RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 C1orf147Q96MC9 270 aaPredicted RBP4.55□□□□□ -1.68
VCAN-201ENST00000265077 IGHV3-64A0A075B6Q5 118 aa4.55□□□□□ -1.68
VCAN-201ENST00000265077 RNF152Q8N8N0 203 aa4.55□□□□□ -1.68
VCAN-201ENST00000265077 RBAKDNA6NC62 111 aa4.55□□□□□ -1.68
VCAN-201ENST00000265077 MRPL51Q4U2R6 128 aaKnown RBP4.55□□□□□ -1.68
VCAN-201ENST00000265077 Q8TAT8 98 aa4.55□□□□□ -1.68
VCAN-201ENST00000265077 IGKV1D-17A0A075B6S4 117 aa4.54□□□□□ -1.68
VCAN-201ENST00000265077 TCL1BO95988 128 aa4.54□□□□□ -1.68
VCAN-201ENST00000265077 B3GALT5-AS1P59052 145 aa4.54□□□□□ -1.68
VCAN-201ENST00000265077 MSRB2Q9Y3D2 182 aa4.54□□□□□ -1.68
VCAN-201ENST00000265077 IGKV1-6A0A0C4DH72 117 aa4.54□□□□□ -1.68
VCAN-201ENST00000265077 COX7CP15954 63 aa4.54□□□□□ -1.68
VCAN-201ENST00000265077 DAD1P61803 113 aa4.54□□□□□ -1.68
VCAN-201ENST00000265077 TRPT1Q86TN4 253 aaKnown RBP4.54□□□□□ -1.68
VCAN-201ENST00000265077 WFDC11Q8NEX6 87 aa4.54□□□□□ -1.68
VCAN-201ENST00000265077 C10orf105Q8TEF2 133 aa4.54□□□□□ -1.68
VCAN-201ENST00000265077 TRAV13-2A0A0B4J235 113 aa4.54□□□□□ -1.68
VCAN-201ENST00000265077 GATA3P23771 443 aa4.54□□□□□ -1.68
VCAN-201ENST00000265077 CFAP126Q5VTH2 177 aa4.54□□□□□ -1.68
VCAN-201ENST00000265077 TP53TG3Q9ULZ0 132 aa4.54□□□□□ -1.68
VCAN-201ENST00000265077 ATP5EP56381 51 aaPredicted RBP4.54□□□□□ -1.68
VCAN-201ENST00000265077 FLNBO75369 2602 aaKnown RBP4.54□□□□□ -1.68
VCAN-201ENST00000265077 A0A0G2JRQ6 117 aa4.54□□□□□ -1.68
VCAN-201ENST00000265077 C2orf91Q6ZV80 131 aa4.54□□□□□ -1.68
VCAN-201ENST00000265077 LINC00311Q8N616 119 aa4.54□□□□□ -1.68
VCAN-201ENST00000265077 DAZ1Q9NQZ3 744 aaKnown RBP4.54□□□□□ -1.68
VCAN-201ENST00000265077 NDUFA4L2Q9NRX3 87 aa4.54□□□□□ -1.68
VCAN-201ENST00000265077 DNAH12Q6ZR08 3092 aa4.53□□□□□ -1.68
VCAN-201ENST00000265077 MBD3L4A6NDZ8 208 aaPredicted RBP4.53□□□□□ -1.68
VCAN-201ENST00000265077 MBD3L3A6NE82 208 aaPredicted RBP4.53□□□□□ -1.68
VCAN-201ENST00000265077 MBD3L5A6NJ08 208 aaPredicted RBP4.53□□□□□ -1.68
VCAN-201ENST00000265077 MBD3L2Q8NHZ7 208 aaPredicted RBP4.53□□□□□ -1.68
VCAN-201ENST00000265077 DPH3Q96FX2 82 aa4.53□□□□□ -1.68
VCAN-201ENST00000265077 C5orf63A6NC05 138 aa4.53□□□□□ -1.68
VCAN-201ENST00000265077 ZNF833PQ6ZTB9 187 aa4.53□□□□□ -1.68
VCAN-201ENST00000265077 IGLV3-1P01715 115 aa4.53□□□□□ -1.68
VCAN-201ENST00000265077 INSL3P51460 131 aa4.53□□□□□ -1.68
VCAN-201ENST00000265077 ZNF625Q96I27 306 aaPredicted RBP4.53□□□□□ -1.68
VCAN-201ENST00000265077 TRBV19A0A075B6N1 114 aa4.53□□□□□ -1.68
VCAN-201ENST00000265077 PRIMA1Q86XR5 153 aa4.53□□□□□ -1.68
VCAN-201ENST00000265077 IGKV1-16P04430 117 aa4.53□□□□□ -1.68
VCAN-201ENST00000265077 RPL35AP18077 110 aaKnown RBP4.53□□□□□ -1.68
VCAN-201ENST00000265077 VSIG2Q96IQ7 327 aa4.53□□□□□ -1.68
VCAN-201ENST00000265077 IGKV3D-7A0A0C4DH55 119 aa4.53□□□□□ -1.68
VCAN-201ENST00000265077 TEX49A0A1B0GTD5 131 aa4.53□□□□□ -1.68
VCAN-201ENST00000265077 LGALS9O00182 355 aa4.53□□□□□ -1.68
VCAN-201ENST00000265077 SERP2Q8N6R1 65 aa4.53□□□□□ -1.68
VCAN-201ENST00000265077 BAALCQ8WXS3 180 aa4.53□□□□□ -1.68
VCAN-201ENST00000265077 C1orf159Q96HA4 380 aa4.53□□□□□ -1.68
VCAN-201ENST00000265077 ICOSQ9Y6W8 199 aa4.53□□□□□ -1.68
VCAN-201ENST00000265077 TRAV4A0A0B4J268 109 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 J3QQQ9 107 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 PIFOQ8TCI5 191 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 LINC00526Q96FQ7 95 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 A0A0U1RRA0 63 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 IGHG3P01860 377 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 THAP8Q8NA92 274 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 SMIM26A0A096LP01 95 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 F8WEM9 126 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 RNF144BQ7Z419 303 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 FXYD5Q96DB9 178 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 BAALC-AS2P0C853 105 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 EFNA4P52798 201 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 ARTNQ5T4W7 220 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 J3QLI3 93 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 HTN3P15516 51 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 TEX36Q5VZQ5 186 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 F8WDY8 70 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 TFF1P04155 84 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 C2orf66Q6UXQ4 117 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 H3BRN7 92 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 NDUFA11Q86Y39 141 aa4.52□□□□□ -1.69
VCAN-201ENST00000265077 FAM110DQ8TAY7 271 aaPredicted RBP4.52□□□□□ -1.69
VCAN-201ENST00000265077 LOC107984640A0A0U1RRK4 108 aa4.51□□□□□ -1.69
VCAN-201ENST00000265077 SMIM2Q9BVW6 85 aa4.51□□□□□ -1.69
VCAN-201ENST00000265077 CHD6Q8TD26 2715 aa4.51□□□□□ -1.69
VCAN-201ENST00000265077 CDK2AP2O75956 126 aa4.51□□□□□ -1.69
VCAN-201ENST00000265077 RHOHQ15669 191 aa4.51□□□□□ -1.69
VCAN-201ENST00000265077 MRPL53Q96EL3 112 aaKnown RBP4.51□□□□□ -1.69
VCAN-201ENST00000265077 I3L3M4 83 aa4.51□□□□□ -1.69
VCAN-201ENST00000265077 A0A087WWL8 130 aa4.51□□□□□ -1.69
VCAN-201ENST00000265077 Q8N976 141 aa4.51□□□□□ -1.69
VCAN-201ENST00000265077 HS3ST6Q96QI5 342 aa4.51□□□□□ -1.69
VCAN-201ENST00000265077 DSCR8Q96T75 97 aa4.51□□□□□ -1.69
VCAN-201ENST00000265077 METRNQ9UJH8 293 aa4.51□□□□□ -1.69
VCAN-201ENST00000265077 Q0VFX4 171 aa4.51□□□□□ -1.69
VCAN-201ENST00000265077 NDUFA4O00483 81 aa4.51□□□□□ -1.69
VCAN-201ENST00000265077 PSMB8P28062 276 aa4.51□□□□□ -1.69
VCAN-201ENST00000265077 PRORYQ9H606 182 aa4.51□□□□□ -1.69
VCAN-201ENST00000265077 TRGV1A0A0A0MS02 117 aa4.51□□□□□ -1.69
VCAN-201ENST00000265077 C8orf49Q96NF6 230 aa4.51□□□□□ -1.69
VCAN-201ENST00000265077 B4DSR2 109 aa4.51□□□□□ -1.69
VCAN-201ENST00000265077 F6UB75 175 aa4.51□□□□□ -1.69
VCAN-201ENST00000265077 FRMD6-AS1P0C7T7 363 aa4.51□□□□□ -1.69
VCAN-201ENST00000265077 RPS28P62857 69 aaKnown RBP4.5□□□□□ -1.69
VCAN-201ENST00000265077 PRB3Q04118 309 aaPredicted RBP4.5□□□□□ -1.69
VCAN-201ENST00000265077 TP53TG1Q9Y2A0 90 aa4.5□□□□□ -1.69
VCAN-201ENST00000265077 C15orf65H3BRN8 121 aa4.5□□□□□ -1.69
VCAN-201ENST00000265077 IGFBPL1Q8WX77 278 aa4.5□□□□□ -1.69
VCAN-201ENST00000265077 PRDM6Q9NQX0 595 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms