RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 SMAD5-AS1Q9Y6J3 95 aa10.31□□□□□ -0.76
COL1A1-201ENST00000225964 ZFP36P26651 326 aaKnown RBP10.31□□□□□ -0.76
COL1A1-201ENST00000225964 CRYBA4P53673 196 aa10.31□□□□□ -0.76
COL1A1-201ENST00000225964 CITED1Q99966 193 aa10.31□□□□□ -0.76
COL1A1-201ENST00000225964 GATA1P15976 413 aaPredicted RBP10.31□□□□□ -0.76
COL1A1-201ENST00000225964 K7EN84 100 aa10.31□□□□□ -0.76
COL1A1-201ENST00000225964 DOCK9Q9BZ29 2069 aa10.3□□□□□ -0.76
COL1A1-201ENST00000225964 NUP210Q8TEM1 1887 aaPredicted RBP10.3□□□□□ -0.76
COL1A1-201ENST00000225964 SEM1Q6ZVN7 128 aa10.3□□□□□ -0.76
COL1A1-201ENST00000225964 KIF26AQ9ULI4 1882 aaPredicted RBP10.3□□□□□ -0.76
COL1A1-201ENST00000225964 DOCK11Q5JSL3 2073 aa10.3□□□□□ -0.76
COL1A1-201ENST00000225964 A0A1W2PPM0 123 aa10.3□□□□□ -0.76
COL1A1-201ENST00000225964 IGHG2P01859 326 aa10.3□□□□□ -0.76
COL1A1-201ENST00000225964 RSPO1Q2MKA7 263 aaPredicted RBP10.3□□□□□ -0.76
COL1A1-201ENST00000225964 DOCK8Q8NF50 2099 aa10.3□□□□□ -0.76
COL1A1-201ENST00000225964 C2orf70A6NJV1 201 aa10.29□□□□□ -0.76
COL1A1-201ENST00000225964 K7EP34 96 aa10.29□□□□□ -0.76
COL1A1-201ENST00000225964 C11orf52Q96A22 123 aa10.29□□□□□ -0.76
COL1A1-201ENST00000225964 RLFQ13129 1914 aa10.29□□□□□ -0.76
COL1A1-201ENST00000225964 C16orf54Q6UWD8 224 aa10.29□□□□□ -0.76
COL1A1-201ENST00000225964 SPTA1P02549 2419 aa10.29□□□□□ -0.76
COL1A1-201ENST00000225964 NDUFA1O15239 70 aa10.29□□□□□ -0.76
COL1A1-201ENST00000225964 IGLL1P15814 213 aa10.29□□□□□ -0.76
COL1A1-201ENST00000225964 MYCNOSP40205 109 aa10.29□□□□□ -0.76
COL1A1-201ENST00000225964 C1orf147Q96MC9 270 aaPredicted RBP10.29□□□□□ -0.76
COL1A1-201ENST00000225964 C11orf53Q8IXP5 236 aa10.29□□□□□ -0.76
COL1A1-201ENST00000225964 H3BMG7 143 aa10.29□□□□□ -0.76
COL1A1-201ENST00000225964 C12orf74Q32Q52 190 aa10.28□□□□□ -0.76
COL1A1-201ENST00000225964 RBM3P98179 157 aaKnown RBP10.28□□□□□ -0.76
COL1A1-201ENST00000225964 ZFP2Q6ZN57 461 aa10.28□□□□□ -0.76
COL1A1-201ENST00000225964 SND1-IT1Q9HBX3 110 aa10.28□□□□□ -0.76
COL1A1-201ENST00000225964 LENEPQ9Y5L5 61 aa10.28□□□□□ -0.76
COL1A1-201ENST00000225964 VSIG2Q96IQ7 327 aa10.27□□□□□ -0.76
COL1A1-201ENST00000225964 PRSS47A8MTI9 375 aa10.27□□□□□ -0.77
COL1A1-201ENST00000225964 HEATR5AQ86XA9 2040 aa10.27□□□□□ -0.77
COL1A1-201ENST00000225964 I3L2K1 104 aa10.27□□□□□ -0.77
COL1A1-201ENST00000225964 WFDC9Q8NEX5 89 aa10.27□□□□□ -0.77
COL1A1-201ENST00000225964 ANAPC1Q9H1A4 1944 aa10.27□□□□□ -0.77
COL1A1-201ENST00000225964 POU2AF1Q16633 256 aa10.27□□□□□ -0.77
COL1A1-201ENST00000225964 C20orf144Q9BQM9 153 aa10.27□□□□□ -0.77
COL1A1-201ENST00000225964 CFC1BP0CG36 223 aa10.26□□□□□ -0.77
COL1A1-201ENST00000225964 CFC1P0CG37 223 aa10.26□□□□□ -0.77
COL1A1-201ENST00000225964 ETDBQ3ZM63 59 aa10.26□□□□□ -0.77
COL1A1-201ENST00000225964 PRR20EP86478 221 aa10.26□□□□□ -0.77
COL1A1-201ENST00000225964 PRR20CP86479 221 aa10.26□□□□□ -0.77
COL1A1-201ENST00000225964 PRR20DP86480 221 aa10.26□□□□□ -0.77
COL1A1-201ENST00000225964 PRR20BP86481 221 aa10.26□□□□□ -0.77
COL1A1-201ENST00000225964 PRR20AP86496 221 aa10.26□□□□□ -0.77
COL1A1-201ENST00000225964 NTN5Q8WTR8 489 aaPredicted RBP10.26□□□□□ -0.77
COL1A1-201ENST00000225964 K7EMI3 77 aa10.26□□□□□ -0.77
COL1A1-201ENST00000225964 Q8N9W7 124 aa10.26□□□□□ -0.77
COL1A1-201ENST00000225964 Q8N1Y9 231 aa10.26□□□□□ -0.77
COL1A1-201ENST00000225964 C14orf132Q9NPU4 83 aa10.26□□□□□ -0.77
COL1A1-201ENST00000225964 CACNA1EQ15878 2313 aa10.26□□□□□ -0.77
COL1A1-201ENST00000225964 IGLV11-55A0A075B6I3 123 aa10.26□□□□□ -0.77
COL1A1-201ENST00000225964 KLK12Q9UKR0 248 aa10.26□□□□□ -0.77
COL1A1-201ENST00000225964 PROP1O75360 226 aa10.25□□□□□ -0.77
COL1A1-201ENST00000225964 IGFL2Q6UWQ7 119 aa10.25□□□□□ -0.77
COL1A1-201ENST00000225964 IL17DQ8TAD2 202 aa10.25□□□□□ -0.77
COL1A1-201ENST00000225964 TRBV7-3A0A075B6L6 115 aa10.25□□□□□ -0.77
COL1A1-201ENST00000225964 DNAJC9-AS1A6NH13 148 aa10.24□□□□□ -0.77
COL1A1-201ENST00000225964 WFDC11Q8NEX6 87 aa10.24□□□□□ -0.77
COL1A1-201ENST00000225964 Q8NFD4 153 aa10.24□□□□□ -0.77
COL1A1-201ENST00000225964 SPTBN2O15020 2390 aa10.24□□□□□ -0.77
COL1A1-201ENST00000225964 NDUFS6O75380 124 aaKnown RBP10.24□□□□□ -0.77
COL1A1-201ENST00000225964 TMEM258P61165 79 aa10.24□□□□□ -0.77
COL1A1-201ENST00000225964 K7EIM0 57 aa10.24□□□□□ -0.77
COL1A1-201ENST00000225964 RNF183Q96D59 192 aa10.24□□□□□ -0.77
COL1A1-201ENST00000225964 B9D2Q9BPU9 175 aa10.24□□□□□ -0.77
COL1A1-201ENST00000225964 SIVA1O15304 175 aa10.24□□□□□ -0.77
COL1A1-201ENST00000225964 IGLV3-1P01715 115 aa10.24□□□□□ -0.77
COL1A1-201ENST00000225964 SPANXDQ9BXN6 97 aa10.24□□□□□ -0.77
COL1A1-201ENST00000225964 DEFB125Q8N687 156 aa10.23□□□□□ -0.77
COL1A1-201ENST00000225964 DAND5Q8N907 189 aa10.23□□□□□ -0.77
COL1A1-201ENST00000225964 COL6A6A6NMZ7 2263 aa10.23□□□□□ -0.77
COL1A1-201ENST00000225964 ABCA4P78363 2273 aa10.23□□□□□ -0.77
COL1A1-201ENST00000225964 LRCOL1A6NCL2 159 aa10.23□□□□□ -0.77
COL1A1-201ENST00000225964 BAALCQ8WXS3 180 aa10.23□□□□□ -0.77
COL1A1-201ENST00000225964 ADAMTS9Q9P2N4 1935 aa10.23□□□□□ -0.77
COL1A1-201ENST00000225964 AKAP6Q13023 2319 aa10.23□□□□□ -0.77
COL1A1-201ENST00000225964 EML6Q6ZMW3 1958 aa10.23□□□□□ -0.77
COL1A1-201ENST00000225964 K7EP13 123 aa10.23□□□□□ -0.77
COL1A1-201ENST00000225964 OPRPNQ99935 248 aaPredicted RBP10.23□□□□□ -0.77
COL1A1-201ENST00000225964 FAM186AA6NE01 2351 aa10.23□□□□□ -0.77
COL1A1-201ENST00000225964 DAZAP2Q15038 168 aaPredicted RBP10.23□□□□□ -0.77
COL1A1-201ENST00000225964 NREPQ16612 68 aa10.23□□□□□ -0.77
COL1A1-201ENST00000225964 MUSTN1Q8IVN3 82 aa10.23□□□□□ -0.77
COL1A1-201ENST00000225964 C11orf45Q8TAV5 145 aa10.23□□□□□ -0.77
COL1A1-201ENST00000225964 GTSF1Q8WW33 167 aa10.23□□□□□ -0.77
COL1A1-201ENST00000225964 IGF2-ASQ6U949 168 aa10.22□□□□□ -0.77
COL1A1-201ENST00000225964 POLEQ07864 2286 aa10.22□□□□□ -0.77
COL1A1-201ENST00000225964 H0Y9J4 135 aa10.22□□□□□ -0.77
COL1A1-201ENST00000225964 SPAG11BQ08648 103 aa10.22□□□□□ -0.77
COL1A1-201ENST00000225964 DOCK10Q96BY6 2186 aa10.22□□□□□ -0.77
COL1A1-201ENST00000225964 CTSGP08311 255 aa10.22□□□□□ -0.77
COL1A1-201ENST00000225964 DENND4AQ7Z401 1863 aa10.22□□□□□ -0.77
COL1A1-201ENST00000225964 MP68P56378 58 aa10.21□□□□□ -0.77
COL1A1-201ENST00000225964 GPHB5Q86YW7 130 aa10.21□□□□□ -0.77
COL1A1-201ENST00000225964 PCP2Q8IVA1 136 aa10.21□□□□□ -0.77
COL1A1-201ENST00000225964 A0A0J9YXV3 536 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms