RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 ARL2-SNX15V9GYD0 113 aa14.86□□□□□ -0.03
VTI1B-201ENST00000216456 IGHV3-30P01768 117 aa14.85□□□□□ -0.03
VTI1B-201ENST00000216456 IGHV3-33P01772 117 aa14.85□□□□□ -0.03
VTI1B-201ENST00000216456 IGHV3-30-3P0DP02 117 aa14.85□□□□□ -0.03
VTI1B-201ENST00000216456 IGHV3-30-5P0DP03 117 aa14.85□□□□□ -0.03
VTI1B-201ENST00000216456 OR2T35Q8NGX2 323 aa14.85□□□□□ -0.03
VTI1B-201ENST00000216456 Q9HAA7 133 aa14.85□□□□□ -0.03
VTI1B-201ENST00000216456 A0A1W2PRE2 83 aa14.84□□□□□ -0.03
VTI1B-201ENST00000216456 TIRAPP58753 221 aa14.84□□□□□ -0.03
VTI1B-201ENST00000216456 ZFP69Q49AA0 526 aa14.84□□□□□ -0.03
VTI1B-201ENST00000216456 OR10J3Q5JRS4 329 aa14.84□□□□□ -0.03
VTI1B-201ENST00000216456 PRADC1Q9BSG0 188 aa14.84□□□□□ -0.03
VTI1B-201ENST00000216456 TRBV6-4A0A1B0GX49 114 aa14.83□□□□□ -0.04
VTI1B-201ENST00000216456 IFNA7P01567 189 aa14.83□□□□□ -0.04
VTI1B-201ENST00000216456 RHOHQ15669 191 aa14.83□□□□□ -0.04
VTI1B-201ENST00000216456 LINC01556Q5JQF7 62 aa14.83□□□□□ -0.04
VTI1B-201ENST00000216456 CDPF1Q6NVV7 123 aa14.83□□□□□ -0.04
VTI1B-201ENST00000216456 SAMD10Q9BYL1 202 aa14.83□□□□□ -0.04
VTI1B-201ENST00000216456 BORCS7-ASMTA0A0B4J1R7 106 aa14.82□□□□□ -0.04
VTI1B-201ENST00000216456 CTXND1A0A1B0GTU2 59 aa14.82□□□□□ -0.04
VTI1B-201ENST00000216456 LRCOL1A6NCL2 159 aa14.82□□□□□ -0.04
VTI1B-201ENST00000216456 SMLR1H3BR10 107 aa14.82□□□□□ -0.04
VTI1B-201ENST00000216456 PEX7O00628 323 aa14.82□□□□□ -0.04
VTI1B-201ENST00000216456 CRIP1P50238 77 aa14.82□□□□□ -0.04
VTI1B-201ENST00000216456 SAPCD1Q5SSQ6 148 aa14.82□□□□□ -0.04
VTI1B-201ENST00000216456 SH2D6Q7Z4S9 175 aa14.82□□□□□ -0.04
VTI1B-201ENST00000216456 Q86TA4 180 aa14.82□□□□□ -0.04
VTI1B-201ENST00000216456 PARLQ9H300 379 aa14.82□□□□□ -0.04
VTI1B-201ENST00000216456 GAGE12JA6NER3 117 aa14.81□□□□□ -0.04
VTI1B-201ENST00000216456 FAM74A7A6NL05 159 aa14.81□□□□□ -0.04
VTI1B-201ENST00000216456 GAGE1Q13065 139 aa14.81□□□□□ -0.04
VTI1B-201ENST00000216456 GAGE4Q13068 117 aa14.81□□□□□ -0.04
VTI1B-201ENST00000216456 GAGE5Q13069 117 aa14.81□□□□□ -0.04
VTI1B-201ENST00000216456 GAGE13Q4V321 117 aa14.81□□□□□ -0.04
VTI1B-201ENST00000216456 C10orf126Q8N4M7 172 aa14.81□□□□□ -0.04
VTI1B-201ENST00000216456 CYTL1Q9NRR1 136 aa14.81□□□□□ -0.04
VTI1B-201ENST00000216456 IBA57-AS1B1ANH7 110 aa14.8□□□□□ -0.04
VTI1B-201ENST00000216456 K7EP13 123 aa14.8□□□□□ -0.04
VTI1B-201ENST00000216456 M0R036 132 aa14.8□□□□□ -0.04
VTI1B-201ENST00000216456 LGALSLQ3ZCW2 172 aaPredicted RBP14.8□□□□□ -0.04
VTI1B-201ENST00000216456 ATP6V0E2Q8NHE4 81 aa14.8□□□□□ -0.04
VTI1B-201ENST00000216456 PTH2Q96A98 100 aa14.8□□□□□ -0.04
VTI1B-201ENST00000216456 ZC2HC1AQ96GY0 325 aa14.8□□□□□ -0.04
VTI1B-201ENST00000216456 TRAV8-6A0A0B4J262 113 aa14.79□□□□□ -0.04
VTI1B-201ENST00000216456 GRIFINA4D1Z8 144 aa14.79□□□□□ -0.04
VTI1B-201ENST00000216456 EPM2AB3EWF7 344 aa14.79□□□□□ -0.04
VTI1B-201ENST00000216456 H3BVH4 76 aa14.79□□□□□ -0.04
VTI1B-201ENST00000216456 SMR3BP02814 79 aaPredicted RBP14.79□□□□□ -0.04
VTI1B-201ENST00000216456 S100A4P26447 101 aaKnown RBP14.79□□□□□ -0.04
VTI1B-201ENST00000216456 LELP1Q5T871 98 aa14.79□□□□□ -0.04
VTI1B-201ENST00000216456 C14orf178Q8N769 122 aaPredicted RBP14.79□□□□□ -0.04
VTI1B-201ENST00000216456 GTSF1LQ9H1H1 148 aa14.79□□□□□ -0.04
VTI1B-201ENST00000216456 ARPC5O15511 151 aa14.78□□□□□ -0.04
VTI1B-201ENST00000216456 PSCAO43653 123 aa14.78□□□□□ -0.04
VTI1B-201ENST00000216456 MGST1P10620 155 aaKnown RBP14.78□□□□□ -0.04
VTI1B-201ENST00000216456 ASIPP42127 132 aa14.78□□□□□ -0.04
VTI1B-201ENST00000216456 FHITP49789 147 aa14.78□□□□□ -0.04
VTI1B-201ENST00000216456 AKR1C8PQ5T2L2 129 aa14.78□□□□□ -0.04
VTI1B-201ENST00000216456 DMRTA1Q5VZB9 504 aa14.78□□□□□ -0.04
VTI1B-201ENST00000216456 VPS13BQ7Z7G8 4022 aa14.77□□□□□ -0.04
VTI1B-201ENST00000216456 FABP5P3A8MUU1 101 aa14.77□□□□□ -0.05
VTI1B-201ENST00000216456 B4DEV8 164 aa14.77□□□□□ -0.05
VTI1B-201ENST00000216456 LINC00694P0DN24 101 aa14.77□□□□□ -0.05
VTI1B-201ENST00000216456 GCSHP23434 173 aa14.77□□□□□ -0.05
VTI1B-201ENST00000216456 WFDC2Q14508 124 aa14.77□□□□□ -0.05
VTI1B-201ENST00000216456 UFSP1Q6NVU6 142 aa14.77□□□□□ -0.05
VTI1B-201ENST00000216456 TMSB15BA0A087X1C1 80 aa14.76□□□□□ -0.05
VTI1B-201ENST00000216456 MAP1LC3B2A6NCE7 125 aa14.76□□□□□ -0.05
VTI1B-201ENST00000216456 SH2D1AO60880 128 aa14.76□□□□□ -0.05
VTI1B-201ENST00000216456 MAP1LC3BQ9GZQ8 125 aa14.76□□□□□ -0.05
VTI1B-201ENST00000216456 KRBOX1C9JBD0 128 aa14.75□□□□□ -0.05
VTI1B-201ENST00000216456 CIDEAO60543 219 aa14.75□□□□□ -0.05
VTI1B-201ENST00000216456 ARMS2P0C7Q2 107 aa14.75□□□□□ -0.05
VTI1B-201ENST00000216456 Q5VSD8 79 aa14.75□□□□□ -0.05
VTI1B-201ENST00000216456 HERC1Q15751 4861 aa14.74□□□□□ -0.05
VTI1B-201ENST00000216456 IGLV5-52A0A0A0MRZ9 124 aa14.74□□□□□ -0.05
VTI1B-201ENST00000216456 IL36BQ9NZH7 164 aa14.74□□□□□ -0.05
VTI1B-201ENST00000216456 DNAH8Q96JB1 4490 aa14.73□□□□□ -0.05
VTI1B-201ENST00000216456 A8MWV9 139 aa14.73□□□□□ -0.05
VTI1B-201ENST00000216456 ZFP2Q6ZN57 461 aa14.73□□□□□ -0.05
VTI1B-201ENST00000216456 DAZ4Q86SG3 579 aaKnown RBP14.73□□□□□ -0.05
VTI1B-201ENST00000216456 HIST1H2BAQ96A08 127 aa14.73□□□□□ -0.05
VTI1B-201ENST00000216456 DAZ3Q9NR90 486 aaKnown RBP14.73□□□□□ -0.05
VTI1B-201ENST00000216456 A0A087WWL8 130 aa14.72□□□□□ -0.05
VTI1B-201ENST00000216456 A0A1B0GV50 99 aa14.72□□□□□ -0.05
VTI1B-201ENST00000216456 FAM74A4Q5TZK3 123 aa14.72□□□□□ -0.05
VTI1B-201ENST00000216456 Q8N814 137 aa14.72□□□□□ -0.05
VTI1B-201ENST00000216456 DNAJC30Q96LL9 226 aa14.72□□□□□ -0.05
VTI1B-201ENST00000216456 LECT2O14960 151 aa14.71□□□□□ -0.05
VTI1B-201ENST00000216456 CST9LP1Q5W188 147 aa14.71□□□□□ -0.05
VTI1B-201ENST00000216456 FAM30AQ9NZY2 134 aa14.71□□□□□ -0.05
VTI1B-201ENST00000216456 INAFM2P0DMQ5 153 aa14.7□□□□□ -0.06
VTI1B-201ENST00000216456 RGS21Q2M5E4 152 aa14.7□□□□□ -0.06
VTI1B-201ENST00000216456 M0R381 172 aa14.69□□□□□ -0.06
VTI1B-201ENST00000216456 UBE2G1P62253 170 aa14.69□□□□□ -0.06
VTI1B-201ENST00000216456 ZNF674Q2M3X9 581 aa14.69□□□□□ -0.06
VTI1B-201ENST00000216456 FAM162BQ5T6X4 162 aa14.69□□□□□ -0.06
VTI1B-201ENST00000216456 COX8CQ7Z4L0 72 aa14.69□□□□□ -0.06
VTI1B-201ENST00000216456 FMC1Q96HJ9 113 aa14.69□□□□□ -0.06
VTI1B-201ENST00000216456 PAGE4O60829 102 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms