RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 PRSS29PA6NIE9 313 aa13.99□□□□□ -0.17
CACTIN-201ENST00000221899 RRN3P1Q2M238 152 aa13.99□□□□□ -0.17
CACTIN-201ENST00000221899 WFDC12Q8WWY7 111 aa13.99□□□□□ -0.17
CACTIN-201ENST00000221899 LENEPQ9Y5L5 61 aa13.99□□□□□ -0.17
CACTIN-201ENST00000221899 FAM223BA6NKX1 122 aa13.98□□□□□ -0.17
CACTIN-201ENST00000221899 FAM223AQ8IWN6 122 aa13.98□□□□□ -0.17
CACTIN-201ENST00000221899 C20orf78Q9BR46 151 aa13.98□□□□□ -0.17
CACTIN-201ENST00000221899 F8W1H4 67 aa13.98□□□□□ -0.17
CACTIN-201ENST00000221899 TSSC4Q9Y5U2 329 aaPredicted RBP13.98□□□□□ -0.17
CACTIN-201ENST00000221899 SOCS3O14543 225 aa13.97□□□□□ -0.17
CACTIN-201ENST00000221899 SFTA2Q6UW10 78 aa13.97□□□□□ -0.17
CACTIN-201ENST00000221899 OVOL1O14753 267 aa13.97□□□□□ -0.17
CACTIN-201ENST00000221899 DUSP14O95147 198 aaKnown RBP13.97□□□□□ -0.17
CACTIN-201ENST00000221899 SLC25A16P16260 332 aa13.97□□□□□ -0.17
CACTIN-201ENST00000221899 PLEKHB2Q96CS7 222 aa13.97□□□□□ -0.17
CACTIN-201ENST00000221899 VPS13CQ709C8 3753 aa13.97□□□□□ -0.17
CACTIN-201ENST00000221899 ZNF815PA8K554 130 aa13.96□□□□□ -0.17
CACTIN-201ENST00000221899 RNASE3P12724 160 aaKnown RBP13.96□□□□□ -0.17
CACTIN-201ENST00000221899 C19orf54Q5BKX5 351 aa13.96□□□□□ -0.17
CACTIN-201ENST00000221899 CD300EQ496F6 205 aaPredicted RBP13.96□□□□□ -0.17
CACTIN-201ENST00000221899 SAMD13Q5VXD3 122 aa13.96□□□□□ -0.17
CACTIN-201ENST00000221899 SCGB1D4Q6XE38 83 aa13.96□□□□□ -0.17
CACTIN-201ENST00000221899 KLHL30-AS1Q8NEE0 82 aa13.96□□□□□ -0.17
CACTIN-201ENST00000221899 JPT2Q9H910 190 aa13.96□□□□□ -0.17
CACTIN-201ENST00000221899 GAGE13Q4V321 117 aa13.95□□□□□ -0.18
CACTIN-201ENST00000221899 AZU1P20160 251 aa13.95□□□□□ -0.18
CACTIN-201ENST00000221899 PGPEP1Q9NXJ5 209 aa13.95□□□□□ -0.18
CACTIN-201ENST00000221899 COL12A1Q99715 3063 aa13.95□□□□□ -0.18
CACTIN-201ENST00000221899 NDUFA4O00483 81 aa13.94□□□□□ -0.18
CACTIN-201ENST00000221899 EDN2P20800 178 aa13.94□□□□□ -0.18
CACTIN-201ENST00000221899 SMAGPQ0VAQ4 97 aa13.94□□□□□ -0.18
CACTIN-201ENST00000221899 MORN3Q6PF18 240 aaPredicted RBP13.94□□□□□ -0.18
CACTIN-201ENST00000221899 MUC4Q99102 2169 aa13.94□□□□□ -0.18
CACTIN-201ENST00000221899 HOXA3O43365 443 aaPredicted RBP13.94□□□□□ -0.18
CACTIN-201ENST00000221899 INSL3P51460 131 aa13.94□□□□□ -0.18
CACTIN-201ENST00000221899 ABCA2Q9BZC7 2435 aa13.94□□□□□ -0.18
CACTIN-201ENST00000221899 PF4V1P10720 104 aa13.94□□□□□ -0.18
CACTIN-201ENST00000221899 SPAG8Q99932 426 aaPredicted RBP13.93□□□□□ -0.18
CACTIN-201ENST00000221899 MRPL16Q9NX20 251 aaKnown RBP13.93□□□□□ -0.18
CACTIN-201ENST00000221899 SRSF9Q13242 221 aaKnown RBP eCLIP13.93□□□□□ -0.18
CACTIN-201ENST00000221899 A0A087WWL8 130 aa13.92□□□□□ -0.18
CACTIN-201ENST00000221899 RHPN1-AS1Q9BWJ2 59 aa13.92□□□□□ -0.18
CACTIN-201ENST00000221899 TP53TG1Q9Y2A0 90 aa13.92□□□□□ -0.18
CACTIN-201ENST00000221899 A0A1B0GWB2 263 aa13.92□□□□□ -0.18
CACTIN-201ENST00000221899 GAGE12HA6NDE8 117 aa13.92□□□□□ -0.18
CACTIN-201ENST00000221899 CRYGDP07320 174 aa13.92□□□□□ -0.18
CACTIN-201ENST00000221899 Q6ZS46 218 aa13.92□□□□□ -0.18
CACTIN-201ENST00000221899 PRO0461Q9UI25 63 aa13.92□□□□□ -0.18
CACTIN-201ENST00000221899 C11orf86A6NJI1 115 aa13.91□□□□□ -0.18
CACTIN-201ENST00000221899 RPL39P62891 51 aaKnown RBP13.91□□□□□ -0.18
CACTIN-201ENST00000221899 FAM19A4Q96LR4 140 aa13.91□□□□□ -0.18
CACTIN-201ENST00000221899 MAP1AP78559 2803 aaPredicted RBP13.91□□□□□ -0.18
CACTIN-201ENST00000221899 IGHV1-69DA0A0B4J2H0 117 aa13.91□□□□□ -0.18
CACTIN-201ENST00000221899 LINC01549A6NIU2 74 aa13.91□□□□□ -0.18
CACTIN-201ENST00000221899 TSHBP01222 138 aa13.91□□□□□ -0.18
CACTIN-201ENST00000221899 IGHV1-69P01742 117 aa13.91□□□□□ -0.18
CACTIN-201ENST00000221899 SIGMAR1Q99720 223 aa13.91□□□□□ -0.18
CACTIN-201ENST00000221899 F5H697 171 aa13.9□□□□□ -0.18
CACTIN-201ENST00000221899 BLCAPP62952 87 aa13.9□□□□□ -0.18
CACTIN-201ENST00000221899 LINC01619G3V211 115 aa13.89□□□□□ -0.19
CACTIN-201ENST00000221899 C19orf84I3L1E1 186 aa13.89□□□□□ -0.19
CACTIN-201ENST00000221899 IGHV4-38-2P0DP08 117 aa13.89□□□□□ -0.19
CACTIN-201ENST00000221899 J3QR89 54 aa13.89□□□□□ -0.19
CACTIN-201ENST00000221899 APOMO95445 188 aa13.89□□□□□ -0.19
CACTIN-201ENST00000221899 LINC00315P59091 139 aa13.89□□□□□ -0.19
CACTIN-201ENST00000221899 ATP6V0BQ99437 205 aa13.89□□□□□ -0.19
CACTIN-201ENST00000221899 IGLV4-69A0A075B6H9 119 aa13.88□□□□□ -0.19
CACTIN-201ENST00000221899 LOC107984156A0A0G2JMH3 177 aa13.88□□□□□ -0.19
CACTIN-201ENST00000221899 H3BUX3 64 aa13.88□□□□□ -0.19
CACTIN-201ENST00000221899 IGHV4-39P01824 125 aa13.88□□□□□ -0.19
CACTIN-201ENST00000221899 COX6B1P14854 86 aa13.88□□□□□ -0.19
CACTIN-201ENST00000221899 ARL17AQ8IVW1 177 aa13.88□□□□□ -0.19
CACTIN-201ENST00000221899 LY6DQ14210 128 aa13.88□□□□□ -0.19
CACTIN-201ENST00000221899 SUMO4Q6EEV6 95 aa13.88□□□□□ -0.19
CACTIN-201ENST00000221899 KIF25-AS1Q9Y6Z4 181 aa13.88□□□□□ -0.19
CACTIN-201ENST00000221899 MED14OSP0DP75 135 aa13.88□□□□□ -0.19
CACTIN-201ENST00000221899 CRIP2P52943 208 aaPredicted RBP13.88□□□□□ -0.19
CACTIN-201ENST00000221899 FAM74A4Q5TZK3 123 aa13.88□□□□□ -0.19
CACTIN-201ENST00000221899 FAM159AQ6UWV7 190 aa13.88□□□□□ -0.19
CACTIN-201ENST00000221899 ZFP2Q6ZN57 461 aa13.88□□□□□ -0.19
CACTIN-201ENST00000221899 TRAV12-3A0A0B4J271 114 aa13.87□□□□□ -0.19
CACTIN-201ENST00000221899 CD7P09564 240 aa13.87□□□□□ -0.19
CACTIN-201ENST00000221899 PSMB2P49721 201 aa13.86□□□□□ -0.19
CACTIN-201ENST00000221899 IGHV4-61A0A0C4DH41 118 aa13.86□□□□□ -0.19
CACTIN-201ENST00000221899 TSPAN13O95857 204 aa13.86□□□□□ -0.19
CACTIN-201ENST00000221899 PPP1R17O96001 155 aa13.86□□□□□ -0.19
CACTIN-201ENST00000221899 IGKV3-20P01619 116 aa13.86□□□□□ -0.19
CACTIN-201ENST00000221899 APRG1Q8IVJ8 170 aa13.86□□□□□ -0.19
CACTIN-201ENST00000221899 TMEM238LA0A1B0GVL6 79 aa13.85□□□□□ -0.19
CACTIN-201ENST00000221899 A6NJY4 79 aa13.85□□□□□ -0.19
CACTIN-201ENST00000221899 UCNP55089 124 aa13.85□□□□□ -0.19
CACTIN-201ENST00000221899 TMEM170BQ5T4T1 132 aa13.85□□□□□ -0.19
CACTIN-201ENST00000221899 USMG5Q96IX5 58 aa13.85□□□□□ -0.19
CACTIN-201ENST00000221899 IGIPA6NJ69 53 aa13.85□□□□□ -0.19
CACTIN-201ENST00000221899 TSPEAR-AS2P59090 65 aa13.85□□□□□ -0.19
CACTIN-201ENST00000221899 ZNF418Q8TF45 676 aaPredicted RBP13.84□□□□□ -0.19
CACTIN-201ENST00000221899 DAZ1Q9NQZ3 744 aaKnown RBP13.84□□□□□ -0.19
CACTIN-201ENST00000221899 ZNF256Q9Y2P7 627 aaPredicted RBP13.84□□□□□ -0.19
CACTIN-201ENST00000221899 NCOR2Q9Y618 2525 aa13.84□□□□□ -0.19
CACTIN-201ENST00000221899 SDHAF1A6NFY7 115 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms