RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 TRPT1Q86TN4 253 aaKnown RBP12.13□□□□□ -0.47
DDX1-201ENST00000233084 DEFB104AQ8WTQ1 72 aa12.13□□□□□ -0.47
DDX1-201ENST00000233084 SPTAN1Q13813 2472 aaKnown RBP12.12□□□□□ -0.47
DDX1-201ENST00000233084 SLC25A20O43772 301 aa12.12□□□□□ -0.47
DDX1-201ENST00000233084 ADIPOQQ15848 244 aa12.12□□□□□ -0.47
DDX1-201ENST00000233084 IGFBPL1Q8WX77 278 aa12.12□□□□□ -0.47
DDX1-201ENST00000233084 LOXP28300 417 aaPredicted RBP12.12□□□□□ -0.47
DDX1-201ENST00000233084 IL17RELQ6ZVW7 336 aa12.12□□□□□ -0.47
DDX1-201ENST00000233084 DYNAPQ8N1N2 210 aa12.12□□□□□ -0.47
DDX1-201ENST00000233084 PRAC2D3DTV9 90 aa12.11□□□□□ -0.47
DDX1-201ENST00000233084 C19orf84I3L1E1 186 aa12.11□□□□□ -0.47
DDX1-201ENST00000233084 SPRY2O43597 315 aa12.11□□□□□ -0.47
DDX1-201ENST00000233084 NDUFB3O43676 98 aa12.11□□□□□ -0.47
DDX1-201ENST00000233084 E7EQL1 145 aa12.11□□□□□ -0.47
DDX1-201ENST00000233084 CD3EP07766 207 aa12.11□□□□□ -0.47
DDX1-201ENST00000233084 LINC00311Q8N616 119 aa12.11□□□□□ -0.47
DDX1-201ENST00000233084 WNK2Q9Y3S1 2297 aa12.11□□□□□ -0.47
DDX1-201ENST00000233084 IGKV3D-20A0A0C4DH25 116 aa12.1□□□□□ -0.47
DDX1-201ENST00000233084 CFC1BP0CG36 223 aa12.1□□□□□ -0.47
DDX1-201ENST00000233084 CFC1P0CG37 223 aa12.1□□□□□ -0.47
DDX1-201ENST00000233084 IGHV1-8P0DP01 117 aa12.1□□□□□ -0.47
DDX1-201ENST00000233084 RNF182Q8N6D2 247 aa12.1□□□□□ -0.47
DDX1-201ENST00000233084 C11orf21Q9P2W6 132 aa12.1□□□□□ -0.47
DDX1-201ENST00000233084 LRRK2Q5S007 2527 aa12.1□□□□□ -0.47
DDX1-201ENST00000233084 TRAV12-1A0A0B4J245 112 aa12.1□□□□□ -0.47
DDX1-201ENST00000233084 IGHG4P01861 327 aa12.1□□□□□ -0.47
DDX1-201ENST00000233084 CLEC3BP05452 202 aa12.1□□□□□ -0.47
DDX1-201ENST00000233084 Q6ZS46 218 aa12.1□□□□□ -0.47
DDX1-201ENST00000233084 COX8CQ7Z4L0 72 aa12.1□□□□□ -0.47
DDX1-201ENST00000233084 RASL10AQ92737 203 aa12.1□□□□□ -0.47
DDX1-201ENST00000233084 SPANXN1Q5VSR9 72 aa12.1□□□□□ -0.47
DDX1-201ENST00000233084 SBSPONQ8IVN8 264 aa12.1□□□□□ -0.47
DDX1-201ENST00000233084 NEXN-AS1Q8NBZ9 246 aa12.1□□□□□ -0.47
DDX1-201ENST00000233084 IGHV1-3A0A0C4DH29 117 aa12.09□□□□□ -0.47
DDX1-201ENST00000233084 NTN5Q8WTR8 489 aaPredicted RBP12.09□□□□□ -0.47
DDX1-201ENST00000233084 COX7A1P24310 79 aa12.09□□□□□ -0.47
DDX1-201ENST00000233084 PSMG3-AS1Q96PY0 264 aa12.09□□□□□ -0.47
DDX1-201ENST00000233084 BAALCQ8WXS3 180 aa12.08□□□□□ -0.48
DDX1-201ENST00000233084 HIF1ANQ9NWT6 349 aa12.08□□□□□ -0.48
DDX1-201ENST00000233084 SMAD5-AS1Q9Y6J3 95 aa12.08□□□□□ -0.48
DDX1-201ENST00000233084 RPL7P18124 248 aaKnown RBP12.08□□□□□ -0.48
DDX1-201ENST00000233084 SMIM2Q9BVW6 85 aa12.08□□□□□ -0.48
DDX1-201ENST00000233084 COX6B1P14854 86 aa12.07□□□□□ -0.48
DDX1-201ENST00000233084 TMEM155Q4W5P6 130 aa12.07□□□□□ -0.48
DDX1-201ENST00000233084 C10orf126Q8N4M7 172 aa12.07□□□□□ -0.48
DDX1-201ENST00000233084 MEIG1Q5JSS6 88 aa12.07□□□□□ -0.48
DDX1-201ENST00000233084 SVEP1Q4LDE5 3571 aa12.06□□□□□ -0.48
DDX1-201ENST00000233084 CRYBG3Q68DQ2 2970 aa12.06□□□□□ -0.48
DDX1-201ENST00000233084 A0A0J9YY99 117 aa12.06□□□□□ -0.48
DDX1-201ENST00000233084 ZNF672Q499Z4 452 aaPredicted RBP12.06□□□□□ -0.48
DDX1-201ENST00000233084 TMEM190Q8WZ59 177 aa12.06□□□□□ -0.48
DDX1-201ENST00000233084 TENM4Q6N022 2769 aa12.06□□□□□ -0.48
DDX1-201ENST00000233084 TEX49A0A1B0GTD5 131 aa12.06□□□□□ -0.48
DDX1-201ENST00000233084 C2orf66Q6UXQ4 117 aa12.06□□□□□ -0.48
DDX1-201ENST00000233084 Q8N1Y9 231 aa12.06□□□□□ -0.48
DDX1-201ENST00000233084 RPL39LQ96EH5 51 aaKnown RBP12.06□□□□□ -0.48
DDX1-201ENST00000233084 PRO1854Q9UHT4 67 aa12.06□□□□□ -0.48
DDX1-201ENST00000233084 IGHV3-66A0A0C4DH42 116 aa12.05□□□□□ -0.48
DDX1-201ENST00000233084 C15orf53Q8NAA6 179 aa12.05□□□□□ -0.48
DDX1-201ENST00000233084 J3KRW8 73 aa12.05□□□□□ -0.48
DDX1-201ENST00000233084 ARL3P36405 182 aa12.05□□□□□ -0.48
DDX1-201ENST00000233084 ASIPP42127 132 aa12.05□□□□□ -0.48
DDX1-201ENST00000233084 DLX6P56179 175 aa12.05□□□□□ -0.48
DDX1-201ENST00000233084 TOMM6Q96B49 74 aa12.05□□□□□ -0.48
DDX1-201ENST00000233084 IGHV3OR16-13A0A075B7E8 117 aa12.04□□□□□ -0.48
DDX1-201ENST00000233084 IGHV3-74A0A0B4J1X5 117 aa12.04□□□□□ -0.48
DDX1-201ENST00000233084 BEX4Q9NWD9 120 aaPredicted RBP12.04□□□□□ -0.48
DDX1-201ENST00000233084 A0A1W2PPR1 153 aa12.04□□□□□ -0.48
DDX1-201ENST00000233084 C17orf100A8MU93 164 aa12.04□□□□□ -0.48
DDX1-201ENST00000233084 IGHV4-39P01824 125 aa12.04□□□□□ -0.48
DDX1-201ENST00000233084 ORMDL2Q53FV1 153 aa12.04□□□□□ -0.48
DDX1-201ENST00000233084 C8orf31Q8N9H6 132 aa12.04□□□□□ -0.48
DDX1-201ENST00000233084 IGHV7-4-1A0A0J9YVY3 117 aa12.03□□□□□ -0.48
DDX1-201ENST00000233084 IGHV3-30P01768 117 aa12.03□□□□□ -0.48
DDX1-201ENST00000233084 IGHV3-30-5P0DP03 117 aa12.03□□□□□ -0.48
DDX1-201ENST00000233084 TNFRSF18Q9Y5U5 241 aa12.03□□□□□ -0.48
DDX1-201ENST00000233084 C11orf86A6NJI1 115 aa12.03□□□□□ -0.48
DDX1-201ENST00000233084 M0R381 172 aa12.03□□□□□ -0.48
DDX1-201ENST00000233084 MFAP4P55083 255 aa12.03□□□□□ -0.48
DDX1-201ENST00000233084 SRSF2Q01130 221 aaKnown RBP12.03□□□□□ -0.48
DDX1-201ENST00000233084 CENPVL3A0A0U1RRI6 287 aa12.02□□□□□ -0.48
DDX1-201ENST00000233084 B9A039 149 aa12.02□□□□□ -0.48
DDX1-201ENST00000233084 TMEM178BH3BS89 294 aa12.02□□□□□ -0.48
DDX1-201ENST00000233084 ELANEP08246 267 aa12.02□□□□□ -0.48
DDX1-201ENST00000233084 SUMO2P61956 95 aaKnown RBP12.02□□□□□ -0.48
DDX1-201ENST00000233084 ODF3Q96PU9 254 aa12.02□□□□□ -0.48
DDX1-201ENST00000233084 RAB1BQ9H0U4 201 aa12.02□□□□□ -0.48
DDX1-201ENST00000233084 TRAV8-4A0A0B4J246 113 aa12.02□□□□□ -0.49
DDX1-201ENST00000233084 BUB1B-PAK6H3BSN5 160 aa12.02□□□□□ -0.49
DDX1-201ENST00000233084 TSPEAR-AS2P59090 65 aa12.02□□□□□ -0.49
DDX1-201ENST00000233084 Q1RN00 199 aa12.02□□□□□ -0.49
DDX1-201ENST00000233084 ID1P41134 155 aa12.02□□□□□ -0.49
DDX1-201ENST00000233084 F8W735 103 aaPredicted RBP12.01□□□□□ -0.49
DDX1-201ENST00000233084 CHCHD5Q9BSY4 110 aa12.01□□□□□ -0.49
DDX1-201ENST00000233084 PPDPFQ9H3Y8 114 aa12.01□□□□□ -0.49
DDX1-201ENST00000233084 DUSP14O95147 198 aaKnown RBP12.01□□□□□ -0.49
DDX1-201ENST00000233084 MGPP08493 103 aa12.01□□□□□ -0.49
DDX1-201ENST00000233084 TMEM170BQ5T4T1 132 aa12.01□□□□□ -0.49
DDX1-201ENST00000233084 AGPAT4-IT1Q9H0P7 198 aa12.01□□□□□ -0.49
DDX1-201ENST00000233084 A4D1N5 150 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms