RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 LINC00527Q9UJ94 153 aa14.55□□□□□ -0.08
COL4A3BP-201ENST00000261415 NHLRC4P0CG21 123 aaPredicted RBP14.54□□□□□ -0.08
COL4A3BP-201ENST00000261415 FAM106AQ4KMX7 169 aa14.54□□□□□ -0.08
COL4A3BP-201ENST00000261415 C19orf54Q5BKX5 351 aa14.54□□□□□ -0.08
COL4A3BP-201ENST00000261415 DLX4Q92988 240 aaPredicted RBP14.54□□□□□ -0.08
COL4A3BP-201ENST00000261415 ZMAT4Q9H898 229 aa14.54□□□□□ -0.08
COL4A3BP-201ENST00000261415 NF1P21359 2839 aa14.54□□□□□ -0.08
COL4A3BP-201ENST00000261415 TRAV41A0A0B4J266 112 aa14.54□□□□□ -0.08
COL4A3BP-201ENST00000261415 PGPA6NDG6 321 aa14.54□□□□□ -0.08
COL4A3BP-201ENST00000261415 FABP5P3A8MUU1 101 aa14.54□□□□□ -0.08
COL4A3BP-201ENST00000261415 INAFM1C9JVW0 142 aa14.54□□□□□ -0.08
COL4A3BP-201ENST00000261415 FANCD2OSQ96PS1 177 aa14.54□□□□□ -0.08
COL4A3BP-201ENST00000261415 ESM1Q9NQ30 184 aa14.54□□□□□ -0.08
COL4A3BP-201ENST00000261415 IGLV11-55A0A075B6I3 123 aa14.53□□□□□ -0.08
COL4A3BP-201ENST00000261415 EVI2AP22794 236 aa14.53□□□□□ -0.08
COL4A3BP-201ENST00000261415 LINC01559Q495D7 138 aa14.53□□□□□ -0.08
COL4A3BP-201ENST00000261415 DKK2Q9UBU2 259 aa14.53□□□□□ -0.08
COL4A3BP-201ENST00000261415 IGKV2D-26A0A0A0MRZ7 120 aa14.53□□□□□ -0.08
COL4A3BP-201ENST00000261415 RHODO00212 210 aa14.53□□□□□ -0.08
COL4A3BP-201ENST00000261415 IGHV3-48P01763 117 aa14.53□□□□□ -0.08
COL4A3BP-201ENST00000261415 ODF1Q14990 250 aa14.53□□□□□ -0.08
COL4A3BP-201ENST00000261415 HHLA3Q9XRX5 114 aa14.53□□□□□ -0.08
COL4A3BP-201ENST00000261415 U3KQK5 164 aa14.53□□□□□ -0.08
COL4A3BP-201ENST00000261415 PPIFP30405 207 aaKnown RBP14.52□□□□□ -0.08
COL4A3BP-201ENST00000261415 ZNF493Q6ZR52 646 aa14.52□□□□□ -0.08
COL4A3BP-201ENST00000261415 SGK494Q96LW2 274 aa14.52□□□□□ -0.08
COL4A3BP-201ENST00000261415 CITED1Q99966 193 aa14.52□□□□□ -0.08
COL4A3BP-201ENST00000261415 I3L2K1 104 aa14.52□□□□□ -0.09
COL4A3BP-201ENST00000261415 GLMPQ8WWB7 406 aa14.52□□□□□ -0.09
COL4A3BP-201ENST00000261415 MRPL36Q9P0J6 103 aaKnown RBP14.52□□□□□ -0.09
COL4A3BP-201ENST00000261415 FN1P02751 2386 aaKnown RBP14.51□□□□□ -0.09
COL4A3BP-201ENST00000261415 IGHV3-21A0A0B4J1V1 117 aa14.51□□□□□ -0.09
COL4A3BP-201ENST00000261415 LOC389332A0A1B0GUA5 103 aa14.51□□□□□ -0.09
COL4A3BP-201ENST00000261415 IGHG4P01861 327 aa14.51□□□□□ -0.09
COL4A3BP-201ENST00000261415 TEN1Q86WV5 123 aa14.51□□□□□ -0.09
COL4A3BP-201ENST00000261415 ZNF702PQ9H963 129 aa14.51□□□□□ -0.09
COL4A3BP-201ENST00000261415 K7EIM0 57 aa14.5□□□□□ -0.09
COL4A3BP-201ENST00000261415 ARMS2P0C7Q2 107 aa14.5□□□□□ -0.09
COL4A3BP-201ENST00000261415 ZNF688P0C7X2 276 aa14.5□□□□□ -0.09
COL4A3BP-201ENST00000261415 SMCPP49901 116 aaPredicted RBP14.5□□□□□ -0.09
COL4A3BP-201ENST00000261415 NDUFV3P56181 108 aaKnown RBP14.5□□□□□ -0.09
COL4A3BP-201ENST00000261415 ZNF580Q9UK33 172 aa14.5□□□□□ -0.09
COL4A3BP-201ENST00000261415 ORMDL3Q8N138 153 aa14.5□□□□□ -0.09
COL4A3BP-201ENST00000261415 TMEM158Q8WZ71 300 aa14.5□□□□□ -0.09
COL4A3BP-201ENST00000261415 A0A087WX48 190 aa14.49□□□□□ -0.09
COL4A3BP-201ENST00000261415 WI2-2373I1.2A0A1W2PRP0 233 aa14.49□□□□□ -0.09
COL4A3BP-201ENST00000261415 IGKCP01834 107 aa14.49□□□□□ -0.09
COL4A3BP-201ENST00000261415 KLK9Q2XQG4 91 aa14.49□□□□□ -0.09
COL4A3BP-201ENST00000261415 MAP1LC3AQ9H492 121 aa14.49□□□□□ -0.09
COL4A3BP-201ENST00000261415 KLK9Q9UKQ9 250 aa14.49□□□□□ -0.09
COL4A3BP-201ENST00000261415 GAGE2BQ13066 116 aa14.49□□□□□ -0.09
COL4A3BP-201ENST00000261415 GAGE2EQ4V326 116 aa14.49□□□□□ -0.09
COL4A3BP-201ENST00000261415 NPIPB3Q92617 1050 aa14.49□□□□□ -0.09
COL4A3BP-201ENST00000261415 HIST1H4GQ99525 98 aa14.49□□□□□ -0.09
COL4A3BP-201ENST00000261415 GAGE2DQ9UEU5 116 aa14.49□□□□□ -0.09
COL4A3BP-201ENST00000261415 D6R8Y8 96 aa14.48□□□□□ -0.09
COL4A3BP-201ENST00000261415 LINC01619G3V211 115 aa14.48□□□□□ -0.09
COL4A3BP-201ENST00000261415 TCRAP04437 139 aa14.48□□□□□ -0.09
COL4A3BP-201ENST00000261415 HILS1P60008 231 aa14.48□□□□□ -0.09
COL4A3BP-201ENST00000261415 IL4P05112 153 aa14.48□□□□□ -0.09
COL4A3BP-201ENST00000261415 TTC32Q5I0X7 151 aa14.48□□□□□ -0.09
COL4A3BP-201ENST00000261415 LYRM7Q5U5X0 104 aa14.48□□□□□ -0.09
COL4A3BP-201ENST00000261415 SPXQ9BT56 116 aa14.47□□□□□ -0.09
COL4A3BP-201ENST00000261415 TTTY13Q9BZ97 58 aa14.47□□□□□ -0.09
COL4A3BP-201ENST00000261415 IFITM1P13164 125 aa14.46□□□□□ -0.09
COL4A3BP-201ENST00000261415 CFHR3Q02985 330 aa14.46□□□□□ -0.09
COL4A3BP-201ENST00000261415 PATE2Q6UY27 113 aa14.46□□□□□ -0.09
COL4A3BP-201ENST00000261415 Q8N2B8 174 aa14.46□□□□□ -0.09
COL4A3BP-201ENST00000261415 S4R3C0 116 aa14.46□□□□□ -0.09
COL4A3BP-201ENST00000261415 RNASE1P07998 156 aaKnown RBP14.46□□□□□ -0.09
COL4A3BP-201ENST00000261415 Q6Q795 121 aa14.46□□□□□ -0.09
COL4A3BP-201ENST00000261415 THAP8Q8NA92 274 aa14.46□□□□□ -0.09
COL4A3BP-201ENST00000261415 CARD19Q96LW7 228 aa14.46□□□□□ -0.09
COL4A3BP-201ENST00000261415 DPM2O94777 84 aa14.45□□□□□ -0.1
COL4A3BP-201ENST00000261415 ASIPP42127 132 aa14.45□□□□□ -0.1
COL4A3BP-201ENST00000261415 TWIST1Q15672 202 aa14.45□□□□□ -0.1
COL4A3BP-201ENST00000261415 LINC00305Q7Z4B0 112 aa14.45□□□□□ -0.1
COL4A3BP-201ENST00000261415 IGKV1D-37A0A075B6S9 117 aa14.45□□□□□ -0.1
COL4A3BP-201ENST00000261415 CCDC179H3BU77 68 aa14.45□□□□□ -0.1
COL4A3BP-201ENST00000261415 C15orf32Q32M92 178 aa14.45□□□□□ -0.1
COL4A3BP-201ENST00000261415 FAM104BQ5XKR9 115 aa14.45□□□□□ -0.1
COL4A3BP-201ENST00000261415 Q86TA4 180 aa14.45□□□□□ -0.1
COL4A3BP-201ENST00000261415 TRBV6-1A0A0K0K1D8 114 aa14.44□□□□□ -0.1
COL4A3BP-201ENST00000261415 H3BUA1 57 aa14.44□□□□□ -0.1
COL4A3BP-201ENST00000261415 ATP5LO75964 103 aa14.44□□□□□ -0.1
COL4A3BP-201ENST00000261415 IGLV1-40P01703 118 aa14.44□□□□□ -0.1
COL4A3BP-201ENST00000261415 K7EMI3 77 aa14.44□□□□□ -0.1
COL4A3BP-201ENST00000261415 CRLF1O75462 422 aa14.44□□□□□ -0.1
COL4A3BP-201ENST00000261415 SNCGO76070 127 aa14.44□□□□□ -0.1
COL4A3BP-201ENST00000261415 ZC2HC1BQ5TFG8 222 aa14.44□□□□□ -0.1
COL4A3BP-201ENST00000261415 TMEM190Q8WZ59 177 aa14.44□□□□□ -0.1
COL4A3BP-201ENST00000261415 C21orf62Q9NYP8 219 aa14.44□□□□□ -0.1
COL4A3BP-201ENST00000261415 TRGV3P03979 118 aa14.43□□□□□ -0.1
COL4A3BP-201ENST00000261415 MORN3Q6PF18 240 aaPredicted RBP14.43□□□□□ -0.1
COL4A3BP-201ENST00000261415 Q6ZSV7 163 aa14.43□□□□□ -0.1
COL4A3BP-201ENST00000261415 GTSCR1Q86UQ5 136 aa14.43□□□□□ -0.1
COL4A3BP-201ENST00000261415 IGHV3-23P01764 117 aa14.43□□□□□ -0.1
COL4A3BP-201ENST00000261415 PRSS1P07477 247 aa14.43□□□□□ -0.1
COL4A3BP-201ENST00000261415 MFAP4P55083 255 aa14.43□□□□□ -0.1
COL4A3BP-201ENST00000261415 TRBV7-3A0A075B6L6 115 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 530.3 ms