 103 aa12.26□□□□□ -0.45
MAP1LC3B-201ENST00000268607 TEX29Q8N6K0 151 aa12.26□□□□□ -0.45
MAP1LC3B-201ENST00000268607 LOC107984156A0A0G2JMH3 177 aa12.26□□□□□ -0.45
MAP1LC3B-201ENST00000268607 J3QKU1 62 aa12.26□□□□□ -0.45
MAP1LC3B-201ENST00000268607 ARL17AQ8IVW1 177 aa12.26□□□□□ -0.45
MAP1LC3B-201ENST00000268607 NPBQ8NG41 125 aa12.25□□□□□ -0.45
MAP1LC3B-201ENST00000268607 KIR2DL4Q99706 377 aa12.25□□□□□ -0.45
MAP1LC3B-201ENST00000268607 SETD2Q9BYW2 2564 aaPredicted RBP12.25□□□□□ -0.45
MAP1LC3B-201ENST00000268607 NDUFA3O95167 84 aa12.25□□□□□ -0.45
MAP1LC3B-201ENST00000268607 FAM110AQ9BQ89 295 aa12.25□□□□□ -0.45
MAP1LC3B-201ENST00000268607 PPDPFLQ8WWR9 84 aa12.24□□□□□ -0.45
MAP1LC3B-201ENST00000268607 IGHV3OR16-8A0A075B7F1 116 aa12.24□□□□□ -0.45
MAP1LC3B-201ENST00000268607 IGHV3-35A0A0C4DH35 117 aa12.24□□□□□ -0.45
MAP1LC3B-201ENST00000268607 HLA-DRB4P13762 266 aa12.24□□□□□ -0.45
MAP1LC3B-201ENST00000268607 HLA-DMBP28068 263 aa12.24□□□□□ -0.45
MAP1LC3B-201ENST00000268607 RPL32P62910 135 aaKnown RBP12.24□□□□□ -0.45
MAP1LC3B-201ENST00000268607 PDE6HQ13956 83 aa12.24□□□□□ -0.45
MAP1LC3B-201ENST00000268607 TMEM190Q8WZ59 177 aa12.24□□□□□ -0.45
MAP1LC3B-201ENST00000268607 FANCD2OSQ96PS1 177 aa12.24□□□□□ -0.45
MAP1LC3B-201ENST00000268607 HLA-DRB4X5D2U9 266 aa12.24□□□□□ -0.45
MAP1LC3B-201ENST00000268607 TRBV20-1A0A075B6N2 111 aa12.24□□□□□ -0.45
MAP1LC3B-201ENST00000268607 C10orf105Q8TEF2 133 aa12.24□□□□□ -0.45
MAP1LC3B-201ENST00000268607 LINC01549A6NIU2 74 aa12.23□□□□□ -0.45
MAP1LC3B-201ENST00000268607 SIRPDQ9H106 197 aa12.23□□□□□ -0.45
MAP1LC3B-201ENST00000268607 BRD3OSQ6XYD6 125 aa12.23□□□□□ -0.45
MAP1LC3B-201ENST00000268607 TEN1Q86WV5 123 aa12.23□□□□□ -0.45
MAP1LC3B-201ENST00000268607 Q8N8P6 123 aa12.23□□□□□ -0.45
MAP1LC3B-201ENST00000268607 MYOZ3Q8TDC0 251 aa12.23□□□□□ -0.45
MAP1LC3B-201ENST00000268607 COX8CQ7Z4L0 72 aa12.22□□□□□ -0.45
MAP1LC3B-201ENST00000268607 PIMREGQ9BSJ6 248 aa12.22□□□□□ -0.45
MAP1LC3B-201ENST00000268607 IGLV2-18A0A075B6J9 118 aa12.22□□□□□ -0.45
MAP1LC3B-201ENST00000268607 CCDC179H3BU77 68 aa12.22□□□□□ -0.45
MAP1LC3B-201ENST00000268607 BRI3O95415 125 aa12.22□□□□□ -0.45
MAP1LC3B-201ENST00000268607 AKAP9Q99996 3911 aa12.21□□□□□ -0.45
MAP1LC3B-201ENST00000268607 TRAV26-2A0A0B4J265 109 aa12.21□□□□□ -0.46
MAP1LC3B-201ENST00000268607 SAA4P35542 130 aa12.21□□□□□ -0.46
MAP1LC3B-201ENST00000268607 C1orf122Q6ZSJ8 110 aa12.21□□□□□ -0.46
MAP1LC3B-201ENST00000268607 A0A087WX48 190 aa12.2□□□□□ -0.46
MAP1LC3B-201ENST00000268607 ZNF688P0C7X2 276 aa12.2□□□□□ -0.46
MAP1LC3B-201ENST00000268607 CNFNQ9BYD5 112 aa12.2□□□□□ -0.46
MAP1LC3B-201ENST00000268607 H3BVH4 76 aa12.2□□□□□ -0.46
MAP1LC3B-201ENST00000268607 TGFAP01135 160 aa12.2□□□□□ -0.46
MAP1LC3B-201ENST00000268607 TRGV3P03979 118 aa12.2□□□□□ -0.46
MAP1LC3B-201ENST00000268607 ERCC8Q13216 396 aa12.2□□□□□ -0.46
MAP1LC3B-201ENST00000268607 LINC01559Q495D7 138 aa12.2□□□□□ -0.46
MAP1LC3B-201ENST00000268607 PSMG3-AS1Q96PY0 264 aa12.2□□□□□ -0.46
MAP1LC3B-201ENST00000268607 IGLV11-55A0A075B6I3 123 aa12.19□□□□□ -0.46
MAP1LC3B-201ENST00000268607 IGHV7-81A0A0B4J1V7 117 aa12.19□□□□□ -0.46
MAP1LC3B-201ENST00000268607 RNF223E7ERA6 249 aa12.19□□□□□ -0.46
MAP1LC3B-201ENST00000268607 Q8N6K4 173 aa12.19□□□□□ -0.46
MAP1LC3B-201ENST00000268607 AJUBAQ96IF1 538 aa12.19□□□□□ -0.46
MAP1LC3B-201ENST00000268607 CITED1Q99966 193 aa12.19□□□□□ -0.46
MAP1LC3B-201ENST00000268607 GAGE12JA6NER3 117 aa12.19□□□□□ -0.46
MAP1LC3B-201ENST00000268607 F8W735 103 aaPredicted RBP12.19□□□□□ -0.46
MAP1LC3B-201ENST00000268607 GAGE7O76087 117 aa12.19□□□□□ -0.46
MAP1LC3B-201ENST00000268607 IGHG4P01861 327 aa12.19□□□□□ -0.46
MAP1LC3B-201ENST00000268607 GAGE12FP0CL80 117 aa12.19□□□□□ -0.46
MAP1LC3B-201ENST00000268607 GAGE12GP0CL81 117 aa12.19□□□□□ -0.46
MAP1LC3B-201ENST00000268607 GAGE12IP0CL82 117 aa12.19□□□□□ -0.46
MAP1LC3B-201ENST00000268607 GAGE4Q13068 117 aa12.19□□□□□ -0.46
MAP1LC3B-201ENST00000268607 LAGE3Q14657 143 aa12.19□□□□□ -0.46
MAP1LC3B-201ENST00000268607 ECSCRQ19T08 205 aa12.19□□□□□ -0.46
MAP1LC3B-201ENST00000268607 MYMXA0A1B0GTQ4 84 aa12.18□□□□□ -0.46
MAP1LC3B-201ENST00000268607 FABP5P3A8MUU1 101 aa12.18□□□□□ -0.46
MAP1LC3B-201ENST00000268607 Q8N9W7 124 aa12.18□□□□□ -0.46
MAP1LC3B-201ENST00000268607 AVPP01185 164 aa12.18□□□□□ -0.46
MAP1LC3B-201ENST00000268607 NDUFV3P56181 108 aaKnown RBP12.18□□□□□ -0.46
MAP1LC3B-201ENST00000268607 MINOS1Q5TGZ0 78 aa12.18□□□□□ -0.46
MAP1LC3B-201ENST00000268607 MINOS1-NBL1R4GNA1 71 aa12.18□□□□□ -0.46
MAP1LC3B-201ENST00000268607 MFAP4P55083 255 aa12.17□□□□□ -0.46
MAP1LC3B-201ENST00000268607 C21orf62Q9NYP8 219 aa12.17□□□□□ -0.46
MAP1LC3B-201ENST00000268607 RHODO00212 210 aa12.17□□□□□ -0.46
MAP1LC3B-201ENST00000268607 SRD5A1P18405 259 aa12.17□□□□□ -0.46
MAP1LC3B-201ENST00000268607 PLNP26678 52 aa12.17□□□□□ -0.46
MAP1LC3B-201ENST00000268607 UBE2E1P51965 193 aa12.17□□□□□ -0.46
MAP1LC3B-201ENST00000268607 SMAD5-AS1Q9Y6J3 95 aa12.17□□□□□ -0.46
MAP1LC3B-201ENST00000268607 IGHV4-38-2P0DP08 117 aa12.16□□□□□ -0.46
MAP1LC3B-201ENST00000268607 GAGE2BQ13066 116 aa12.16□□□□□ -0.46
MAP1LC3B-201ENST00000268607 GAGE2EQ4V326 116 aa12.16□□□□□ -0.46
MAP1LC3B-201ENST00000268607 TMEM219Q86XT9 240 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms