RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 M0R381 172 aa12.78□□□□□ -0.36
RABGGTA-201ENST00000216840 CD300EQ496F6 205 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-201ENST00000216840 JMJD8Q96S16 334 aa12.78□□□□□ -0.36
RABGGTA-201ENST00000216840 MUC4Q99102 2169 aa12.78□□□□□ -0.36
RABGGTA-201ENST00000216840 GATA1P15976 413 aaPredicted RBP12.77□□□□□ -0.36
RABGGTA-201ENST00000216840 TNFRSF6BO95407 300 aa12.77□□□□□ -0.37
RABGGTA-201ENST00000216840 OTOGQ6ZRI0 2925 aa12.77□□□□□ -0.37
RABGGTA-201ENST00000216840 WNK1Q9H4A3 2382 aa12.76□□□□□ -0.37
RABGGTA-201ENST00000216840 KIR2DL5BA0A0G2JN68 375 aa12.76□□□□□ -0.37
RABGGTA-201ENST00000216840 KIR2DL5BA0A0G2JPC4 375 aa12.76□□□□□ -0.37
RABGGTA-201ENST00000216840 A8MTW9 85 aa12.76□□□□□ -0.37
RABGGTA-201ENST00000216840 HLA-DRB4P13762 266 aa12.76□□□□□ -0.37
RABGGTA-201ENST00000216840 DDTP30046 118 aa12.76□□□□□ -0.37
RABGGTA-201ENST00000216840 KIR2DL5AQ8N109 375 aa12.76□□□□□ -0.37
RABGGTA-201ENST00000216840 MAP1LC3AQ9H492 121 aa12.76□□□□□ -0.37
RABGGTA-201ENST00000216840 MAP6D1Q9H9H5 199 aa12.76□□□□□ -0.37
RABGGTA-201ENST00000216840 HLA-DRB4X5D2U9 266 aa12.76□□□□□ -0.37
RABGGTA-201ENST00000216840 PROK1P58294 105 aa12.76□□□□□ -0.37
RABGGTA-201ENST00000216840 ZNF124Q15973 351 aa12.76□□□□□ -0.37
RABGGTA-201ENST00000216840 TMEM70Q9BUB7 260 aa12.76□□□□□ -0.37
RABGGTA-201ENST00000216840 A0A096LNJ9 63 aa12.75□□□□□ -0.37
RABGGTA-201ENST00000216840 H3BMM0 161 aa12.75□□□□□ -0.37
RABGGTA-201ENST00000216840 NXPH4O95158 308 aa12.75□□□□□ -0.37
RABGGTA-201ENST00000216840 CD7P09564 240 aa12.75□□□□□ -0.37
RABGGTA-201ENST00000216840 SPATA12Q7Z6I5 190 aa12.75□□□□□ -0.37
RABGGTA-201ENST00000216840 SPAG8Q99932 426 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-201ENST00000216840 VAMP8Q9BV40 100 aa12.75□□□□□ -0.37
RABGGTA-201ENST00000216840 SETD2Q9BYW2 2564 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-201ENST00000216840 TRAV26-2A0A0B4J265 109 aa12.74□□□□□ -0.37
RABGGTA-201ENST00000216840 OR4C46A6NHA9 309 aa12.74□□□□□ -0.37
RABGGTA-201ENST00000216840 NRACQ8N912 160 aa12.74□□□□□ -0.37
RABGGTA-201ENST00000216840 OR2K2Q8NGT1 345 aa12.74□□□□□ -0.37
RABGGTA-201ENST00000216840 ZNF256Q9Y2P7 627 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-201ENST00000216840 TRAV25A0A0B4J276 109 aa12.74□□□□□ -0.37
RABGGTA-201ENST00000216840 CRXO43186 299 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-201ENST00000216840 HSPB8Q9UJY1 196 aa12.74□□□□□ -0.37
RABGGTA-201ENST00000216840 IGHV1OR15-1A0A075B7D0 117 aa12.73□□□□□ -0.37
RABGGTA-201ENST00000216840 RBMY1BA6NDE4 496 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-201ENST00000216840 RBMY1EA6NEQ0 496 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-201ENST00000216840 LINC01546A6NGU7 62 aa12.73□□□□□ -0.37
RABGGTA-201ENST00000216840 ADARB2-AS1A8MUL3 147 aa12.73□□□□□ -0.37
RABGGTA-201ENST00000216840 INAFM1C9JVW0 142 aa12.73□□□□□ -0.37
RABGGTA-201ENST00000216840 SYS1-DBNDD2H3BUS1 97 aa12.73□□□□□ -0.37
RABGGTA-201ENST00000216840 RBMY1DP0C7P1 496 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-201ENST00000216840 FXYD7P58549 80 aa12.73□□□□□ -0.37
RABGGTA-201ENST00000216840 C14orf178Q8N769 122 aaPredicted RBP12.73□□□□□ -0.37
RABGGTA-201ENST00000216840 MRAP2Q96G30 205 aa12.73□□□□□ -0.37
RABGGTA-201ENST00000216840 DPH3P1Q9H4G8 78 aa12.73□□□□□ -0.37
RABGGTA-201ENST00000216840 PAM16Q9Y3D7 125 aa12.73□□□□□ -0.37
RABGGTA-201ENST00000216840 IGHV3-16A0A0C4DH30 117 aa12.73□□□□□ -0.37
RABGGTA-201ENST00000216840 C9orf85Q96MD7 179 aa12.72□□□□□ -0.37
RABGGTA-201ENST00000216840 C20orf144Q9BQM9 153 aa12.72□□□□□ -0.37
RABGGTA-201ENST00000216840 NXT2Q9NPJ8 142 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-201ENST00000216840 Q8N1Y9 231 aa12.71□□□□□ -0.37
RABGGTA-201ENST00000216840 AP1S3Q96PC3 154 aa12.71□□□□□ -0.37
RABGGTA-201ENST00000216840 ZNF747Q9BV97 191 aa12.71□□□□□ -0.37
RABGGTA-201ENST00000216840 MAP1LC3CQ9BXW4 147 aa12.71□□□□□ -0.37
RABGGTA-201ENST00000216840 MDFICQ9P1T7 246 aa12.71□□□□□ -0.37
RABGGTA-201ENST00000216840 SETXQ7Z333 2677 aaKnown RBP12.71□□□□□ -0.38
RABGGTA-201ENST00000216840 PRSS47A8MTI9 375 aa12.71□□□□□ -0.38
RABGGTA-201ENST00000216840 RBMY1A1P0DJD3 496 aaKnown RBP12.71□□□□□ -0.38
RABGGTA-201ENST00000216840 RBMY1CP0DJD4 496 aa12.71□□□□□ -0.38
RABGGTA-201ENST00000216840 RBMY1FQ15415 496 aaKnown RBP12.71□□□□□ -0.38
RABGGTA-201ENST00000216840 ATOH7Q8N100 152 aa12.71□□□□□ -0.38
RABGGTA-201ENST00000216840 DEFB125Q8N687 156 aa12.71□□□□□ -0.38
RABGGTA-201ENST00000216840 IGLV2-18A0A075B6J9 118 aa12.7□□□□□ -0.38
RABGGTA-201ENST00000216840 Q8N8P6 123 aa12.7□□□□□ -0.38
RABGGTA-201ENST00000216840 HBDP02042 147 aa12.69□□□□□ -0.38
RABGGTA-201ENST00000216840 NSUN5P1Q3KNT7 163 aa12.69□□□□□ -0.38
RABGGTA-201ENST00000216840 ODF3L2Q3SX64 289 aa12.69□□□□□ -0.38
RABGGTA-201ENST00000216840 KIF25-AS1Q9Y6Z4 181 aa12.69□□□□□ -0.38
RABGGTA-201ENST00000216840 KRTAP10-3P60369 221 aa12.69□□□□□ -0.38
RABGGTA-201ENST00000216840 DEFA6Q01524 100 aa12.69□□□□□ -0.38
RABGGTA-201ENST00000216840 PET117Q6UWS5 81 aa12.69□□□□□ -0.38
RABGGTA-201ENST00000216840 POM121L12Q8N7R1 296 aa12.69□□□□□ -0.38
RABGGTA-201ENST00000216840 MGPP08493 103 aa12.68□□□□□ -0.38
RABGGTA-201ENST00000216840 CTAG1AP78358 180 aa12.68□□□□□ -0.38
RABGGTA-201ENST00000216840 SPATA45Q537H7 98 aa12.68□□□□□ -0.38
RABGGTA-201ENST00000216840 LINC00315P59091 139 aa12.68□□□□□ -0.38
RABGGTA-201ENST00000216840 RASL10AQ92737 203 aa12.68□□□□□ -0.38
RABGGTA-201ENST00000216840 C14orf144Q96I85 54 aa12.68□□□□□ -0.38
RABGGTA-201ENST00000216840 NDUFAF3Q9BU61 184 aa12.68□□□□□ -0.38
RABGGTA-201ENST00000216840 JPT2Q9H910 190 aa12.68□□□□□ -0.38
RABGGTA-201ENST00000216840 MAJINQ3KP22 176 aa12.67□□□□□ -0.38
RABGGTA-201ENST00000216840 C20orf202A1L168 122 aa12.66□□□□□ -0.38
RABGGTA-201ENST00000216840 FOSL1P15407 271 aa12.66□□□□□ -0.38
RABGGTA-201ENST00000216840 NSD1Q96L73 2696 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-201ENST00000216840 TRGV11A0A075B6L2 103 aa12.66□□□□□ -0.38
RABGGTA-201ENST00000216840 TRAV9-2A0A087WT02 112 aa12.66□□□□□ -0.38
RABGGTA-201ENST00000216840 H0Y8G0 127 aa12.66□□□□□ -0.38
RABGGTA-201ENST00000216840 SAP30O75446 220 aa12.66□□□□□ -0.38
RABGGTA-201ENST00000216840 FCER1GP30273 86 aa12.66□□□□□ -0.38
RABGGTA-201ENST00000216840 MCRIP2Q9BUT9 160 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-201ENST00000216840 CBY3A6NI87 242 aa12.65□□□□□ -0.38
RABGGTA-201ENST00000216840 SMIM17P0DL12 118 aa12.65□□□□□ -0.38
RABGGTA-201ENST00000216840 LINC01545Q5VT33 79 aa12.65□□□□□ -0.38
RABGGTA-201ENST00000216840 ZNF705AQ6ZN79 300 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-201ENST00000216840 RPL39LQ96EH5 51 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-201ENST00000216840 CLUHP3Q96NS8 147 aa12.65□□□□□ -0.38
RABGGTA-201ENST00000216840 SYT8Q8NBV8 401 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms