RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 IGLV2-14P01704 120 aa7.65□□□□□ -1.18
CTDSPL2-201ENST00000260327 CGB3P0DN86 165 aa7.65□□□□□ -1.18
CTDSPL2-201ENST00000260327 KIAA1549LQ6ZVL6 1849 aa7.65□□□□□ -1.18
CTDSPL2-201ENST00000260327 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.65□□□□□ -1.18
CTDSPL2-201ENST00000260327 IGKV2-29A2NJV5 120 aaPredicted RBP7.65□□□□□ -1.18
CTDSPL2-201ENST00000260327 ACYP1P07311 99 aa7.65□□□□□ -1.18
CTDSPL2-201ENST00000260327 TNRC6AQ8NDV7 1962 aaKnown RBP7.65□□□□□ -1.18
CTDSPL2-201ENST00000260327 A0A0B4J2C4 111 aa7.65□□□□□ -1.19
CTDSPL2-201ENST00000260327 HIGD1BQ9P298 99 aa7.65□□□□□ -1.19
CTDSPL2-201ENST00000260327 PATE2Q6UY27 113 aa7.64□□□□□ -1.19
CTDSPL2-201ENST00000260327 FAM110DQ8TAY7 271 aaPredicted RBP7.64□□□□□ -1.19
CTDSPL2-201ENST00000260327 ATOX1O00244 68 aa7.64□□□□□ -1.19
CTDSPL2-201ENST00000260327 USMG5Q96IX5 58 aa7.64□□□□□ -1.19
CTDSPL2-201ENST00000260327 CLPSL1A2RUU4 121 aa7.64□□□□□ -1.19
CTDSPL2-201ENST00000260327 LOXL1Q08397 574 aaPredicted RBP7.64□□□□□ -1.19
CTDSPL2-201ENST00000260327 POU2AF1Q16633 256 aa7.64□□□□□ -1.19
CTDSPL2-201ENST00000260327 KRTAP27-1Q3LI81 207 aa7.64□□□□□ -1.19
CTDSPL2-201ENST00000260327 Q6ZSR3 168 aa7.64□□□□□ -1.19
CTDSPL2-201ENST00000260327 AGPAT4-IT1Q9H0P7 198 aa7.64□□□□□ -1.19
CTDSPL2-201ENST00000260327 PLCE1Q9P212 2302 aa7.64□□□□□ -1.19
CTDSPL2-201ENST00000260327 EP400Q96L91 3159 aa7.64□□□□□ -1.19
CTDSPL2-201ENST00000260327 RITA1Q96K30 269 aa7.64□□□□□ -1.19
CTDSPL2-201ENST00000260327 C22orf46C9J442 243 aa7.63□□□□□ -1.19
CTDSPL2-201ENST00000260327 SPANXCQ9NY87 97 aa7.63□□□□□ -1.19
CTDSPL2-201ENST00000260327 GP9P14770 177 aa7.63□□□□□ -1.19
CTDSPL2-201ENST00000260327 CLPSL2Q6UWE3 100 aa7.63□□□□□ -1.19
CTDSPL2-201ENST00000260327 CLUHP3Q96NS8 147 aa7.63□□□□□ -1.19
CTDSPL2-201ENST00000260327 C11orf1Q9H5F2 150 aa7.63□□□□□ -1.19
CTDSPL2-201ENST00000260327 LINC00311Q8N616 119 aa7.63□□□□□ -1.19
CTDSPL2-201ENST00000260327 PCDH15Q96QU1 1955 aa7.63□□□□□ -1.19
CTDSPL2-201ENST00000260327 PCNX2A6NKB5 2137 aa7.63□□□□□ -1.19
CTDSPL2-201ENST00000260327 NBL1P41271 181 aa7.63□□□□□ -1.19
CTDSPL2-201ENST00000260327 NDUFV3P56181 108 aaKnown RBP7.63□□□□□ -1.19
CTDSPL2-201ENST00000260327 ZNF106Q9H2Y7 1883 aaKnown RBP7.63□□□□□ -1.19
CTDSPL2-201ENST00000260327 A0A0J9YXV3 536 aa7.63□□□□□ -1.19
CTDSPL2-201ENST00000260327 DAD1P61803 113 aa7.63□□□□□ -1.19
CTDSPL2-201ENST00000260327 BRK1Q8WUW1 75 aa7.63□□□□□ -1.19
CTDSPL2-201ENST00000260327 RHODO00212 210 aa7.62□□□□□ -1.19
CTDSPL2-201ENST00000260327 RPL39P62891 51 aaKnown RBP7.62□□□□□ -1.19
CTDSPL2-201ENST00000260327 NACAE9PAV3 2078 aa7.62□□□□□ -1.19
CTDSPL2-201ENST00000260327 TCL1BO95988 128 aa7.62□□□□□ -1.19
CTDSPL2-201ENST00000260327 RNF138Q8WVD3 245 aa7.62□□□□□ -1.19
CTDSPL2-201ENST00000260327 ORMDL1Q9P0S3 153 aa7.62□□□□□ -1.19
CTDSPL2-201ENST00000260327 hADV29S1A0JD25 119 aa7.62□□□□□ -1.19
CTDSPL2-201ENST00000260327 IGHG2P01859 326 aa7.62□□□□□ -1.19
CTDSPL2-201ENST00000260327 HERVK_113P63121 156 aa7.62□□□□□ -1.19
CTDSPL2-201ENST00000260327 ODF1Q14990 250 aa7.62□□□□□ -1.19
CTDSPL2-201ENST00000260327 SPANXB1Q9NS25 103 aaPredicted RBP7.62□□□□□ -1.19
CTDSPL2-201ENST00000260327 ODF3L1Q8IXM7 274 aa7.62□□□□□ -1.19
CTDSPL2-201ENST00000260327 NCKAP5O14513 1909 aa7.61□□□□□ -1.19
CTDSPL2-201ENST00000260327 ATP6V0E2Q8NHE4 81 aa7.61□□□□□ -1.19
CTDSPL2-201ENST00000260327 FAM167A-AS1Q96KT0 104 aa7.61□□□□□ -1.19
CTDSPL2-201ENST00000260327 IGKV1OR2-108A0A075B7D4 117 aa7.61□□□□□ -1.19
CTDSPL2-201ENST00000260327 NDUFC2O95298 119 aa7.61□□□□□ -1.19
CTDSPL2-201ENST00000260327 CRYGBP07316 175 aa7.61□□□□□ -1.19
CTDSPL2-201ENST00000260327 TRBV10-2A0A0K0K1G8 114 aa7.61□□□□□ -1.19
CTDSPL2-201ENST00000260327 ZFP2Q6ZN57 461 aa7.61□□□□□ -1.19
CTDSPL2-201ENST00000260327 Q6ZPA2 131 aa7.61□□□□□ -1.19
CTDSPL2-201ENST00000260327 GDF5OSQ5U4N7 250 aa7.61□□□□□ -1.19
CTDSPL2-201ENST00000260327 BAALCQ8WXS3 180 aa7.61□□□□□ -1.19
CTDSPL2-201ENST00000260327 CTSZQ9UBR2 303 aa7.61□□□□□ -1.19
CTDSPL2-201ENST00000260327 FAM215AQ9Y5M1 114 aa7.61□□□□□ -1.19
CTDSPL2-201ENST00000260327 YPEL4Q96NS1 127 aa7.6□□□□□ -1.19
CTDSPL2-201ENST00000260327 A0A096LPF7 62 aa7.6□□□□□ -1.19
CTDSPL2-201ENST00000260327 PSMB8P28062 276 aa7.6□□□□□ -1.19
CTDSPL2-201ENST00000260327 IGHV4-4A0A075B6R2 117 aa7.6□□□□□ -1.19
CTDSPL2-201ENST00000260327 LGALS9O00182 355 aa7.6□□□□□ -1.19
CTDSPL2-201ENST00000260327 TP53TG3Q9ULZ0 132 aa7.6□□□□□ -1.19
CTDSPL2-201ENST00000260327 PRR14LQ5THK1 2151 aa7.59□□□□□ -1.19
CTDSPL2-201ENST00000260327 E7EUB6 86 aa7.59□□□□□ -1.19
CTDSPL2-201ENST00000260327 UBE2E1P51965 193 aa7.59□□□□□ -1.19
CTDSPL2-201ENST00000260327 MED12LQ86YW9 2145 aa7.59□□□□□ -1.19
CTDSPL2-201ENST00000260327 CTRLP40313 264 aa7.59□□□□□ -1.19
CTDSPL2-201ENST00000260327 PRSS33Q8NF86 280 aa7.59□□□□□ -1.19
CTDSPL2-201ENST00000260327 E9PLD3 99 aa7.58□□□□□ -1.2
CTDSPL2-201ENST00000260327 C2orf16Q68DN1 1984 aa7.58□□□□□ -1.2
CTDSPL2-201ENST00000260327 TANC2Q9HCD6 1990 aa7.58□□□□□ -1.2
CTDSPL2-201ENST00000260327 C11orf86A6NJI1 115 aa7.58□□□□□ -1.2
CTDSPL2-201ENST00000260327 PLXNB1O43157 2135 aa7.58□□□□□ -1.2
CTDSPL2-201ENST00000260327 NDUFA11Q86Y39 141 aa7.58□□□□□ -1.2
CTDSPL2-201ENST00000260327 RNF114Q9Y508 228 aa7.58□□□□□ -1.2
CTDSPL2-201ENST00000260327 TEX49A0A1B0GTD5 131 aa7.58□□□□□ -1.2
CTDSPL2-201ENST00000260327 RHOHQ15669 191 aa7.58□□□□□ -1.2
CTDSPL2-201ENST00000260327 Q8N1Y9 231 aa7.58□□□□□ -1.2
CTDSPL2-201ENST00000260327 DEFB105AQ8NG35 78 aa7.58□□□□□ -1.2
CTDSPL2-201ENST00000260327 CRIP3Q6Q6R5 217 aa7.58□□□□□ -1.2
CTDSPL2-201ENST00000260327 TMEM131Q92545 1883 aa7.58□□□□□ -1.2
CTDSPL2-201ENST00000260327 GNLYP22749 145 aa7.58□□□□□ -1.2
CTDSPL2-201ENST00000260327 MRPL36Q9P0J6 103 aaKnown RBP7.58□□□□□ -1.2
CTDSPL2-201ENST00000260327 IGHV4-28A0A0C4DH34 117 aa7.57□□□□□ -1.2
CTDSPL2-201ENST00000260327 ZNF561-AS1K7EIQ3 104 aa7.57□□□□□ -1.2
CTDSPL2-201ENST00000260327 XCL1P47992 114 aa7.57□□□□□ -1.2
CTDSPL2-201ENST00000260327 TNCP24821 2201 aa7.57□□□□□ -1.2
CTDSPL2-201ENST00000260327 ZNF295-AS1Q8N0V1 137 aa7.57□□□□□ -1.2
CTDSPL2-201ENST00000260327 ADAMTS9Q9P2N4 1935 aa7.57□□□□□ -1.2
CTDSPL2-201ENST00000260327 PRAC2D3DTV9 90 aa7.57□□□□□ -1.2
CTDSPL2-201ENST00000260327 MAPK1IP1LQ8NDC0 245 aa7.57□□□□□ -1.2
CTDSPL2-201ENST00000260327 IGHV1-69DA0A0B4J2H0 117 aa7.57□□□□□ -1.2
CTDSPL2-201ENST00000260327 A0A0U1RQV1 116 aa7.57□□□□□ -1.2
CTDSPL2-201ENST00000260327 B4DSR2 109 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms