RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 BEX4Q9NWD9 120 aaPredicted RBP13.02□□□□□ -0.33
LRFN3-201ENST00000246529 TMEM97Q5BJF2 176 aa13.01□□□□□ -0.33
LRFN3-201ENST00000246529 PSMG4Q5JS54 123 aa13.01□□□□□ -0.33
LRFN3-201ENST00000246529 SMIM2Q9BVW6 85 aa13.01□□□□□ -0.33
LRFN3-201ENST00000246529 DPH3P1Q9H4G8 78 aa13.01□□□□□ -0.33
LRFN3-201ENST00000246529 ZMAT4Q9H898 229 aa13.01□□□□□ -0.33
LRFN3-201ENST00000246529 TRAV12-3A0A0B4J271 114 aa13.01□□□□□ -0.33
LRFN3-201ENST00000246529 ID1P41134 155 aa13.01□□□□□ -0.33
LRFN3-201ENST00000246529 ZNF580Q9UK33 172 aa13.01□□□□□ -0.33
LRFN3-201ENST00000246529 KLLNB2CW77 178 aa13□□□□□ -0.33
LRFN3-201ENST00000246529 J3QLI3 93 aa13□□□□□ -0.33
LRFN3-201ENST00000246529 IGHV4-31P0DP07 118 aa13□□□□□ -0.33
LRFN3-201ENST00000246529 UBE2V1Q13404 147 aa13□□□□□ -0.33
LRFN3-201ENST00000246529 VAMP3Q15836 100 aa13□□□□□ -0.33
LRFN3-201ENST00000246529 GTSCR1Q86UQ5 136 aa13□□□□□ -0.33
LRFN3-201ENST00000246529 JPT2Q9H910 190 aa13□□□□□ -0.33
LRFN3-201ENST00000246529 IGKCP01834 107 aa13□□□□□ -0.33
LRFN3-201ENST00000246529 ZNF843Q8N446 348 aa13□□□□□ -0.33
LRFN3-201ENST00000246529 MYOZ3Q8TDC0 251 aa13□□□□□ -0.33
LRFN3-201ENST00000246529 DEFB104AQ8WTQ1 72 aa13□□□□□ -0.33
LRFN3-201ENST00000246529 VPREB3Q9UKI3 123 aa13□□□□□ -0.33
LRFN3-201ENST00000246529 TRAV12-2A0A075B6T6 113 aa12.99□□□□□ -0.33
LRFN3-201ENST00000246529 IGHV4OR15-8A0A075B7B6 117 aa12.99□□□□□ -0.33
LRFN3-201ENST00000246529 A0A087WW49 117 aa12.99□□□□□ -0.33
LRFN3-201ENST00000246529 HOXA3O43365 443 aaPredicted RBP12.99□□□□□ -0.33
LRFN3-201ENST00000246529 SUMO2P61956 95 aaKnown RBP12.99□□□□□ -0.33
LRFN3-201ENST00000246529 TMEM160Q9NX00 188 aa12.99□□□□□ -0.33
LRFN3-201ENST00000246529 MRPL35Q9NZE8 188 aaKnown RBP12.99□□□□□ -0.33
LRFN3-201ENST00000246529 NAV2Q8IVL1 2488 aa12.99□□□□□ -0.33
LRFN3-201ENST00000246529 FAM159AQ6UWV7 190 aa12.98□□□□□ -0.33
LRFN3-201ENST00000246529 NEGR1Q7Z3B1 354 aa12.98□□□□□ -0.33
LRFN3-201ENST00000246529 ZNF702PQ9H963 129 aa12.98□□□□□ -0.33
LRFN3-201ENST00000246529 TEX15Q9BXT5 2789 aa12.98□□□□□ -0.33
LRFN3-201ENST00000246529 TRBV7-9A0A0J9YWB2 115 aa12.98□□□□□ -0.33
LRFN3-201ENST00000246529 ATP5LO75964 103 aa12.98□□□□□ -0.33
LRFN3-201ENST00000246529 DPM2O94777 84 aa12.97□□□□□ -0.33
LRFN3-201ENST00000246529 MED14OSP0DP75 135 aa12.97□□□□□ -0.33
LRFN3-201ENST00000246529 ZC2HC1BQ5TFG8 222 aa12.97□□□□□ -0.33
LRFN3-201ENST00000246529 Q6YL49 198 aa12.97□□□□□ -0.33
LRFN3-201ENST00000246529 AP1S3Q96PC3 154 aa12.97□□□□□ -0.33
LRFN3-201ENST00000246529 CD7P09564 240 aa12.97□□□□□ -0.33
LRFN3-201ENST00000246529 ADAMTSL5Q6ZMM2 481 aa12.97□□□□□ -0.33
LRFN3-201ENST00000246529 C18orf65Q6ZTR6 163 aa12.97□□□□□ -0.33
LRFN3-201ENST00000246529 MUC4Q99102 2169 aa12.97□□□□□ -0.33
LRFN3-201ENST00000246529 FSHBP01225 129 aa12.96□□□□□ -0.33
LRFN3-201ENST00000246529 A0A087WWL8 130 aa12.96□□□□□ -0.34
LRFN3-201ENST00000246529 LGALS1P09382 135 aaKnown RBP12.96□□□□□ -0.34
LRFN3-201ENST00000246529 OR9G4Q8NGQ1 327 aa12.96□□□□□ -0.34
LRFN3-201ENST00000246529 HOXD3P31249 432 aaPredicted RBP12.95□□□□□ -0.34
LRFN3-201ENST00000246529 DEFB136Q30KP8 78 aa12.95□□□□□ -0.34
LRFN3-201ENST00000246529 HIST2H2BDQ6DRA6 164 aa12.95□□□□□ -0.34
LRFN3-201ENST00000246529 TMEM89A2RUT3 159 aa12.95□□□□□ -0.34
LRFN3-201ENST00000246529 LINC00315P59091 139 aa12.95□□□□□ -0.34
LRFN3-201ENST00000246529 Q5PR19 223 aa12.95□□□□□ -0.34
LRFN3-201ENST00000246529 AMMECR1LQ6DCA0 310 aa12.95□□□□□ -0.34
LRFN3-201ENST00000246529 ZNF469Q96JG9 3925 aaPredicted RBP12.94□□□□□ -0.34
LRFN3-201ENST00000246529 TRAV8-6A0A0B4J262 113 aa12.94□□□□□ -0.34
LRFN3-201ENST00000246529 A0A0J9YX75 114 aa12.94□□□□□ -0.34
LRFN3-201ENST00000246529 K7EQG2 157 aa12.94□□□□□ -0.34
LRFN3-201ENST00000246529 C20orf78Q9BR46 151 aa12.94□□□□□ -0.34
LRFN3-201ENST00000246529 KIF25-AS1Q9Y6Z4 181 aa12.94□□□□□ -0.34
LRFN3-201ENST00000246529 EPG5Q9HCE0 2579 aa12.94□□□□□ -0.34
LRFN3-201ENST00000246529 A0A087WX48 190 aa12.94□□□□□ -0.34
LRFN3-201ENST00000246529 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.94□□□□□ -0.34
LRFN3-201ENST00000246529 NXPH4O95158 308 aa12.94□□□□□ -0.34
LRFN3-201ENST00000246529 SNRPD3P62318 126 aaKnown RBP12.94□□□□□ -0.34
LRFN3-201ENST00000246529 SPINK13Q1W4C9 94 aa12.94□□□□□ -0.34
LRFN3-201ENST00000246529 CSTL1Q9H114 145 aa12.94□□□□□ -0.34
LRFN3-201ENST00000246529 HSD52Q0P140 79 aa12.93□□□□□ -0.34
LRFN3-201ENST00000246529 SCGB3A1Q96QR1 104 aa12.93□□□□□ -0.34
LRFN3-201ENST00000246529 MDFICQ9P1T7 246 aa12.93□□□□□ -0.34
LRFN3-201ENST00000246529 SEC11AP67812 179 aa12.93□□□□□ -0.34
LRFN3-201ENST00000246529 ORMDL2Q53FV1 153 aa12.93□□□□□ -0.34
LRFN3-201ENST00000246529 NAA38Q9BRA0 125 aaKnown RBP12.93□□□□□ -0.34
LRFN3-201ENST00000246529 K7EP13 123 aa12.92□□□□□ -0.34
LRFN3-201ENST00000246529 SIVA1O15304 175 aa12.92□□□□□ -0.34
LRFN3-201ENST00000246529 DEFB113Q30KQ7 82 aa12.92□□□□□ -0.34
LRFN3-201ENST00000246529 TOMM6Q96B49 74 aa12.92□□□□□ -0.34
LRFN3-201ENST00000246529 CR1P17927 2039 aa12.92□□□□□ -0.34
LRFN3-201ENST00000246529 ELANEP08246 267 aa12.92□□□□□ -0.34
LRFN3-201ENST00000246529 SLURP1P55000 103 aa12.92□□□□□ -0.34
LRFN3-201ENST00000246529 SAMD13Q5VXD3 122 aa12.92□□□□□ -0.34
LRFN3-201ENST00000246529 OR4C5Q8NGB2 326 aa12.92□□□□□ -0.34
LRFN3-201ENST00000246529 Q96MF0 132 aa12.92□□□□□ -0.34
LRFN3-201ENST00000246529 AGRNO00468 2067 aa12.92□□□□□ -0.34
LRFN3-201ENST00000246529 CREBBPQ92793 2442 aa12.92□□□□□ -0.34
LRFN3-201ENST00000246529 SUMO4Q6EEV6 95 aa12.91□□□□□ -0.34
LRFN3-201ENST00000246529 C2orf66Q6UXQ4 117 aa12.91□□□□□ -0.34
LRFN3-201ENST00000246529 DUX3Q96PT4 197 aa12.91□□□□□ -0.34
LRFN3-201ENST00000246529 SORL1Q92673 2214 aa12.91□□□□□ -0.34
LRFN3-201ENST00000246529 MAPKAPK5-AS1Q8N8E1 139 aa12.91□□□□□ -0.34
LRFN3-201ENST00000246529 UBE2E2Q96LR5 201 aa12.91□□□□□ -0.34
LRFN3-201ENST00000246529 F5H697 171 aa12.9□□□□□ -0.34
LRFN3-201ENST00000246529 FAM74A4Q5TZK3 123 aa12.9□□□□□ -0.34
LRFN3-201ENST00000246529 APCP25054 2843 aa12.9□□□□□ -0.34
LRFN3-201ENST00000246529 IGHV3-16A0A0C4DH30 117 aa12.9□□□□□ -0.34
LRFN3-201ENST00000246529 Q8N1Y9 231 aa12.9□□□□□ -0.34
LRFN3-201ENST00000246529 RAB37Q96AX2 223 aa12.9□□□□□ -0.34
LRFN3-201ENST00000246529 RBX1P62877 108 aa12.89□□□□□ -0.35
LRFN3-201ENST00000246529 TCTEX1D4Q5JR98 221 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms