RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 C8orf31Q8N9H6 132 aa13.85□□□□□ -0.19
NOTCH3-201ENST00000263388 IGLV1-44P01699 117 aa13.84□□□□□ -0.19
NOTCH3-201ENST00000263388 NPYP01303 97 aa13.84□□□□□ -0.19
NOTCH3-201ENST00000263388 IGLC1P0CG04 106 aa13.84□□□□□ -0.19
NOTCH3-201ENST00000263388 CRYGCP07315 174 aa13.84□□□□□ -0.19
NOTCH3-201ENST00000263388 SVIPQ8NHG7 77 aa13.84□□□□□ -0.19
NOTCH3-201ENST00000263388 FOXI2Q6ZQN5 318 aa13.83□□□□□ -0.19
NOTCH3-201ENST00000263388 BAALCQ8WXS3 180 aa13.83□□□□□ -0.19
NOTCH3-201ENST00000263388 DOPEY1Q5JWR5 2465 aa13.83□□□□□ -0.19
NOTCH3-201ENST00000263388 TEX48A0A1B0GUV7 120 aa13.83□□□□□ -0.19
NOTCH3-201ENST00000263388 NDUFB1O75438 58 aa13.83□□□□□ -0.19
NOTCH3-201ENST00000263388 UBE2BP63146 152 aa13.83□□□□□ -0.19
NOTCH3-201ENST00000263388 RNF152Q8N8N0 203 aa13.83□□□□□ -0.2
NOTCH3-201ENST00000263388 KAAG1Q9UBP8 84 aa13.83□□□□□ -0.2
NOTCH3-201ENST00000263388 B5MCH6 92 aa13.83□□□□□ -0.2
NOTCH3-201ENST00000263388 Q6ZR03 302 aa13.82□□□□□ -0.2
NOTCH3-201ENST00000263388 IGLV3-9A0A075B6K5 115 aa13.82□□□□□ -0.2
NOTCH3-201ENST00000263388 NXPH4O95158 308 aa13.82□□□□□ -0.2
NOTCH3-201ENST00000263388 SLC25A29Q8N8R3 303 aa13.82□□□□□ -0.2
NOTCH3-201ENST00000263388 SS18L2Q9UHA2 77 aa13.82□□□□□ -0.2
NOTCH3-201ENST00000263388 LOXP28300 417 aaPredicted RBP13.82□□□□□ -0.2
NOTCH3-201ENST00000263388 ZFYVE26Q68DK2 2539 aa13.82□□□□□ -0.2
NOTCH3-201ENST00000263388 IGHV3-38A0A0C4DH36 116 aa13.81□□□□□ -0.2
NOTCH3-201ENST00000263388 IGF2BP2-AS1Q96M15 143 aa13.81□□□□□ -0.2
NOTCH3-201ENST00000263388 IGKV1-39P01597 117 aa13.81□□□□□ -0.2
NOTCH3-201ENST00000263388 IGKV1D-39P04432 117 aa13.81□□□□□ -0.2
NOTCH3-201ENST00000263388 C12orf74Q32Q52 190 aa13.81□□□□□ -0.2
NOTCH3-201ENST00000263388 Q96MF0 132 aa13.81□□□□□ -0.2
NOTCH3-201ENST00000263388 LYPD6BQ8NI32 183 aa13.8□□□□□ -0.2
NOTCH3-201ENST00000263388 IGFBPL1Q8WX77 278 aa13.8□□□□□ -0.2
NOTCH3-201ENST00000263388 TPSG1Q9NRR2 321 aa13.8□□□□□ -0.2
NOTCH3-201ENST00000263388 DKK4Q9UBT3 224 aa13.8□□□□□ -0.2
NOTCH3-201ENST00000263388 A0A1B0GX51 115 aa13.8□□□□□ -0.2
NOTCH3-201ENST00000263388 Q6ZVH6 145 aa13.8□□□□□ -0.2
NOTCH3-201ENST00000263388 K7EN84 100 aa13.79□□□□□ -0.2
NOTCH3-201ENST00000263388 DKK2Q9UBU2 259 aa13.79□□□□□ -0.2
NOTCH3-201ENST00000263388 IGLV3-1P01715 115 aa13.79□□□□□ -0.2
NOTCH3-201ENST00000263388 DEFB105AQ8NG35 78 aa13.79□□□□□ -0.2
NOTCH3-201ENST00000263388 PROK2Q9HC23 129 aa13.78□□□□□ -0.2
NOTCH3-201ENST00000263388 C14orf132Q9NPU4 83 aa13.78□□□□□ -0.2
NOTCH3-201ENST00000263388 ELANEP08246 267 aa13.78□□□□□ -0.2
NOTCH3-201ENST00000263388 ZMAT4Q9H898 229 aa13.78□□□□□ -0.2
NOTCH3-201ENST00000263388 A0A0B4J2C4 111 aa13.78□□□□□ -0.2
NOTCH3-201ENST00000263388 HOXB4P17483 251 aaPredicted RBP13.77□□□□□ -0.2
NOTCH3-201ENST00000263388 NOTCH2Q04721 2471 aa13.77□□□□□ -0.21
NOTCH3-201ENST00000263388 CFC1BP0CG36 223 aa13.77□□□□□ -0.21
NOTCH3-201ENST00000263388 CFC1P0CG37 223 aa13.77□□□□□ -0.21
NOTCH3-201ENST00000263388 ZNF491Q8N8L2 437 aa13.77□□□□□ -0.21
NOTCH3-201ENST00000263388 LRRK2Q5S007 2527 aa13.77□□□□□ -0.21
NOTCH3-201ENST00000263388 H0YGX0 51 aa13.77□□□□□ -0.21
NOTCH3-201ENST00000263388 PROP1O75360 226 aa13.77□□□□□ -0.21
NOTCH3-201ENST00000263388 PSMB8P28062 276 aa13.77□□□□□ -0.21
NOTCH3-201ENST00000263388 SP5Q6BEB4 398 aaPredicted RBP13.77□□□□□ -0.21
NOTCH3-201ENST00000263388 DAZ2Q13117 558 aaKnown RBP13.76□□□□□ -0.21
NOTCH3-201ENST00000263388 DAZ4Q86SG3 579 aaKnown RBP13.76□□□□□ -0.21
NOTCH3-201ENST00000263388 DAZ3Q9NR90 486 aaKnown RBP13.76□□□□□ -0.21
NOTCH3-201ENST00000263388 XCL1P47992 114 aa13.76□□□□□ -0.21
NOTCH3-201ENST00000263388 VSIG2Q96IQ7 327 aa13.76□□□□□ -0.21
NOTCH3-201ENST00000263388 DYNAPQ8N1N2 210 aa13.76□□□□□ -0.21
NOTCH3-201ENST00000263388 IGLC7A0M8Q6 106 aa13.76□□□□□ -0.21
NOTCH3-201ENST00000263388 CLPSL2Q6UWE3 100 aa13.76□□□□□ -0.21
NOTCH3-201ENST00000263388 PRR30Q53SZ7 412 aaPredicted RBP13.76□□□□□ -0.21
NOTCH3-201ENST00000263388 NOP10Q9NPE3 64 aaKnown RBP13.75□□□□□ -0.21
NOTCH3-201ENST00000263388 ZNF747Q9BV97 191 aa13.75□□□□□ -0.21
NOTCH3-201ENST00000263388 DUX4L9Q6RFH8 374 aaPredicted RBP13.75□□□□□ -0.21
NOTCH3-201ENST00000263388 FAM236AA0A1B0GUQ0 79 aa13.75□□□□□ -0.21
NOTCH3-201ENST00000263388 FAM236BA0A1B0GV22 79 aa13.75□□□□□ -0.21
NOTCH3-201ENST00000263388 ETDCA0A1B0GVM5 59 aa13.74□□□□□ -0.21
NOTCH3-201ENST00000263388 RNASE13Q5GAN3 156 aaKnown RBP13.74□□□□□ -0.21
NOTCH3-201ENST00000263388 VPREB3Q9UKI3 123 aa13.74□□□□□ -0.21
NOTCH3-201ENST00000263388 Q9H8V8 135 aa13.74□□□□□ -0.21
NOTCH3-201ENST00000263388 PRR20EP86478 221 aa13.74□□□□□ -0.21
NOTCH3-201ENST00000263388 PRR20CP86479 221 aa13.74□□□□□ -0.21
NOTCH3-201ENST00000263388 PRR20DP86480 221 aa13.74□□□□□ -0.21
NOTCH3-201ENST00000263388 PRR20BP86481 221 aa13.74□□□□□ -0.21
NOTCH3-201ENST00000263388 PRR20AP86496 221 aa13.74□□□□□ -0.21
NOTCH3-201ENST00000263388 NTN5Q8WTR8 489 aaPredicted RBP13.74□□□□□ -0.21
NOTCH3-201ENST00000263388 HIVEP3Q5T1R4 2406 aa13.74□□□□□ -0.21
NOTCH3-201ENST00000263388 MUSTN1Q8IVN3 82 aa13.74□□□□□ -0.21
NOTCH3-201ENST00000263388 ICOSQ9Y6W8 199 aa13.73□□□□□ -0.21
NOTCH3-201ENST00000263388 ATP5G1P05496 136 aa13.73□□□□□ -0.21
NOTCH3-201ENST00000263388 IL15RAQ13261 267 aa13.73□□□□□ -0.21
NOTCH3-201ENST00000263388 PIEZO2Q9H5I5 2752 aa13.73□□□□□ -0.21
NOTCH3-201ENST00000263388 RPL18AQ02543 176 aaKnown RBP13.73□□□□□ -0.21
NOTCH3-201ENST00000263388 Q8NFD4 153 aa13.73□□□□□ -0.21
NOTCH3-201ENST00000263388 FOXE3Q13461 319 aa13.73□□□□□ -0.21
NOTCH3-201ENST00000263388 MAPK1IP1LQ8NDC0 245 aa13.73□□□□□ -0.21
NOTCH3-201ENST00000263388 KIR2DL5BA0A0G2JN68 375 aa13.72□□□□□ -0.21
NOTCH3-201ENST00000263388 KIR2DL5BA0A0G2JPC4 375 aa13.72□□□□□ -0.21
NOTCH3-201ENST00000263388 RSPO1Q2MKA7 263 aaPredicted RBP13.72□□□□□ -0.21
NOTCH3-201ENST00000263388 KIR2DL5AQ8N109 375 aa13.72□□□□□ -0.21
NOTCH3-201ENST00000263388 SH2D6Q7Z4S9 175 aa13.72□□□□□ -0.21
NOTCH3-201ENST00000263388 BUB3O43684 328 aa13.72□□□□□ -0.21
NOTCH3-201ENST00000263388 AMTNQ6UX39 209 aa13.72□□□□□ -0.21
NOTCH3-201ENST00000263388 ZNF503-AS2A6NEH8 195 aa13.72□□□□□ -0.21
NOTCH3-201ENST00000263388 CCL24O00175 119 aa13.72□□□□□ -0.21
NOTCH3-201ENST00000263388 NREPQ16612 68 aa13.72□□□□□ -0.21
NOTCH3-201ENST00000263388 FAM120AOSQ5T036 256 aa13.72□□□□□ -0.21
NOTCH3-201ENST00000263388 ZFP2Q6ZN57 461 aa13.71□□□□□ -0.21
NOTCH3-201ENST00000263388 OPRPNQ99935 248 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 558.3 ms