RNA–Protein interactions for RNA: ENST00000232165.7

UBE3A-201, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-201ENST00000232165 DKK2Q9UBU2 259 aa13.74□□□□□ -0.21
UBE3A-201ENST00000232165 PRSS29PA6NIE9 313 aa13.74□□□□□ -0.21
UBE3A-201ENST00000232165 GAGE12HA6NDE8 117 aa13.74□□□□□ -0.21
UBE3A-201ENST00000232165 PRO1854Q9UHT4 67 aa13.74□□□□□ -0.21
UBE3A-201ENST00000232165 CGB3P0DN86 165 aa13.73□□□□□ -0.21
UBE3A-201ENST00000232165 CGB7P0DN87 165 aa13.73□□□□□ -0.21
UBE3A-201ENST00000232165 H3BMM0 161 aa13.73□□□□□ -0.21
UBE3A-201ENST00000232165 C9orf153Q5TBE3 101 aa13.73□□□□□ -0.21
UBE3A-201ENST00000232165 UBE2WQ96B02 151 aa13.73□□□□□ -0.21
UBE3A-201ENST00000232165 IGKV1OR2-108A0A075B7D4 117 aa13.73□□□□□ -0.21
UBE3A-201ENST00000232165 WISP2O76076 250 aa13.73□□□□□ -0.21
UBE3A-201ENST00000232165 PFN2P35080 140 aa13.73□□□□□ -0.21
UBE3A-201ENST00000232165 C9orf47Q6ZRZ4 202 aa13.73□□□□□ -0.21
UBE3A-201ENST00000232165 IGHG2P01859 326 aa13.72□□□□□ -0.21
UBE3A-201ENST00000232165 RMI2Q96E14 147 aa13.72□□□□□ -0.21
UBE3A-201ENST00000232165 NCKAP5O14513 1909 aa13.72□□□□□ -0.21
UBE3A-201ENST00000232165 SLURP1P55000 103 aa13.72□□□□□ -0.21
UBE3A-201ENST00000232165 GPHB5Q86YW7 130 aa13.72□□□□□ -0.21
UBE3A-201ENST00000232165 DEFB136Q30KP8 78 aa13.72□□□□□ -0.21
UBE3A-201ENST00000232165 KIAA1549LQ6ZVL6 1849 aa13.71□□□□□ -0.21
UBE3A-201ENST00000232165 NOP10Q9NPE3 64 aaKnown RBP13.71□□□□□ -0.21
UBE3A-201ENST00000232165 FSTL3O95633 263 aa13.71□□□□□ -0.21
UBE3A-201ENST00000232165 MED14OSP0DP75 135 aa13.71□□□□□ -0.22
UBE3A-201ENST00000232165 TRAV13-2A0A0B4J235 113 aa13.7□□□□□ -0.22
UBE3A-201ENST00000232165 C9orf66Q5T8R8 295 aa13.7□□□□□ -0.22
UBE3A-201ENST00000232165 GAGE2AQ6NT46 116 aa13.7□□□□□ -0.22
UBE3A-201ENST00000232165 KMT2EQ8IZD2 1858 aa13.7□□□□□ -0.22
UBE3A-201ENST00000232165 E7EUB6 86 aa13.69□□□□□ -0.22
UBE3A-201ENST00000232165 FGF6P10767 208 aa13.69□□□□□ -0.22
UBE3A-201ENST00000232165 Q71RC1 249 aaPredicted RBP13.69□□□□□ -0.22
UBE3A-201ENST00000232165 DENND4AQ7Z401 1863 aa13.69□□□□□ -0.22
UBE3A-201ENST00000232165 C16orf74Q96GX8 76 aa13.69□□□□□ -0.22
UBE3A-201ENST00000232165 MRPL36Q9P0J6 103 aaKnown RBP13.69□□□□□ -0.22
UBE3A-201ENST00000232165 TRAV25A0A0B4J276 109 aa13.68□□□□□ -0.22
UBE3A-201ENST00000232165 SOCS3O14543 225 aa13.68□□□□□ -0.22
UBE3A-201ENST00000232165 SUMO4Q6EEV6 95 aa13.68□□□□□ -0.22
UBE3A-201ENST00000232165 CDPF1Q6NVV7 123 aa13.68□□□□□ -0.22
UBE3A-201ENST00000232165 ANGP03950 147 aaKnown RBP13.68□□□□□ -0.22
UBE3A-201ENST00000232165 GATA1P15976 413 aaPredicted RBP13.67□□□□□ -0.22
UBE3A-201ENST00000232165 DEFB125Q8N687 156 aa13.67□□□□□ -0.22
UBE3A-201ENST00000232165 C2orf70A6NJV1 201 aa13.67□□□□□ -0.22
UBE3A-201ENST00000232165 IFITM1P13164 125 aa13.67□□□□□ -0.22
UBE3A-201ENST00000232165 NKAPP1Q8N9T2 125 aa13.67□□□□□ -0.22
UBE3A-201ENST00000232165 FANCD2OSQ96PS1 177 aa13.67□□□□□ -0.22
UBE3A-201ENST00000232165 TEX48A0A1B0GUV7 120 aa13.67□□□□□ -0.22
UBE3A-201ENST00000232165 CTRLP40313 264 aa13.67□□□□□ -0.22
UBE3A-201ENST00000232165 CRIP3Q6Q6R5 217 aa13.67□□□□□ -0.22
UBE3A-201ENST00000232165 GTSF1Q8WW33 167 aa13.67□□□□□ -0.22
UBE3A-201ENST00000232165 IGHV4OR15-8A0A075B7B6 117 aa13.66□□□□□ -0.22
UBE3A-201ENST00000232165 A0A087WW49 117 aa13.66□□□□□ -0.22
UBE3A-201ENST00000232165 LINC01545Q5VT33 79 aa13.66□□□□□ -0.22
UBE3A-201ENST00000232165 ADAMTS9Q9P2N4 1935 aa13.66□□□□□ -0.22
UBE3A-201ENST00000232165 ODF3BA8MYP8 253 aa13.66□□□□□ -0.22
UBE3A-201ENST00000232165 APRG1Q8IVJ8 170 aa13.66□□□□□ -0.22
UBE3A-201ENST00000232165 FAM208BQ5VWN6 2430 aa13.66□□□□□ -0.22
UBE3A-201ENST00000232165 PRB1P04280 392 aa13.66□□□□□ -0.22
UBE3A-201ENST00000232165 A6NDX4 124 aa13.65□□□□□ -0.22
UBE3A-201ENST00000232165 PRAC2D3DTV9 90 aa13.65□□□□□ -0.22
UBE3A-201ENST00000232165 H3BMG7 143 aa13.65□□□□□ -0.22
UBE3A-201ENST00000232165 HERV-K104P63124 156 aa13.65□□□□□ -0.22
UBE3A-201ENST00000232165 MSRB1Q9NZV6 116 aa13.65□□□□□ -0.22
UBE3A-201ENST00000232165 PROP1O75360 226 aa13.65□□□□□ -0.22
UBE3A-201ENST00000232165 RPL39LQ96EH5 51 aaKnown RBP13.65□□□□□ -0.22
UBE3A-201ENST00000232165 C12orf74Q32Q52 190 aa13.64□□□□□ -0.23
UBE3A-201ENST00000232165 UTF1Q5T230 341 aa13.64□□□□□ -0.23
UBE3A-201ENST00000232165 Q6ZPA2 131 aa13.64□□□□□ -0.23
UBE3A-201ENST00000232165 PRSS47A8MTI9 375 aa13.64□□□□□ -0.23
UBE3A-201ENST00000232165 CDK2AP2O75956 126 aa13.64□□□□□ -0.23
UBE3A-201ENST00000232165 NXPH4O95158 308 aa13.64□□□□□ -0.23
UBE3A-201ENST00000232165 NCOA6Q14686 2063 aaPredicted RBP13.64□□□□□ -0.23
UBE3A-201ENST00000232165 ZFP2Q6ZN57 461 aa13.64□□□□□ -0.23
UBE3A-201ENST00000232165 FREM1Q5H8C1 2179 aa13.64□□□□□ -0.23
UBE3A-201ENST00000232165 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.63□□□□□ -0.23
UBE3A-201ENST00000232165 IGKV1D-37A0A075B6S9 117 aa13.63□□□□□ -0.23
UBE3A-201ENST00000232165 IGKV2-29A2NJV5 120 aaPredicted RBP13.63□□□□□ -0.23
UBE3A-201ENST00000232165 SLC25A29Q8N8R3 303 aa13.63□□□□□ -0.23
UBE3A-201ENST00000232165 DAZ2Q13117 558 aaKnown RBP13.63□□□□□ -0.23
UBE3A-201ENST00000232165 DAZ4Q86SG3 579 aaKnown RBP13.63□□□□□ -0.23
UBE3A-201ENST00000232165 DAZ3Q9NR90 486 aaKnown RBP13.63□□□□□ -0.23
UBE3A-201ENST00000232165 RNASE13Q5GAN3 156 aaKnown RBP13.63□□□□□ -0.23
UBE3A-201ENST00000232165 C10orf142B7Z368 130 aa13.63□□□□□ -0.23
UBE3A-201ENST00000232165 K7EQD1 137 aa13.63□□□□□ -0.23
UBE3A-201ENST00000232165 TNFRSF13BO14836 293 aaPredicted RBP13.63□□□□□ -0.23
UBE3A-201ENST00000232165 CCL25O15444 150 aa13.63□□□□□ -0.23
UBE3A-201ENST00000232165 BRWD1-AS2P59051 145 aa13.62□□□□□ -0.23
UBE3A-201ENST00000232165 LMO4P61968 165 aa13.62□□□□□ -0.23
UBE3A-201ENST00000232165 SH2D6Q7Z4S9 175 aa13.62□□□□□ -0.23
UBE3A-201ENST00000232165 C19orf71A6NCJ1 209 aa13.62□□□□□ -0.23
UBE3A-201ENST00000232165 MYCNOSP40205 109 aa13.62□□□□□ -0.23
UBE3A-201ENST00000232165 NUPR1O60356 82 aa13.62□□□□□ -0.23
UBE3A-201ENST00000232165 C4orf3Q8WVX3 66 aa13.62□□□□□ -0.23
UBE3A-201ENST00000232165 PRORYQ9H606 182 aa13.61□□□□□ -0.23
UBE3A-201ENST00000232165 ANKHD1Q8IWZ3 2542 aaKnown RBP13.61□□□□□ -0.23
UBE3A-201ENST00000232165 BDP1A6H8Y1 2624 aa13.61□□□□□ -0.23
UBE3A-201ENST00000232165 LOXL1Q08397 574 aaPredicted RBP13.61□□□□□ -0.23
UBE3A-201ENST00000232165 NRGNQ92686 78 aa13.61□□□□□ -0.23
UBE3A-201ENST00000232165 SPANXCQ9NY87 97 aa13.61□□□□□ -0.23
UBE3A-201ENST00000232165 TRAV12-1A0A0B4J245 112 aa13.61□□□□□ -0.23
UBE3A-201ENST00000232165 PCP2Q8IVA1 136 aa13.61□□□□□ -0.23
UBE3A-201ENST00000232165 EIF4EBP1Q13541 118 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms