RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 PRSS57Q6UWY2 283 aa15.59■□□□□ 0.09
CACNA1A-257ENST00000638009 ICOSQ9Y6W8 199 aa15.59■□□□□ 0.09
CACNA1A-257ENST00000638009 LINC01619G3V211 115 aa15.58■□□□□ 0.08
CACNA1A-257ENST00000638009 ITGBL1O95965 494 aaPredicted RBP15.58■□□□□ 0.08
CACNA1A-257ENST00000638009 RPL18AQ02543 176 aaKnown RBP15.58■□□□□ 0.08
CACNA1A-257ENST00000638009 IGHV1-46P01743 117 aa15.58■□□□□ 0.08
CACNA1A-257ENST00000638009 DUX4L9Q6RFH8 374 aaPredicted RBP15.58■□□□□ 0.08
CACNA1A-257ENST00000638009 DYNAPQ8N1N2 210 aa15.58■□□□□ 0.08
CACNA1A-257ENST00000638009 NTN5Q8WTR8 489 aaPredicted RBP15.57■□□□□ 0.08
CACNA1A-257ENST00000638009 TRBV12-3P01733 135 aa15.57■□□□□ 0.08
CACNA1A-257ENST00000638009 NTF4P34130 210 aa15.57■□□□□ 0.08
CACNA1A-257ENST00000638009 SPINK13Q1W4C9 94 aa15.57■□□□□ 0.08
CACNA1A-257ENST00000638009 ZNF672Q499Z4 452 aaPredicted RBP15.57■□□□□ 0.08
CACNA1A-257ENST00000638009 LAIR2Q6ISS4 152 aa15.57■□□□□ 0.08
CACNA1A-257ENST00000638009 ZNRF2Q8NHG8 242 aa15.57■□□□□ 0.08
CACNA1A-257ENST00000638009 COX7B2Q8TF08 81 aa15.57■□□□□ 0.08
CACNA1A-257ENST00000638009 TRAV3A0A0B4J244 114 aa15.57■□□□□ 0.08
CACNA1A-257ENST00000638009 NDUFC2-KCTD14E9PQ53 114 aa15.57■□□□□ 0.08
CACNA1A-257ENST00000638009 MRPL53Q96EL3 112 aaKnown RBP15.57■□□□□ 0.08
CACNA1A-257ENST00000638009 TEX22C9J3V5 150 aa15.56■□□□□ 0.08
CACNA1A-257ENST00000638009 Q6ZWC4 215 aa15.56■□□□□ 0.08
CACNA1A-257ENST00000638009 LENEPQ9Y5L5 61 aa15.56■□□□□ 0.08
CACNA1A-257ENST00000638009 DEFB131AP59861 70 aa15.56■□□□□ 0.08
CACNA1A-257ENST00000638009 C9orf47Q6ZRZ4 202 aa15.56■□□□□ 0.08
CACNA1A-257ENST00000638009 ATP6V0E2Q8NHE4 81 aa15.56■□□□□ 0.08
CACNA1A-257ENST00000638009 IGHV1-18A0A0C4DH31 117 aa15.56■□□□□ 0.08
CACNA1A-257ENST00000638009 LYRM9A8MSI8 78 aa15.56■□□□□ 0.08
CACNA1A-257ENST00000638009 K7ERJ3 54 aa15.56■□□□□ 0.08
CACNA1A-257ENST00000638009 NDUFA4O00483 81 aa15.56■□□□□ 0.08
CACNA1A-257ENST00000638009 LTAP01374 205 aa15.56■□□□□ 0.08
CACNA1A-257ENST00000638009 C9orf106Q8NAJ2 232 aa15.55■□□□□ 0.08
CACNA1A-257ENST00000638009 TRAV12-2A0A075B6T6 113 aa15.55■□□□□ 0.08
CACNA1A-257ENST00000638009 C8orf86Q6ZUL3 223 aa15.55■□□□□ 0.08
CACNA1A-257ENST00000638009 IGHV1-69DA0A0B4J2H0 117 aa15.55■□□□□ 0.08
CACNA1A-257ENST00000638009 C5orf63A6NC05 138 aa15.55■□□□□ 0.08
CACNA1A-257ENST00000638009 CSRP2Q16527 193 aa15.55■□□□□ 0.08
CACNA1A-257ENST00000638009 CR1LQ2VPA4 569 aa15.55■□□□□ 0.08
CACNA1A-257ENST00000638009 Q9H8V8 135 aa15.55■□□□□ 0.08
CACNA1A-257ENST00000638009 LINC00527Q9UJ94 153 aa15.55■□□□□ 0.08
CACNA1A-257ENST00000638009 XCL1P47992 114 aa15.55■□□□□ 0.08
CACNA1A-257ENST00000638009 C15orf62A8K5M9 175 aa15.54■□□□□ 0.08
CACNA1A-257ENST00000638009 CFHR1Q03591 330 aa15.54■□□□□ 0.08
CACNA1A-257ENST00000638009 ZFP36L1Q07352 338 aaKnown RBP15.54■□□□□ 0.08
CACNA1A-257ENST00000638009 IGKV2D-24A0A075B6R9 120 aa15.54■□□□□ 0.08
CACNA1A-257ENST00000638009 J3QRE1 110 aa15.54■□□□□ 0.08
CACNA1A-257ENST00000638009 WDR90Q96KV7 1748 aa15.54■□□□□ 0.08
CACNA1A-257ENST00000638009 REG4Q9BYZ8 158 aa15.54■□□□□ 0.08
CACNA1A-257ENST00000638009 C17orf77Q96MU5 243 aa15.54■□□□□ 0.08
CACNA1A-257ENST00000638009 IGF2BP2-AS1Q96M15 143 aa15.54■□□□□ 0.08
CACNA1A-257ENST00000638009 SAA4P35542 130 aa15.54■□□□□ 0.08
CACNA1A-257ENST00000638009 RBAKDNA6NC62 111 aa15.53■□□□□ 0.08
CACNA1A-257ENST00000638009 ATP5EP2Q5VTU8 51 aa15.53■□□□□ 0.08
CACNA1A-257ENST00000638009 XCL2Q9UBD3 114 aa15.53■□□□□ 0.08
CACNA1A-257ENST00000638009 Q71RC1 249 aaPredicted RBP15.53■□□□□ 0.08
CACNA1A-257ENST00000638009 MST1LQ2TV78 715 aa15.53■□□□□ 0.08
CACNA1A-257ENST00000638009 FN1P02751 2386 aaKnown RBP15.52■□□□□ 0.08
CACNA1A-257ENST00000638009 ZNF462Q96JM2 2506 aa15.52■□□□□ 0.08
CACNA1A-257ENST00000638009 IGKV1-9A0A0C4DH69 117 aa15.52■□□□□ 0.07
CACNA1A-257ENST00000638009 PRB4P10163 310 aaPredicted RBP15.52■□□□□ 0.07
CACNA1A-257ENST00000638009 IGHV2-70DA0A0C4DH43 119 aa15.52■□□□□ 0.07
CACNA1A-257ENST00000638009 CRYGBP07316 175 aa15.52■□□□□ 0.07
CACNA1A-257ENST00000638009 IGLL1P15814 213 aa15.52■□□□□ 0.07
CACNA1A-257ENST00000638009 FOXF2Q12947 444 aa15.52■□□□□ 0.07
CACNA1A-257ENST00000638009 C10orf105Q8TEF2 133 aa15.52■□□□□ 0.07
CACNA1A-257ENST00000638009 SND1-IT1Q9HBX3 110 aa15.52■□□□□ 0.07
CACNA1A-257ENST00000638009 PRDM6Q9NQX0 595 aa15.52■□□□□ 0.07
CACNA1A-257ENST00000638009 C3orf22Q8N5N4 141 aa15.51■□□□□ 0.07
CACNA1A-257ENST00000638009 FOXE3Q13461 319 aa15.51■□□□□ 0.07
CACNA1A-257ENST00000638009 WFDC11Q8NEX6 87 aa15.51■□□□□ 0.07
CACNA1A-257ENST00000638009 PRR25Q96S07 402 aa15.51■□□□□ 0.07
CACNA1A-257ENST00000638009 TNS1Q9HBL0 1735 aaKnown RBP15.51■□□□□ 0.07
CACNA1A-257ENST00000638009 COX7A2LO14548 114 aa15.51■□□□□ 0.07
CACNA1A-257ENST00000638009 H3BT86 120 aa15.51■□□□□ 0.07
CACNA1A-257ENST00000638009 TM2D2Q9BX73 214 aa15.51■□□□□ 0.07
CACNA1A-257ENST00000638009 TRBV19A0A075B6N1 114 aa15.5■□□□□ 0.07
CACNA1A-257ENST00000638009 IGHV4-28A0A0C4DH34 117 aa15.5■□□□□ 0.07
CACNA1A-257ENST00000638009 CPAMD8Q8IZJ3 1885 aa15.5■□□□□ 0.07
CACNA1A-257ENST00000638009 H0Y9J4 135 aa15.5■□□□□ 0.07
CACNA1A-257ENST00000638009 DEFB104AQ8WTQ1 72 aa15.5■□□□□ 0.07
CACNA1A-257ENST00000638009 C20orf173Q96LM9 149 aa15.5■□□□□ 0.07
CACNA1A-257ENST00000638009 CYTL1Q9NRR1 136 aa15.5■□□□□ 0.07
CACNA1A-257ENST00000638009 UQCRQO14949 82 aa15.5■□□□□ 0.07
CACNA1A-257ENST00000638009 C8orf49Q96NF6 230 aa15.49■□□□□ 0.07
CACNA1A-257ENST00000638009 IGHV3-16A0A0C4DH30 117 aa15.49■□□□□ 0.07
CACNA1A-257ENST00000638009 SHISA3A0PJX4 238 aa15.49■□□□□ 0.07
CACNA1A-257ENST00000638009 IGLC7A0M8Q6 106 aa15.49■□□□□ 0.07
CACNA1A-257ENST00000638009 LYZL4Q96KX0 146 aa15.49■□□□□ 0.07
CACNA1A-257ENST00000638009 IGLV3-12A0A075B6K2 115 aa15.48■□□□□ 0.07
CACNA1A-257ENST00000638009 TIMM17AQ99595 171 aa15.48■□□□□ 0.07
CACNA1A-257ENST00000638009 FAM110DQ8TAY7 271 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-257ENST00000638009 WIPF2Q8TF74 440 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-257ENST00000638009 RS1O15537 224 aa15.48■□□□□ 0.07
CACNA1A-257ENST00000638009 NDUFS7O75251 213 aa15.48■□□□□ 0.07
CACNA1A-257ENST00000638009 EIF4EBP2Q13542 120 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-257ENST00000638009 IGKV1D-43A0A0B4J1Z2 117 aa15.48■□□□□ 0.07
CACNA1A-257ENST00000638009 PAQR4Q8N4S7 273 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-257ENST00000638009 OVOL3O00110 214 aa15.47■□□□□ 0.07
CACNA1A-257ENST00000638009 CFHR3Q02985 330 aa15.47■□□□□ 0.07
CACNA1A-257ENST00000638009 TMEM213A2RRL7 107 aa15.47■□□□□ 0.07
CACNA1A-257ENST00000638009 TMEM61Q8N0U2 210 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms