RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 SERF1AO75920 110 aa12.01□□□□□ -0.49
TPM1-201ENST00000267996 AMBPP02760 352 aa12.01□□□□□ -0.49
TPM1-201ENST00000267996 SPANXN1Q5VSR9 72 aa12.01□□□□□ -0.49
TPM1-201ENST00000267996 WFDC9Q8NEX5 89 aa12.01□□□□□ -0.49
TPM1-201ENST00000267996 RNF185Q96GF1 192 aa12.01□□□□□ -0.49
TPM1-201ENST00000267996 S100A2P29034 98 aa12□□□□□ -0.49
TPM1-201ENST00000267996 MRPL51Q4U2R6 128 aaKnown RBP12□□□□□ -0.49
TPM1-201ENST00000267996 PRIMA1Q86XR5 153 aa12□□□□□ -0.49
TPM1-201ENST00000267996 C9orf85Q96MD7 179 aa12□□□□□ -0.49
TPM1-201ENST00000267996 C20orf144Q9BQM9 153 aa12□□□□□ -0.49
TPM1-201ENST00000267996 VWFP04275 2813 aa12□□□□□ -0.49
TPM1-201ENST00000267996 RAB4AP20338 218 aa12□□□□□ -0.49
TPM1-201ENST00000267996 IQCJQ1A5X6 159 aa12□□□□□ -0.49
TPM1-201ENST00000267996 Q8N1Y9 231 aa12□□□□□ -0.49
TPM1-201ENST00000267996 LINC00467Q9BRT7 94 aa12□□□□□ -0.49
TPM1-201ENST00000267996 ZNF747Q9BV97 191 aa12□□□□□ -0.49
TPM1-201ENST00000267996 PHLDA3Q9Y5J5 127 aa12□□□□□ -0.49
TPM1-201ENST00000267996 TIMM8BQ9Y5J9 83 aaPredicted RBP12□□□□□ -0.49
TPM1-201ENST00000267996 RCHY1Q96PM5 261 aa11.99□□□□□ -0.49
TPM1-201ENST00000267996 MUC4Q99102 2169 aa11.99□□□□□ -0.49
TPM1-201ENST00000267996 MAST4O15021 2626 aa11.98□□□□□ -0.49
TPM1-201ENST00000267996 FABP4P15090 132 aa11.98□□□□□ -0.49
TPM1-201ENST00000267996 EVI2AP22794 236 aa11.98□□□□□ -0.49
TPM1-201ENST00000267996 NOTCH3Q9UM47 2321 aa11.98□□□□□ -0.49
TPM1-201ENST00000267996 TRGV11A0A075B6L2 103 aa11.97□□□□□ -0.49
TPM1-201ENST00000267996 SPRY2O43597 315 aa11.97□□□□□ -0.49
TPM1-201ENST00000267996 INSP01308 110 aa11.97□□□□□ -0.49
TPM1-201ENST00000267996 SMIM15Q7Z3B0 74 aa11.97□□□□□ -0.49
TPM1-201ENST00000267996 ORMDL3Q8N138 153 aa11.97□□□□□ -0.49
TPM1-201ENST00000267996 TMEM18Q96B42 140 aa11.97□□□□□ -0.49
TPM1-201ENST00000267996 MCRIP2Q9BUT9 160 aaKnown RBP11.97□□□□□ -0.49
TPM1-201ENST00000267996 MDFICQ9P1T7 246 aa11.97□□□□□ -0.49
TPM1-201ENST00000267996 D6R8Y8 96 aa11.97□□□□□ -0.49
TPM1-201ENST00000267996 M0R381 172 aa11.97□□□□□ -0.49
TPM1-201ENST00000267996 PACRGQ96M98 296 aaPredicted RBP11.97□□□□□ -0.49
TPM1-201ENST00000267996 WFDC10AQ9H1F0 79 aa11.97□□□□□ -0.49
TPM1-201ENST00000267996 PPBPP02775 128 aa11.96□□□□□ -0.5
TPM1-201ENST00000267996 OR10D4PQ8NGN7 298 aa11.96□□□□□ -0.5
TPM1-201ENST00000267996 URB1-AS1Q96HZ7 61 aa11.96□□□□□ -0.5
TPM1-201ENST00000267996 WIPF1O43516 503 aa11.95□□□□□ -0.5
TPM1-201ENST00000267996 CKS2P33552 79 aa11.95□□□□□ -0.5
TPM1-201ENST00000267996 NUTF2P61970 127 aaKnown RBP11.95□□□□□ -0.5
TPM1-201ENST00000267996 NIT1Q86X76 327 aa11.95□□□□□ -0.5
TPM1-201ENST00000267996 PRELID3AQ96N28 172 aa11.95□□□□□ -0.5
TPM1-201ENST00000267996 CBY3A6NI87 242 aa11.94□□□□□ -0.5
TPM1-201ENST00000267996 GIG44P09565 113 aaPredicted RBP11.94□□□□□ -0.5
TPM1-201ENST00000267996 XCL2Q9UBD3 114 aa11.94□□□□□ -0.5
TPM1-201ENST00000267996 C1orf158Q8N1D5 194 aa11.94□□□□□ -0.5
TPM1-201ENST00000267996 AP1S3Q96PC3 154 aa11.94□□□□□ -0.5
TPM1-201ENST00000267996 LAMTOR2Q9Y2Q5 125 aa11.94□□□□□ -0.5
TPM1-201ENST00000267996 FBN1P35555 2871 aaKnown RBP11.93□□□□□ -0.5
TPM1-201ENST00000267996 SMKR1H3BMG3 65 aa11.93□□□□□ -0.5
TPM1-201ENST00000267996 LINC00518Q8N0U6 118 aa11.93□□□□□ -0.5
TPM1-201ENST00000267996 POM121L12Q8N7R1 296 aa11.93□□□□□ -0.5
TPM1-201ENST00000267996 CHCHD1Q96BP2 118 aaKnown RBP11.93□□□□□ -0.5
TPM1-201ENST00000267996 LINC01587Q99440 93 aa11.93□□□□□ -0.5
TPM1-201ENST00000267996 DPH3P1Q9H4G8 78 aa11.93□□□□□ -0.5
TPM1-201ENST00000267996 KIF25-AS1Q9Y6Z4 181 aa11.93□□□□□ -0.5
TPM1-201ENST00000267996 LINC00315P59091 139 aa11.92□□□□□ -0.5
TPM1-201ENST00000267996 MORN3Q6PF18 240 aaPredicted RBP11.92□□□□□ -0.5
TPM1-201ENST00000267996 SHISA2Q6UWI4 295 aa11.92□□□□□ -0.5
TPM1-201ENST00000267996 GAS8-AS1O95177 125 aa11.91□□□□□ -0.5
TPM1-201ENST00000267996 NCR2O95944 276 aa11.91□□□□□ -0.5
TPM1-201ENST00000267996 NPYP01303 97 aa11.91□□□□□ -0.5
TPM1-201ENST00000267996 LINC00614P0C842 121 aa11.91□□□□□ -0.5
TPM1-201ENST00000267996 SMIM6P0DI80 62 aa11.91□□□□□ -0.5
TPM1-201ENST00000267996 RNASEKQ6P5S7 137 aaKnown RBP11.91□□□□□ -0.5
TPM1-201ENST00000267996 GTSCR1Q86UQ5 136 aa11.91□□□□□ -0.5
TPM1-201ENST00000267996 DEFB125Q8N687 156 aa11.91□□□□□ -0.5
TPM1-201ENST00000267996 C14orf178Q8N769 122 aaPredicted RBP11.91□□□□□ -0.5
TPM1-201ENST00000267996 C3orf56Q8N813 242 aa11.91□□□□□ -0.5
TPM1-201ENST00000267996 SYT8Q8NBV8 401 aa11.91□□□□□ -0.5
TPM1-201ENST00000267996 TMEM158Q8WZ71 300 aa11.91□□□□□ -0.5
TPM1-201ENST00000267996 PTH2Q96A98 100 aa11.91□□□□□ -0.5
TPM1-201ENST00000267996 MRAP2Q96G30 205 aa11.91□□□□□ -0.5
TPM1-201ENST00000267996 TRRAPQ9Y4A5 3859 aa11.91□□□□□ -0.5
TPM1-201ENST00000267996 C11orf72Q8NBR9 251 aa11.91□□□□□ -0.5
TPM1-201ENST00000267996 SAMD10Q9BYL1 202 aa11.91□□□□□ -0.5
TPM1-201ENST00000267996 GSN-AS1Q9NRJ2 163 aa11.91□□□□□ -0.5
TPM1-201ENST00000267996 HSBP1O75506 76 aa11.9□□□□□ -0.5
TPM1-201ENST00000267996 PRM2P04554 102 aa11.9□□□□□ -0.5
TPM1-201ENST00000267996 IGLL1P15814 213 aa11.9□□□□□ -0.5
TPM1-201ENST00000267996 RPL35AP18077 110 aaKnown RBP11.9□□□□□ -0.5
TPM1-201ENST00000267996 ZNF415Q09FC8 603 aa11.9□□□□□ -0.5
TPM1-201ENST00000267996 NRACQ8N912 160 aa11.9□□□□□ -0.5
TPM1-201ENST00000267996 TNFRSF6BO95407 300 aa11.89□□□□□ -0.51
TPM1-201ENST00000267996 HTN1P15515 57 aa11.89□□□□□ -0.51
TPM1-201ENST00000267996 GATA1P15976 413 aaPredicted RBP11.89□□□□□ -0.51
TPM1-201ENST00000267996 AMTP48728 403 aa11.89□□□□□ -0.51
TPM1-201ENST00000267996 PYY3Q5JQD4 70 aa11.89□□□□□ -0.51
TPM1-201ENST00000267996 PIK3CD-AS1Q5SR53 167 aa11.89□□□□□ -0.51
TPM1-201ENST00000267996 C12orf54Q6X4T0 127 aa11.89□□□□□ -0.51
TPM1-201ENST00000267996 CSNK1G2-AS1Q8NCQ2 148 aa11.89□□□□□ -0.51
TPM1-201ENST00000267996 C1QTNF4Q9BXJ3 329 aa11.89□□□□□ -0.51
TPM1-201ENST00000267996 JPT2Q9H910 190 aa11.89□□□□□ -0.51
TPM1-201ENST00000267996 PRSS47A8MTI9 375 aa11.88□□□□□ -0.51
TPM1-201ENST00000267996 PMCHP20382 165 aa11.88□□□□□ -0.51
TPM1-201ENST00000267996 FAM19A2Q8N3H0 131 aa11.88□□□□□ -0.51
TPM1-201ENST00000267996 IFI27P40305 119 aaPredicted RBP11.87□□□□□ -0.51
TPM1-201ENST00000267996 ZNF876PQ49A33 203 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms